RNA–Protein interactions for RNA: ENST00000590953.5

RANBP3-219, Transcript of RAN binding protein 3, humanhuman

TSL 3

Gene RANBP3, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-219ENST00000590953 MRC1P22897 1456 aa13.04□□□□□ -0.32
RANBP3-219ENST00000590953 DLG5Q8TDM6 1919 aa13.03□□□□□ -0.32
RANBP3-219ENST00000590953 EN1Q05925 392 aaPredicted RBP13.03□□□□□ -0.32
RANBP3-219ENST00000590953 DCTN1Q14203 1278 aa13.03□□□□□ -0.32
RANBP3-219ENST00000590953 NCBP3Q53F19 620 aaKnown RBP13.03□□□□□ -0.32
RANBP3-219ENST00000590953 VIRMAQ69YN4 1812 aaKnown RBP13.02□□□□□ -0.32
RANBP3-219ENST00000590953 CAMKK2Q96RR4 588 aa13.02□□□□□ -0.33
RANBP3-219ENST00000590953 RGPD3A6NKT7 1758 aaPredicted RBP13.02□□□□□ -0.33
RANBP3-219ENST00000590953 RGPD4Q7Z3J3 1758 aa13.02□□□□□ -0.33
RANBP3-219ENST00000590953 HMGB2P26583 209 aaKnown RBP13.01□□□□□ -0.33
RANBP3-219ENST00000590953 EZH2Q15910 746 aaKnown RBP13.01□□□□□ -0.33
RANBP3-219ENST00000590953 NGEFQ8N5V2 710 aa13.01□□□□□ -0.33
RANBP3-219ENST00000590953 ATG3Q9NT62 314 aa13.01□□□□□ -0.33
RANBP3-219ENST00000590953 ASAP1Q9ULH1 1129 aa13.01□□□□□ -0.33
RANBP3-219ENST00000590953 TRIM35Q9UPQ4 493 aa13.01□□□□□ -0.33
RANBP3-219ENST00000590953 PALLDQ8WX93 1383 aa13.01□□□□□ -0.33
RANBP3-219ENST00000590953 CALD1Q05682 793 aaKnown RBP13□□□□□ -0.33
RANBP3-219ENST00000590953 TAF7Q15545 349 aaPredicted RBP13□□□□□ -0.33
RANBP3-219ENST00000590953 CCDC27Q2M243 656 aa13□□□□□ -0.33
RANBP3-219ENST00000590953 SLC27A3Q5K4L6 730 aa13□□□□□ -0.33
RANBP3-219ENST00000590953 BTBD11A6QL63 1104 aa12.99□□□□□ -0.33
RANBP3-219ENST00000590953 TXNRD1Q16881 649 aa12.99□□□□□ -0.33
RANBP3-219ENST00000590953 TTC5Q8N0Z6 440 aa12.99□□□□□ -0.33
RANBP3-219ENST00000590953 THUMPD2Q9BTF0 503 aaKnown RBP12.99□□□□□ -0.33
RANBP3-219ENST00000590953 LOC102724428A0A0B4J2F2 783 aa12.98□□□□□ -0.33
RANBP3-219ENST00000590953 SIK1P57059 783 aa12.98□□□□□ -0.33
RANBP3-219ENST00000590953 ZNF790Q6PG37 636 aa12.98□□□□□ -0.33
RANBP3-219ENST00000590953 PROM2Q8N271 834 aa12.98□□□□□ -0.33
RANBP3-219ENST00000590953 BABAM1Q9NWV8 329 aa12.98□□□□□ -0.33
RANBP3-219ENST00000590953 CCNL1Q9UK58 526 aaPredicted RBP12.98□□□□□ -0.33
RANBP3-219ENST00000590953 SIPA1L3O60292 1781 aaPredicted RBP12.98□□□□□ -0.33
RANBP3-219ENST00000590953 LY75O60449 1722 aa12.97□□□□□ -0.33
RANBP3-219ENST00000590953 SLC39A6Q13433 755 aa12.97□□□□□ -0.33
RANBP3-219ENST00000590953 RBM42Q9BTD8 480 aaKnown RBP12.97□□□□□ -0.33
RANBP3-219ENST00000590953 PTCD1O75127 700 aaKnown RBP12.96□□□□□ -0.33
RANBP3-219ENST00000590953 RREB1Q92766 1687 aa12.96□□□□□ -0.34
RANBP3-219ENST00000590953 PAPPAQ13219 1627 aa12.95□□□□□ -0.34
RANBP3-219ENST00000590953 ATP6V1AP38606 617 aa12.95□□□□□ -0.34
RANBP3-219ENST00000590953 NBPF14Q5TI25 921 aa12.95□□□□□ -0.34
RANBP3-219ENST00000590953 WWC1Q8IX03 1113 aa12.95□□□□□ -0.34
RANBP3-219ENST00000590953 VSIG10Q8N0Z9 540 aa12.95□□□□□ -0.34
RANBP3-219ENST00000590953 FMNL2Q96PY5 1086 aa12.95□□□□□ -0.34
RANBP3-219ENST00000590953 TSPYL4Q9UJ04 414 aa12.95□□□□□ -0.34
RANBP3-219ENST00000590953 SALL2Q9Y467 1007 aaPredicted RBP12.95□□□□□ -0.34
RANBP3-219ENST00000590953 SENP3-EIF4A1A0A087X0R7 540 aa12.94□□□□□ -0.34
RANBP3-219ENST00000590953 CFAP44Q96MT7 982 aa12.94□□□□□ -0.34
RANBP3-219ENST00000590953 LRRC4BQ9NT99 713 aa12.94□□□□□ -0.34
RANBP3-219ENST00000590953 IFT57Q9NWB7 429 aa12.94□□□□□ -0.34
RANBP3-219ENST00000590953 LAS1LQ9Y4W2 734 aaKnown RBP12.94□□□□□ -0.34
RANBP3-219ENST00000590953 KCPQ6ZWJ8 1503 aa12.93□□□□□ -0.34
RANBP3-219ENST00000590953 IL16Q14005 1332 aa12.93□□□□□ -0.34
RANBP3-219ENST00000590953 ZNF831Q5JPB2 1677 aa12.93□□□□□ -0.34
RANBP3-219ENST00000590953 CHL1O00533 1208 aa12.93□□□□□ -0.34
RANBP3-219ENST00000590953 KCNQ3O43525 872 aa12.93□□□□□ -0.34
RANBP3-219ENST00000590953 GNAI1P63096 354 aa12.93□□□□□ -0.34
RANBP3-219ENST00000590953 WDR63Q8IWG1 891 aa12.93□□□□□ -0.34
RANBP3-219ENST00000590953 ZNF496Q96IT1 587 aaPredicted RBP12.93□□□□□ -0.34
RANBP3-219ENST00000590953 TEX13AQ9BXU3 409 aaPredicted RBP12.93□□□□□ -0.34
RANBP3-219ENST00000590953 MIS18AQ9NYP9 233 aa12.93□□□□□ -0.34
RANBP3-219ENST00000590953 NUP188Q5SRE5 1749 aa12.93□□□□□ -0.34
RANBP3-219ENST00000590953 UBR2Q8IWV8 1755 aa12.92□□□□□ -0.34
RANBP3-219ENST00000590953 ZNF853P0CG23 659 aa12.92□□□□□ -0.34
RANBP3-219ENST00000590953 KCNQ4P56696 695 aa12.92□□□□□ -0.34
RANBP3-219ENST00000590953 SLC4A9Q96Q91 983 aa12.92□□□□□ -0.34
RANBP3-219ENST00000590953 STK32BQ9NY57 414 aa12.92□□□□□ -0.34
RANBP3-219ENST00000590953 HEG1Q9ULI3 1381 aa12.92□□□□□ -0.34
RANBP3-219ENST00000590953 KDM3BQ7LBC6 1761 aa12.92□□□□□ -0.34
RANBP3-219ENST00000590953 SNRPA1P09661 255 aaKnown RBP12.91□□□□□ -0.34
RANBP3-219ENST00000590953 ITPK1Q13572 414 aa12.91□□□□□ -0.34
RANBP3-219ENST00000590953 STARD3NLO95772 234 aa12.9□□□□□ -0.34
RANBP3-219ENST00000590953 EIF4A1P60842 406 aaKnown RBP12.9□□□□□ -0.34
RANBP3-219ENST00000590953 DNAJC10Q8IXB1 793 aa12.9□□□□□ -0.34
RANBP3-219ENST00000590953 LINC00116Q8NCU8 138 aa12.9□□□□□ -0.34
RANBP3-219ENST00000590953 C5P01031 1676 aa12.89□□□□□ -0.35
RANBP3-219ENST00000590953 CICQ96RK0 1608 aaPredicted RBP12.89□□□□□ -0.35
RANBP3-219ENST00000590953 SLC15A2Q16348 729 aa12.89□□□□□ -0.35
RANBP3-219ENST00000590953 RC3H1Q5TC82 1133 aaKnown RBP12.89□□□□□ -0.35
RANBP3-219ENST00000590953 AKT1S1Q96B36 256 aa12.89□□□□□ -0.35
RANBP3-219ENST00000590953 AK7Q96M32 723 aa12.89□□□□□ -0.35
RANBP3-219ENST00000590953 ANO8Q9HCE9 1232 aaPredicted RBP12.89□□□□□ -0.35
RANBP3-219ENST00000590953 MBIPQ9NS73 344 aa12.89□□□□□ -0.35
RANBP3-219ENST00000590953 TAF1LQ8IZX4 1826 aa12.89□□□□□ -0.35
RANBP3-219ENST00000590953 ZNF521Q96K83 1311 aa12.88□□□□□ -0.35
RANBP3-219ENST00000590953 CNTNAP4Q9C0A0 1308 aa12.88□□□□□ -0.35
RANBP3-219ENST00000590953 HNRNPUQ00839 825 aaKnown RBP eCLIP12.88□□□□□ -0.35
RANBP3-219ENST00000590953 MYH16Q9H6N6 1097 aa12.88□□□□□ -0.35
RANBP3-219ENST00000590953 TFCP2L1Q9NZI6 479 aa12.88□□□□□ -0.35
RANBP3-219ENST00000590953 C4BP0C0L5 1744 aa12.88□□□□□ -0.35
RANBP3-219ENST00000590953 TJP1Q07157 1748 aa12.88□□□□□ -0.35
RANBP3-219ENST00000590953 GIGYF1O75420 1035 aaPredicted RBP12.87□□□□□ -0.35
RANBP3-219ENST00000590953 CYP19A1P11511 503 aaPredicted RBP12.87□□□□□ -0.35
RANBP3-219ENST00000590953 GOLGA2Q08379 1002 aa12.87□□□□□ -0.35
RANBP3-219ENST00000590953 ZNF827Q17R98 1081 aa12.87□□□□□ -0.35
RANBP3-219ENST00000590953 FLAD1Q8NFF5 587 aa12.87□□□□□ -0.35
RANBP3-219ENST00000590953 COL5A3P25940 1745 aaPredicted RBP12.86□□□□□ -0.35
RANBP3-219ENST00000590953 E9PSI1 815 aa12.86□□□□□ -0.35
RANBP3-219ENST00000590953 HOXB7P09629 217 aa12.86□□□□□ -0.35
RANBP3-219ENST00000590953 CRKLP46109 303 aaKnown RBP12.86□□□□□ -0.35
RANBP3-219ENST00000590953 R3HDM1Q15032 1099 aaKnown RBP12.86□□□□□ -0.35
RANBP3-219ENST00000590953 CCDC87Q9NVE4 849 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms