RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 CEMIPQ8WUJ3 1361 aa25.18■■□□□ 1.62
DDX39A-214ENST00000590556 EN1Q05925 392 aaPredicted RBP25.18■■□□□ 1.62
DDX39A-214ENST00000590556 MRC1P22897 1456 aa25.17■■□□□ 1.62
DDX39A-214ENST00000590556 PLSCR1O15162 318 aa25.17■■□□□ 1.62
DDX39A-214ENST00000590556 SMARCC1Q92922 1105 aaPredicted RBP25.16■■□□□ 1.62
DDX39A-214ENST00000590556 SENP3-EIF4A1A0A087X0R7 540 aa25.15■■□□□ 1.62
DDX39A-214ENST00000590556 ASAP1Q9ULH1 1129 aa25.15■■□□□ 1.62
DDX39A-214ENST00000590556 TRIM35Q9UPQ4 493 aa25.15■■□□□ 1.62
DDX39A-214ENST00000590556 CAMKK2Q96RR4 588 aa25.14■■□□□ 1.62
DDX39A-214ENST00000590556 THUMPD2Q9BTF0 503 aaKnown RBP25.14■■□□□ 1.62
DDX39A-214ENST00000590556 EZH2Q15910 746 aaKnown RBP25.13■■□□□ 1.61
DDX39A-214ENST00000590556 ATG3Q9NT62 314 aa25.13■■□□□ 1.61
DDX39A-214ENST00000590556 RGPD3A6NKT7 1758 aaPredicted RBP25.11■■□□□ 1.61
DDX39A-214ENST00000590556 SIPA1L3O60292 1781 aaPredicted RBP25.11■■□□□ 1.61
DDX39A-214ENST00000590556 RGPD4Q7Z3J3 1758 aa25.11■■□□□ 1.61
DDX39A-214ENST00000590556 PALLDQ8WX93 1383 aa25.11■■□□□ 1.61
DDX39A-214ENST00000590556 TAF7Q15545 349 aaPredicted RBP25.11■■□□□ 1.61
DDX39A-214ENST00000590556 BTBD11A6QL63 1104 aa25.09■■□□□ 1.61
DDX39A-214ENST00000590556 SLC39A6Q13433 755 aa25.09■■□□□ 1.61
DDX39A-214ENST00000590556 TXNRD1Q16881 649 aa25.09■■□□□ 1.61
DDX39A-214ENST00000590556 NCBP3Q53F19 620 aaKnown RBP25.08■■□□□ 1.61
DDX39A-214ENST00000590556 PROM2Q8N271 834 aa25.08■■□□□ 1.61
DDX39A-214ENST00000590556 SALL2Q9Y467 1007 aaPredicted RBP25.08■■□□□ 1.61
DDX39A-214ENST00000590556 LY75O60449 1722 aa25.07■■□□□ 1.6
DDX39A-214ENST00000590556 CCDC27Q2M243 656 aa25.07■■□□□ 1.6
DDX39A-214ENST00000590556 SLC27A3Q5K4L6 730 aa25.06■■□□□ 1.6
DDX39A-214ENST00000590556 TTC5Q8N0Z6 440 aa25.06■■□□□ 1.6
DDX39A-214ENST00000590556 NGEFQ8N5V2 710 aa25.06■■□□□ 1.6
DDX39A-214ENST00000590556 RBM42Q9BTD8 480 aaKnown RBP25.06■■□□□ 1.6
DDX39A-214ENST00000590556 CCNL1Q9UK58 526 aaPredicted RBP25.06■■□□□ 1.6
DDX39A-214ENST00000590556 PAPPAQ13219 1627 aa25.05■■□□□ 1.6
DDX39A-214ENST00000590556 PTCD1O75127 700 aaKnown RBP25.05■■□□□ 1.6
DDX39A-214ENST00000590556 CALD1Q05682 793 aaKnown RBP25.05■■□□□ 1.6
DDX39A-214ENST00000590556 ZNF790Q6PG37 636 aa25.05■■□□□ 1.6
DDX39A-214ENST00000590556 MIS18AQ9NYP9 233 aa25.05■■□□□ 1.6
DDX39A-214ENST00000590556 LOC102724428A0A0B4J2F2 783 aa25.04■■□□□ 1.6
DDX39A-214ENST00000590556 SIK1P57059 783 aa25.04■■□□□ 1.6
DDX39A-214ENST00000590556 WWC1Q8IX03 1113 aa25.04■■□□□ 1.6
DDX39A-214ENST00000590556 KCNQ4P56696 695 aa25.03■■□□□ 1.6
DDX39A-214ENST00000590556 RREB1Q92766 1687 aa25.03■■□□□ 1.6
DDX39A-214ENST00000590556 LRRC4BQ9NT99 713 aa25.02■■□□□ 1.6
DDX39A-214ENST00000590556 KCNQ3O43525 872 aa25.01■■□□□ 1.59
DDX39A-214ENST00000590556 ATP6V1AP38606 617 aa25.01■■□□□ 1.59
DDX39A-214ENST00000590556 BABAM1Q9NWV8 329 aa25.01■■□□□ 1.59
DDX39A-214ENST00000590556 LAS1LQ9Y4W2 734 aaKnown RBP25.01■■□□□ 1.59
DDX39A-214ENST00000590556 TSPYL4Q9UJ04 414 aa25■■□□□ 1.59
DDX39A-214ENST00000590556 NUP188Q5SRE5 1749 aa24.99■■□□□ 1.59
DDX39A-214ENST00000590556 KCPQ6ZWJ8 1503 aa24.99■■□□□ 1.59
DDX39A-214ENST00000590556 UBR2Q8IWV8 1755 aa24.99■■□□□ 1.59
DDX39A-214ENST00000590556 ZNF496Q96IT1 587 aaPredicted RBP24.99■■□□□ 1.59
DDX39A-214ENST00000590556 SLC4A9Q96Q91 983 aa24.99■■□□□ 1.59
DDX39A-214ENST00000590556 CHL1O00533 1208 aa24.98■■□□□ 1.59
DDX39A-214ENST00000590556 FMNL2Q96PY5 1086 aa24.98■■□□□ 1.59
DDX39A-214ENST00000590556 KDM3BQ7LBC6 1761 aa24.98■■□□□ 1.59
DDX39A-214ENST00000590556 HMGB2P26583 209 aaKnown RBP24.97■■□□□ 1.59
DDX39A-214ENST00000590556 ITPK1Q13572 414 aa24.97■■□□□ 1.59
DDX39A-214ENST00000590556 CFAP44Q96MT7 982 aa24.97■■□□□ 1.59
DDX39A-214ENST00000590556 IFT57Q9NWB7 429 aa24.97■■□□□ 1.59
DDX39A-214ENST00000590556 GNAI1P63096 354 aa24.96■■□□□ 1.59
DDX39A-214ENST00000590556 WDR63Q8IWG1 891 aa24.96■■□□□ 1.59
DDX39A-214ENST00000590556 ZNF831Q5JPB2 1677 aa24.96■■□□□ 1.59
DDX39A-214ENST00000590556 ZNF853P0CG23 659 aa24.95■■□□□ 1.58
DDX39A-214ENST00000590556 NBPF14Q5TI25 921 aa24.95■■□□□ 1.58
DDX39A-214ENST00000590556 VSIG10Q8N0Z9 540 aa24.95■■□□□ 1.58
DDX39A-214ENST00000590556 HEG1Q9ULI3 1381 aa24.94■■□□□ 1.58
DDX39A-214ENST00000590556 IL16Q14005 1332 aa24.94■■□□□ 1.58
DDX39A-214ENST00000590556 TAF1LQ8IZX4 1826 aa24.94■■□□□ 1.58
DDX39A-214ENST00000590556 C5P01031 1676 aa24.94■■□□□ 1.58
DDX39A-214ENST00000590556 LINC00116Q8NCU8 138 aa24.93■■□□□ 1.58
DDX39A-214ENST00000590556 EIF4A1P60842 406 aaKnown RBP24.92■■□□□ 1.58
DDX39A-214ENST00000590556 DNAJC10Q8IXB1 793 aa24.92■■□□□ 1.58
DDX39A-214ENST00000590556 MBIPQ9NS73 344 aa24.92■■□□□ 1.58
DDX39A-214ENST00000590556 STK32BQ9NY57 414 aa24.92■■□□□ 1.58
DDX39A-214ENST00000590556 HNRNPUQ00839 825 aaKnown RBP eCLIP24.91■■□□□ 1.58
DDX39A-214ENST00000590556 TEX13AQ9BXU3 409 aaPredicted RBP24.91■■□□□ 1.58
DDX39A-214ENST00000590556 ANO8Q9HCE9 1232 aaPredicted RBP24.91■■□□□ 1.58
DDX39A-214ENST00000590556 TJP1Q07157 1748 aa24.91■■□□□ 1.58
DDX39A-214ENST00000590556 ZNF521Q96K83 1311 aa24.9■■□□□ 1.58
DDX39A-214ENST00000590556 SNRPA1P09661 255 aaKnown RBP24.9■■□□□ 1.58
DDX39A-214ENST00000590556 CICQ96RK0 1608 aaPredicted RBP24.9■■□□□ 1.58
DDX39A-214ENST00000590556 AKT1S1Q96B36 256 aa24.89■■□□□ 1.58
DDX39A-214ENST00000590556 C4BP0C0L5 1744 aa24.89■■□□□ 1.57
DDX39A-214ENST00000590556 SLC15A2Q16348 729 aa24.88■■□□□ 1.57
DDX39A-214ENST00000590556 ZNF827Q17R98 1081 aa24.88■■□□□ 1.57
DDX39A-214ENST00000590556 COL5A3P25940 1745 aaPredicted RBP24.88■■□□□ 1.57
DDX39A-214ENST00000590556 STARD3NLO95772 234 aa24.87■■□□□ 1.57
DDX39A-214ENST00000590556 CYP19A1P11511 503 aaPredicted RBP24.87■■□□□ 1.57
DDX39A-214ENST00000590556 AK7Q96M32 723 aa24.87■■□□□ 1.57
DDX39A-214ENST00000590556 PRAMEF22A3QJZ6 481 aa24.86■■□□□ 1.57
DDX39A-214ENST00000590556 GIGYF1O75420 1035 aaPredicted RBP24.86■■□□□ 1.57
DDX39A-214ENST00000590556 GOLGA2Q08379 1002 aa24.86■■□□□ 1.57
DDX39A-214ENST00000590556 RC3H1Q5TC82 1133 aaKnown RBP24.86■■□□□ 1.57
DDX39A-214ENST00000590556 TSR2Q969E8 191 aaKnown RBP24.86■■□□□ 1.57
DDX39A-214ENST00000590556 CNTNAP4Q9C0A0 1308 aa24.86■■□□□ 1.57
DDX39A-214ENST00000590556 CRKLP46109 303 aaKnown RBP24.85■■□□□ 1.57
DDX39A-214ENST00000590556 MYH16Q9H6N6 1097 aa24.85■■□□□ 1.57
DDX39A-214ENST00000590556 TFCP2L1Q9NZI6 479 aa24.85■■□□□ 1.57
DDX39A-214ENST00000590556 USP16Q9Y5T5 823 aa24.85■■□□□ 1.57
DDX39A-214ENST00000590556 R3HDM1Q15032 1099 aaKnown RBP24.84■■□□□ 1.57
DDX39A-214ENST00000590556 SPINK5Q9NQ38 1064 aaPredicted RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms