RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 HDGFL1Q5TGJ6 251 aa20.5■□□□□ 0.87
PRKCSH-217ENST00000592741 SLIT3O75094 1523 aa20.49■□□□□ 0.87
PRKCSH-217ENST00000592741 LMO7Q8WWI1 1683 aa20.48■□□□□ 0.87
PRKCSH-217ENST00000592741 RGPD2P0DJD1 1756 aa20.48■□□□□ 0.87
PRKCSH-217ENST00000592741 SDSP20132 328 aa20.48■□□□□ 0.87
PRKCSH-217ENST00000592741 KDM3BQ7LBC6 1761 aa20.47■□□□□ 0.87
PRKCSH-217ENST00000592741 MCM4P33991 863 aa20.47■□□□□ 0.87
PRKCSH-217ENST00000592741 CHMP4AQ9BY43 222 aa20.47■□□□□ 0.87
PRKCSH-217ENST00000592741 DDIT3P35638 169 aa20.46■□□□□ 0.87
PRKCSH-217ENST00000592741 PLEKHO1Q53GL0 409 aaPredicted RBP20.46■□□□□ 0.87
PRKCSH-217ENST00000592741 ORAI2Q96SN7 254 aa20.46■□□□□ 0.87
PRKCSH-217ENST00000592741 OSBPL3Q9H4L5 887 aa20.46■□□□□ 0.87
PRKCSH-217ENST00000592741 CIZ1Q9ULV3 898 aaPredicted RBP20.46■□□□□ 0.87
PRKCSH-217ENST00000592741 HOXB7P09629 217 aa20.45■□□□□ 0.86
PRKCSH-217ENST00000592741 AKAP4Q5JQC9 854 aa20.45■□□□□ 0.86
PRKCSH-217ENST00000592741 K7ELQ4 463 aaPredicted RBP20.45■□□□□ 0.86
PRKCSH-217ENST00000592741 GCP02774 474 aa20.45■□□□□ 0.86
PRKCSH-217ENST00000592741 ATP8B2P98198 1209 aa20.45■□□□□ 0.86
PRKCSH-217ENST00000592741 ZNF530Q6P9A1 599 aaPredicted RBP20.45■□□□□ 0.86
PRKCSH-217ENST00000592741 EIF4A1P60842 406 aaKnown RBP20.44■□□□□ 0.86
PRKCSH-217ENST00000592741 AMOTQ4VCS5 1084 aa20.44■□□□□ 0.86
PRKCSH-217ENST00000592741 ARHGEF25Q86VW2 580 aa20.44■□□□□ 0.86
PRKCSH-217ENST00000592741 LRRC59Q96AG4 307 aaKnown RBP20.44■□□□□ 0.86
PRKCSH-217ENST00000592741 LGR6Q9HBX8 967 aa20.44■□□□□ 0.86
PRKCSH-217ENST00000592741 EXOC6BQ9Y2D4 811 aa20.44■□□□□ 0.86
PRKCSH-217ENST00000592741 RABEP1Q15276 862 aa20.44■□□□□ 0.86
PRKCSH-217ENST00000592741 NCAPD2Q15021 1401 aa20.43■□□□□ 0.86
PRKCSH-217ENST00000592741 HSP90AA1P07900 732 aaKnown RBP20.43■□□□□ 0.86
PRKCSH-217ENST00000592741 PDE1AP54750 535 aa20.43■□□□□ 0.86
PRKCSH-217ENST00000592741 TEFQ10587 303 aa20.43■□□□□ 0.86
PRKCSH-217ENST00000592741 USP26Q9BXU7 913 aa20.43■□□□□ 0.86
PRKCSH-217ENST00000592741 LRRCC1Q9C099 1032 aa20.43■□□□□ 0.86
PRKCSH-217ENST00000592741 KIF1AQ12756 1690 aa20.43■□□□□ 0.86
PRKCSH-217ENST00000592741 TRPM3Q9HCF6 1732 aaPredicted RBP20.43■□□□□ 0.86
PRKCSH-217ENST00000592741 XPCQ01831 940 aaPredicted RBP20.42■□□□□ 0.86
PRKCSH-217ENST00000592741 LRRFIP2Q9Y608 721 aaKnown RBP20.42■□□□□ 0.86
PRKCSH-217ENST00000592741 CD2BP2O95400 341 aaKnown RBP20.42■□□□□ 0.86
PRKCSH-217ENST00000592741 UBTFL1P0CB47 393 aaPredicted RBP20.42■□□□□ 0.86
PRKCSH-217ENST00000592741 RBM42Q9BTD8 480 aaKnown RBP20.42■□□□□ 0.86
PRKCSH-217ENST00000592741 IBTKQ9P2D0 1353 aaPredicted RBP20.41■□□□□ 0.86
PRKCSH-217ENST00000592741 PNMA6EA0A0J9YXQ4 647 aa20.41■□□□□ 0.86
PRKCSH-217ENST00000592741 EIF2S2P20042 333 aaKnown RBP20.41■□□□□ 0.86
PRKCSH-217ENST00000592741 LMOD2Q6P5Q4 547 aa20.41■□□□□ 0.86
PRKCSH-217ENST00000592741 PHAXQ9H814 394 aaKnown RBP20.41■□□□□ 0.86
PRKCSH-217ENST00000592741 REC8O95072 547 aa20.41■□□□□ 0.86
PRKCSH-217ENST00000592741 C1orf141Q5JVX7 400 aa20.41■□□□□ 0.86
PRKCSH-217ENST00000592741 PROSER2Q86WR7 435 aaPredicted RBP20.41■□□□□ 0.86
PRKCSH-217ENST00000592741 USP44Q9H0E7 712 aa20.41■□□□□ 0.86
PRKCSH-217ENST00000592741 OVOS2A0A0G2JMS6 1433 aa20.41■□□□□ 0.86
PRKCSH-217ENST00000592741 CAMTA1Q9Y6Y1 1673 aa20.4■□□□□ 0.86
PRKCSH-217ENST00000592741 BTBD11A6QL63 1104 aa20.4■□□□□ 0.86
PRKCSH-217ENST00000592741 ANKRD24Q8TF21 1146 aa20.4■□□□□ 0.86
PRKCSH-217ENST00000592741 DDX11L8A8MPP1 907 aa20.39■□□□□ 0.86
PRKCSH-217ENST00000592741 SRCIN1Q9C0H9 1055 aa20.39■□□□□ 0.86
PRKCSH-217ENST00000592741 SALL3Q9BXA9 1300 aa20.39■□□□□ 0.86
PRKCSH-217ENST00000592741 KRT28Q7Z3Y7 464 aa20.39■□□□□ 0.85
PRKCSH-217ENST00000592741 C1orf167Q5SNV9 1468 aa20.38■□□□□ 0.85
PRKCSH-217ENST00000592741 ERC2O15083 957 aa20.38■□□□□ 0.85
PRKCSH-217ENST00000592741 RNMTO43148 476 aaKnown RBP20.38■□□□□ 0.85
PRKCSH-217ENST00000592741 PLEKHG5O94827 1062 aa20.38■□□□□ 0.85
PRKCSH-217ENST00000592741 MPRIPQ6WCQ1 1025 aa20.38■□□□□ 0.85
PRKCSH-217ENST00000592741 PXDNQ92626 1479 aa20.38■□□□□ 0.85
PRKCSH-217ENST00000592741 MX1P20591 662 aa20.38■□□□□ 0.85
PRKCSH-217ENST00000592741 CHPF2Q9P2E5 772 aa20.38■□□□□ 0.85
PRKCSH-217ENST00000592741 KCNQ3O43525 872 aa20.36■□□□□ 0.85
PRKCSH-217ENST00000592741 RAB3GAP1Q15042 981 aa20.36■□□□□ 0.85
PRKCSH-217ENST00000592741 TUBGCP6Q96RT7 1819 aa20.36■□□□□ 0.85
PRKCSH-217ENST00000592741 SSH3Q8TE77 659 aa20.36■□□□□ 0.85
PRKCSH-217ENST00000592741 DNAAF4Q8WXU2 420 aa20.35■□□□□ 0.85
PRKCSH-217ENST00000592741 TNPO1Q92973 898 aaKnown RBP20.35■□□□□ 0.85
PRKCSH-217ENST00000592741 MST1RQ04912 1400 aa20.35■□□□□ 0.85
PRKCSH-217ENST00000592741 GBP4Q96PP9 640 aa20.35■□□□□ 0.85
PRKCSH-217ENST00000592741 C19orf44Q9H6X5 657 aa20.35■□□□□ 0.85
PRKCSH-217ENST00000592741 FOXD4L1Q9NU39 408 aa20.35■□□□□ 0.85
PRKCSH-217ENST00000592741 STAP2Q9UGK3 403 aa20.34■□□□□ 0.85
PRKCSH-217ENST00000592741 LMTK3Q96Q04 1460 aa20.34■□□□□ 0.85
PRKCSH-217ENST00000592741 AOX1Q06278 1338 aa20.33■□□□□ 0.85
PRKCSH-217ENST00000592741 TRAK2O60296 914 aa20.33■□□□□ 0.85
PRKCSH-217ENST00000592741 RAB11FIP3O75154 756 aa20.33■□□□□ 0.85
PRKCSH-217ENST00000592741 BEND3Q5T5X7 828 aa20.33■□□□□ 0.84
PRKCSH-217ENST00000592741 L1TD1Q5T7N2 865 aaKnown RBP20.33■□□□□ 0.84
PRKCSH-217ENST00000592741 BRPF3Q9ULD4 1205 aa20.33■□□□□ 0.84
PRKCSH-217ENST00000592741 ALS2Q96Q42 1657 aa20.32■□□□□ 0.84
PRKCSH-217ENST00000592741 PI4KAP2A4QPH2 592 aa20.32■□□□□ 0.84
PRKCSH-217ENST00000592741 ST18O60284 1047 aa20.32■□□□□ 0.84
PRKCSH-217ENST00000592741 POLA2Q14181 598 aa20.32■□□□□ 0.84
PRKCSH-217ENST00000592741 TSHZ3Q63HK5 1081 aa20.32■□□□□ 0.84
PRKCSH-217ENST00000592741 PPP1R42Q7Z4L9 355 aa20.32■□□□□ 0.84
PRKCSH-217ENST00000592741 PI4KAP1Q8N8J0 262 aa20.32■□□□□ 0.84
PRKCSH-217ENST00000592741 IL27Q8NEV9 243 aa20.32■□□□□ 0.84
PRKCSH-217ENST00000592741 DBF4Q9UBU7 674 aaPredicted RBP20.32■□□□□ 0.84
PRKCSH-217ENST00000592741 AXIN2Q9Y2T1 843 aa20.32■□□□□ 0.84
PRKCSH-217ENST00000592741 PTMSP20962 102 aa20.3■□□□□ 0.84
PRKCSH-217ENST00000592741 SIPA1L3O60292 1781 aaPredicted RBP20.3■□□□□ 0.84
PRKCSH-217ENST00000592741 ADCY9O60503 1353 aa20.3■□□□□ 0.84
PRKCSH-217ENST00000592741 RGPD5Q99666 1765 aa20.3■□□□□ 0.84
PRKCSH-217ENST00000592741 TRIM6-TRIM34B2RNG4 842 aa20.3■□□□□ 0.84
PRKCSH-217ENST00000592741 ESYT1Q9BSJ8 1104 aa20.3■□□□□ 0.84
PRKCSH-217ENST00000592741 ERBB3P21860 1342 aa20.29■□□□□ 0.84
PRKCSH-217ENST00000592741 SURF6O75683 361 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms