RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 RALBP1Q15311 655 aa29.94■■■□□ 2.38
MBD3-208ENST00000590830 LINC00116Q8NCU8 138 aa29.92■■■□□ 2.38
MBD3-208ENST00000590830 MTFR1LQ9H019 292 aa29.92■■■□□ 2.38
MBD3-208ENST00000590830 FCHSD2O94868 740 aa29.9■■■□□ 2.38
MBD3-208ENST00000590830 ATP6V1AP38606 617 aa29.9■■■□□ 2.38
MBD3-208ENST00000590830 AMIGO3Q86WK7 504 aa29.9■■■□□ 2.38
MBD3-208ENST00000590830 SGIP1Q9BQI5 828 aa29.9■■■□□ 2.38
MBD3-208ENST00000590830 SLC52A2Q9HAB3 445 aa29.9■■■□□ 2.38
MBD3-208ENST00000590830 COL23A1Q86Y22 540 aaPredicted RBP29.89■■■□□ 2.38
MBD3-208ENST00000590830 GAS2L2Q8NHY3 880 aa29.89■■■□□ 2.38
MBD3-208ENST00000590830 RBM42Q9BTD8 480 aaKnown RBP29.89■■■□□ 2.38
MBD3-208ENST00000590830 C5P01031 1676 aa29.88■■■□□ 2.37
MBD3-208ENST00000590830 SMIM5Q71RC9 77 aa29.88■■■□□ 2.37
MBD3-208ENST00000590830 IL17REQ8NFR9 667 aa29.88■■■□□ 2.37
MBD3-208ENST00000590830 SCN11AQ9UI33 1791 aa29.87■■■□□ 2.37
MBD3-208ENST00000590830 TAF1LQ8IZX4 1826 aa29.87■■■□□ 2.37
MBD3-208ENST00000590830 TUBGCP6Q96RT7 1819 aa29.87■■■□□ 2.37
MBD3-208ENST00000590830 GNAT3A8MTJ3 354 aa29.85■■■□□ 2.37
MBD3-208ENST00000590830 PTCD1O75127 700 aaKnown RBP29.85■■■□□ 2.37
MBD3-208ENST00000590830 HMGB2P26583 209 aaKnown RBP29.85■■■□□ 2.37
MBD3-208ENST00000590830 SLC16A10Q8TF71 515 aa29.85■■■□□ 2.37
MBD3-208ENST00000590830 MAP3K5Q99683 1374 aa29.85■■■□□ 2.37
MBD3-208ENST00000590830 QSER1Q2KHR3 1735 aa29.85■■■□□ 2.37
MBD3-208ENST00000590830 ADAMTS7Q9UKP4 1686 aa29.84■■■□□ 2.37
MBD3-208ENST00000590830 C4BP0C0L5 1744 aa29.84■■■□□ 2.37
MBD3-208ENST00000590830 MRC1P22897 1456 aa29.83■■■□□ 2.37
MBD3-208ENST00000590830 AK7Q96M32 723 aa29.83■■■□□ 2.37
MBD3-208ENST00000590830 PPP1R1BQ9UD71 204 aaPredicted RBP29.83■■■□□ 2.37
MBD3-208ENST00000590830 SLC39A6Q13433 755 aa29.82■■■□□ 2.36
MBD3-208ENST00000590830 MYBBP1AQ9BQG0 1328 aaKnown RBP29.81■■■□□ 2.36
MBD3-208ENST00000590830 MSH5O43196 834 aa29.8■■■□□ 2.36
MBD3-208ENST00000590830 PLEKHF1Q96S99 279 aa29.79■■■□□ 2.36
MBD3-208ENST00000590830 PRKRIP1Q9H875 184 aaPredicted RBP29.79■■■□□ 2.36
MBD3-208ENST00000590830 ZNF316A6NFI3 1004 aaPredicted RBP29.78■■■□□ 2.36
MBD3-208ENST00000590830 FLAD1Q8NFF5 587 aa29.78■■■□□ 2.36
MBD3-208ENST00000590830 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.77■■■□□ 2.36
MBD3-208ENST00000590830 PHF14O94880 888 aa29.77■■■□□ 2.36
MBD3-208ENST00000590830 GNPATO15228 680 aa29.76■■■□□ 2.35
MBD3-208ENST00000590830 CEMIPQ8WUJ3 1361 aa29.76■■■□□ 2.35
MBD3-208ENST00000590830 RC3H1Q5TC82 1133 aaKnown RBP29.75■■■□□ 2.35
MBD3-208ENST00000590830 ARXQ96QS3 562 aa29.75■■■□□ 2.35
MBD3-208ENST00000590830 ZNF831Q5JPB2 1677 aa29.75■■■□□ 2.35
MBD3-208ENST00000590830 SSFA2P28290 1259 aa29.74■■■□□ 2.35
MBD3-208ENST00000590830 TEFQ10587 303 aa29.73■■■□□ 2.35
MBD3-208ENST00000590830 MSL1Q68DK7 614 aa29.73■■■□□ 2.35
MBD3-208ENST00000590830 VIRMAQ69YN4 1812 aaKnown RBP29.73■■■□□ 2.35
MBD3-208ENST00000590830 CNTNAP4Q9C0A0 1308 aa29.72■■■□□ 2.35
MBD3-208ENST00000590830 UBR3Q6ZT12 1888 aa29.72■■■□□ 2.35
MBD3-208ENST00000590830 MCM10Q7L590 875 aa29.72■■■□□ 2.35
MBD3-208ENST00000590830 DCTN1Q14203 1278 aa29.71■■■□□ 2.35
MBD3-208ENST00000590830 DNAJC10Q8IXB1 793 aa29.71■■■□□ 2.35
MBD3-208ENST00000590830 KCPQ6ZWJ8 1503 aa29.71■■■□□ 2.35
MBD3-208ENST00000590830 FHDC1Q9C0D6 1143 aaPredicted RBP29.7■■■□□ 2.35
MBD3-208ENST00000590830 COL24A1Q17RW2 1714 aa29.7■■■□□ 2.34
MBD3-208ENST00000590830 RPS6KA4O75676 772 aa29.69■■■□□ 2.34
MBD3-208ENST00000590830 CRKLP46109 303 aaKnown RBP29.69■■■□□ 2.34
MBD3-208ENST00000590830 HTATSF1O43719 755 aaKnown RBP29.68■■■□□ 2.34
MBD3-208ENST00000590830 POLD1P28340 1107 aa29.68■■■□□ 2.34
MBD3-208ENST00000590830 INTS5Q6P9B9 1019 aaKnown RBP29.68■■■□□ 2.34
MBD3-208ENST00000590830 RTF1Q92541 710 aaKnown RBP29.68■■■□□ 2.34
MBD3-208ENST00000590830 SYT17Q9BSW7 474 aa29.68■■■□□ 2.34
MBD3-208ENST00000590830 RTCBQ9Y3I0 505 aaKnown RBP29.68■■■□□ 2.34
MBD3-208ENST00000590830 COL5A3P25940 1745 aaPredicted RBP29.68■■■□□ 2.34
MBD3-208ENST00000590830 KCNQ3O43525 872 aa29.67■■■□□ 2.34
MBD3-208ENST00000590830 ZNF790Q6PG37 636 aa29.67■■■□□ 2.34
MBD3-208ENST00000590830 TJP1Q07157 1748 aa29.67■■■□□ 2.34
MBD3-208ENST00000590830 TRAPPC3LQ5T215 181 aa29.66■■■□□ 2.34
MBD3-208ENST00000590830 ARHGEF1Q92888 912 aaKnown RBP29.66■■■□□ 2.34
MBD3-208ENST00000590830 ZNF496Q96IT1 587 aaPredicted RBP29.66■■■□□ 2.34
MBD3-208ENST00000590830 MYH14Q7Z406 1995 aaKnown RBP29.65■■■□□ 2.34
MBD3-208ENST00000590830 CYP19A1P11511 503 aaPredicted RBP29.65■■■□□ 2.34
MBD3-208ENST00000590830 NFE2L2Q16236 605 aa29.65■■■□□ 2.34
MBD3-208ENST00000590830 VSIG10Q8N0Z9 540 aa29.65■■■□□ 2.34
MBD3-208ENST00000590830 PNNQ9H307 717 aaKnown RBP29.65■■■□□ 2.34
MBD3-208ENST00000590830 SIPA1L3O60292 1781 aaPredicted RBP29.64■■■□□ 2.34
MBD3-208ENST00000590830 BTBD11A6QL63 1104 aa29.64■■■□□ 2.34
MBD3-208ENST00000590830 TTC5Q8N0Z6 440 aa29.64■■■□□ 2.34
MBD3-208ENST00000590830 NEFMP07197 916 aa29.63■■■□□ 2.33
MBD3-208ENST00000590830 CICQ96RK0 1608 aaPredicted RBP29.63■■■□□ 2.33
MBD3-208ENST00000590830 ADRA2BP18089 450 aa29.61■■■□□ 2.33
MBD3-208ENST00000590830 CCDC87Q9NVE4 849 aa29.61■■■□□ 2.33
MBD3-208ENST00000590830 MAPK8IP3Q9UPT6 1336 aa29.6■■■□□ 2.33
MBD3-208ENST00000590830 UBR2Q8IWV8 1755 aa29.59■■■□□ 2.33
MBD3-208ENST00000590830 ADAMTS8Q9UP79 889 aa29.59■■■□□ 2.33
MBD3-208ENST00000590830 THUMPD2Q9BTF0 503 aaKnown RBP29.58■■■□□ 2.33
MBD3-208ENST00000590830 HEG1Q9ULI3 1381 aa29.58■■■□□ 2.33
MBD3-208ENST00000590830 TAF7Q15545 349 aaPredicted RBP29.57■■■□□ 2.32
MBD3-208ENST00000590830 CCDC146Q8IYE0 955 aa29.57■■■□□ 2.32
MBD3-208ENST00000590830 FMNL2Q96PY5 1086 aa29.57■■■□□ 2.32
MBD3-208ENST00000590830 MIS18AQ9NYP9 233 aa29.57■■■□□ 2.32
MBD3-208ENST00000590830 RFC4P35249 363 aa29.56■■■□□ 2.32
MBD3-208ENST00000590830 ZBTB1Q9Y2K1 713 aa29.56■■■□□ 2.32
MBD3-208ENST00000590830 SOS1Q07889 1333 aaPredicted RBP29.55■■■□□ 2.32
MBD3-208ENST00000590830 GYS1P13807 737 aa29.55■■■□□ 2.32
MBD3-208ENST00000590830 WDR43Q15061 677 aaKnown RBP eCLIP29.55■■■□□ 2.32
MBD3-208ENST00000590830 CCDC184Q52MB2 194 aa29.55■■■□□ 2.32
MBD3-208ENST00000590830 KLHL34Q8N239 644 aa29.55■■■□□ 2.32
MBD3-208ENST00000590830 SRP68Q9UHB9 627 aaKnown RBP29.55■■■□□ 2.32
MBD3-208ENST00000590830 TMPOP42166 694 aaKnown RBP29.54■■■□□ 2.32
MBD3-208ENST00000590830 RIPK4P57078 832 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms