RNA–Protein interactions for RNA: ENST00000592647.1

TRAPPC6A-205, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2 BASIC

Gene TRAPPC6A, Length 514 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-205ENST00000592647 APAF1O14727 1248 aa28.3■■■□□ 2.12
TRAPPC6A-205ENST00000592647 NFE2L2Q16236 605 aa28.3■■■□□ 2.12
TRAPPC6A-205ENST00000592647 LRRC4BQ9NT99 713 aa28.3■■■□□ 2.12
TRAPPC6A-205ENST00000592647 SHANK3Q9BYB0 1731 aa28.29■■■□□ 2.12
TRAPPC6A-205ENST00000592647 TMPOP42166 694 aaKnown RBP28.28■■■□□ 2.12
TRAPPC6A-205ENST00000592647 MPRIPQ6WCQ1 1025 aa28.28■■■□□ 2.12
TRAPPC6A-205ENST00000592647 GNAT3A8MTJ3 354 aa28.27■■■□□ 2.12
TRAPPC6A-205ENST00000592647 RIPK4P57078 832 aa28.27■■■□□ 2.12
TRAPPC6A-205ENST00000592647 SLC27A3Q5K4L6 730 aa28.27■■■□□ 2.12
TRAPPC6A-205ENST00000592647 HSP90AB1P08238 724 aaKnown RBP28.25■■■□□ 2.11
TRAPPC6A-205ENST00000592647 NKX1-1Q15270 411 aaPredicted RBP28.25■■■□□ 2.11
TRAPPC6A-205ENST00000592647 SLC16A10Q8TF71 515 aa28.25■■■□□ 2.11
TRAPPC6A-205ENST00000592647 AKT1S1Q96B36 256 aa28.25■■■□□ 2.11
TRAPPC6A-205ENST00000592647 LGR6Q9HBX8 967 aa28.24■■■□□ 2.11
TRAPPC6A-205ENST00000592647 RTF1Q92541 710 aaKnown RBP28.23■■■□□ 2.11
TRAPPC6A-205ENST00000592647 DCAF5Q96JK2 942 aa28.23■■■□□ 2.11
TRAPPC6A-205ENST00000592647 SALL2Q9Y467 1007 aaPredicted RBP28.23■■■□□ 2.11
TRAPPC6A-205ENST00000592647 UTRNP46939 3433 aa28.22■■■□□ 2.11
TRAPPC6A-205ENST00000592647 RNMTO43148 476 aaKnown RBP28.21■■■□□ 2.11
TRAPPC6A-205ENST00000592647 POLD1P28340 1107 aa28.21■■■□□ 2.11
TRAPPC6A-205ENST00000592647 DCTN1Q14203 1278 aa28.21■■■□□ 2.11
TRAPPC6A-205ENST00000592647 MCM10Q7L590 875 aa28.21■■■□□ 2.11
TRAPPC6A-205ENST00000592647 SYTL4Q96C24 671 aaPredicted RBP28.21■■■□□ 2.11
TRAPPC6A-205ENST00000592647 GPR162Q16538 588 aa28.19■■■□□ 2.1
TRAPPC6A-205ENST00000592647 KLHL34Q8N239 644 aa28.19■■■□□ 2.1
TRAPPC6A-205ENST00000592647 IL17REQ8NFR9 667 aa28.19■■■□□ 2.1
TRAPPC6A-205ENST00000592647 PNPLA7Q6ZV29 1317 aa28.18■■■□□ 2.1
TRAPPC6A-205ENST00000592647 PRIM1P49642 420 aaKnown RBP28.18■■■□□ 2.1
TRAPPC6A-205ENST00000592647 TFCP2L1Q9NZI6 479 aa28.18■■■□□ 2.1
TRAPPC6A-205ENST00000592647 KDM6AO15550 1401 aaPredicted RBP28.18■■■□□ 2.1
TRAPPC6A-205ENST00000592647 HTATSF1O43719 755 aaKnown RBP28.17■■■□□ 2.1
TRAPPC6A-205ENST00000592647 LMOD3Q0VAK6 560 aa28.16■■■□□ 2.1
TRAPPC6A-205ENST00000592647 THUMPD2Q9BTF0 503 aaKnown RBP28.16■■■□□ 2.1
TRAPPC6A-205ENST00000592647 TRIM35Q9UPQ4 493 aa28.16■■■□□ 2.1
TRAPPC6A-205ENST00000592647 QSER1Q2KHR3 1735 aa28.15■■■□□ 2.1
TRAPPC6A-205ENST00000592647 CABP4P57796 275 aa28.15■■■□□ 2.1
TRAPPC6A-205ENST00000592647 ERVV-2B6SEH9 535 aa28.14■■■□□ 2.1
TRAPPC6A-205ENST00000592647 KCNQ4P56696 695 aa28.14■■■□□ 2.1
TRAPPC6A-205ENST00000592647 DLG5Q8TDM6 1919 aa28.14■■■□□ 2.09
TRAPPC6A-205ENST00000592647 TEFQ10587 303 aa28.12■■■□□ 2.09
TRAPPC6A-205ENST00000592647 NFATC2IPQ8NCF5 419 aa28.12■■■□□ 2.09
TRAPPC6A-205ENST00000592647 TMOD3Q9NYL9 352 aa28.12■■■□□ 2.09
TRAPPC6A-205ENST00000592647 DOT1LQ8TEK3 1739 aa28.12■■■□□ 2.09
TRAPPC6A-205ENST00000592647 C1QTNF8P60827 252 aa28.11■■■□□ 2.09
TRAPPC6A-205ENST00000592647 CHD4Q14839 1912 aa28.11■■■□□ 2.09
TRAPPC6A-205ENST00000592647 PELP1Q8IZL8 1130 aaKnown RBP28.1■■■□□ 2.09
TRAPPC6A-205ENST00000592647 SLC52A2Q9HAB3 445 aa28.1■■■□□ 2.09
TRAPPC6A-205ENST00000592647 CCNL1Q9UK58 526 aaPredicted RBP28.1■■■□□ 2.09
TRAPPC6A-205ENST00000592647 TOGARAM1Q9Y4F4 1720 aa28.09■■■□□ 2.09
TRAPPC6A-205ENST00000592647 PIGBQ92521 554 aa28.09■■■□□ 2.09
TRAPPC6A-205ENST00000592647 HNRNPUQ00839 825 aaKnown RBP eCLIP28.08■■■□□ 2.09
TRAPPC6A-205ENST00000592647 COL24A1Q17RW2 1714 aa28.08■■■□□ 2.09
TRAPPC6A-205ENST00000592647 SCN11AQ9UI33 1791 aa28.08■■■□□ 2.09
TRAPPC6A-205ENST00000592647 CEMIPQ8WUJ3 1361 aa28.08■■■□□ 2.09
TRAPPC6A-205ENST00000592647 KAT6BQ8WYB5 2073 aa28.07■■■□□ 2.08
TRAPPC6A-205ENST00000592647 CCDC27Q2M243 656 aa28.06■■■□□ 2.08
TRAPPC6A-205ENST00000592647 WWC1Q8IX03 1113 aa28.06■■■□□ 2.08
TRAPPC6A-205ENST00000592647 NLGN2Q8NFZ4 835 aa28.06■■■□□ 2.08
TRAPPC6A-205ENST00000592647 LY75O60449 1722 aa28.06■■■□□ 2.08
TRAPPC6A-205ENST00000592647 LAS1LQ9Y4W2 734 aaKnown RBP28.05■■■□□ 2.08
TRAPPC6A-205ENST00000592647 ADAMTS7Q9UKP4 1686 aa28.04■■■□□ 2.08
TRAPPC6A-205ENST00000592647 MSH5O43196 834 aa28.04■■■□□ 2.08
TRAPPC6A-205ENST00000592647 TAF7Q15545 349 aaPredicted RBP28.04■■■□□ 2.08
TRAPPC6A-205ENST00000592647 NCBP3Q53F19 620 aaKnown RBP28.04■■■□□ 2.08
TRAPPC6A-205ENST00000592647 NGEFQ8N5V2 710 aa28.04■■■□□ 2.08
TRAPPC6A-205ENST00000592647 TUBGCP6Q96RT7 1819 aa28.04■■■□□ 2.08
TRAPPC6A-205ENST00000592647 MIS18AQ9NYP9 233 aa28.03■■■□□ 2.08
TRAPPC6A-205ENST00000592647 VIRMAQ69YN4 1812 aaKnown RBP28.03■■■□□ 2.08
TRAPPC6A-205ENST00000592647 ITGB4P16144 1822 aa28.02■■■□□ 2.08
TRAPPC6A-205ENST00000592647 BTBD11A6QL63 1104 aa28.02■■■□□ 2.08
TRAPPC6A-205ENST00000592647 GIGYF1O75420 1035 aaPredicted RBP28.01■■■□□ 2.07
TRAPPC6A-205ENST00000592647 SLC39A6Q13433 755 aa28.01■■■□□ 2.07
TRAPPC6A-205ENST00000592647 ASAP1Q9ULH1 1129 aa28.01■■■□□ 2.07
TRAPPC6A-205ENST00000592647 CALD1Q05682 793 aaKnown RBP28■■■□□ 2.07
TRAPPC6A-205ENST00000592647 COL23A1Q86Y22 540 aaPredicted RBP28■■■□□ 2.07
TRAPPC6A-205ENST00000592647 ATG3Q9NT62 314 aa28■■■□□ 2.07
TRAPPC6A-205ENST00000592647 MRC1P22897 1456 aa28■■■□□ 2.07
TRAPPC6A-205ENST00000592647 YTHDC1Q96MU7 727 aaKnown RBP27.99■■■□□ 2.07
TRAPPC6A-205ENST00000592647 GRIN3BO60391 1043 aa27.98■■■□□ 2.07
TRAPPC6A-205ENST00000592647 HMGB2P26583 209 aaKnown RBP27.97■■■□□ 2.07
TRAPPC6A-205ENST00000592647 WDR63Q8IWG1 891 aa27.97■■■□□ 2.07
TRAPPC6A-205ENST00000592647 KCNQ3O43525 872 aa27.96■■■□□ 2.07
TRAPPC6A-205ENST00000592647 YBX3P16989 372 aaKnown RBP eCLIP27.95■■■□□ 2.06
TRAPPC6A-205ENST00000592647 MSL1Q68DK7 614 aa27.95■■■□□ 2.06
TRAPPC6A-205ENST00000592647 TTC5Q8N0Z6 440 aa27.95■■■□□ 2.06
TRAPPC6A-205ENST00000592647 SMARCC1Q92922 1105 aaPredicted RBP27.95■■■□□ 2.06
TRAPPC6A-205ENST00000592647 TSPYL4Q9UJ04 414 aa27.95■■■□□ 2.06
TRAPPC6A-205ENST00000592647 RBM42Q9BTD8 480 aaKnown RBP27.94■■■□□ 2.06
TRAPPC6A-205ENST00000592647 ZNF521Q96K83 1311 aa27.93■■■□□ 2.06
TRAPPC6A-205ENST00000592647 PTCD1O75127 700 aaKnown RBP27.93■■■□□ 2.06
TRAPPC6A-205ENST00000592647 GNAI1P63096 354 aa27.93■■■□□ 2.06
TRAPPC6A-205ENST00000592647 ZNF790Q6PG37 636 aa27.93■■■□□ 2.06
TRAPPC6A-205ENST00000592647 FLAD1Q8NFF5 587 aa27.93■■■□□ 2.06
TRAPPC6A-205ENST00000592647 CFAP44Q96MT7 982 aa27.93■■■□□ 2.06
TRAPPC6A-205ENST00000592647 PALLDQ8WX93 1383 aa27.93■■■□□ 2.06
TRAPPC6A-205ENST00000592647 SIPA1L3O60292 1781 aaPredicted RBP27.93■■■□□ 2.06
TRAPPC6A-205ENST00000592647 CHL1O00533 1208 aa27.92■■■□□ 2.06
TRAPPC6A-205ENST00000592647 IFT57Q9NWB7 429 aa27.92■■■□□ 2.06
TRAPPC6A-205ENST00000592647 GOLGB1Q14789 3259 aaKnown RBP27.92■■■□□ 2.06
TRAPPC6A-205ENST00000592647 IL16Q14005 1332 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms