RNA–Protein interactions for RNA: ENST00000590418.1

PPM1D-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1D, humanhuman

TSL 4

Gene PPM1D, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1D-203ENST00000590418 YTHDC1Q96MU7 727 aaKnown RBP17.81■□□□□ 0.44
PPM1D-203ENST00000590418 TAF7Q15545 349 aaPredicted RBP17.8■□□□□ 0.44
PPM1D-203ENST00000590418 NFATC2IPQ8NCF5 419 aa17.8■□□□□ 0.44
PPM1D-203ENST00000590418 KDM3BQ7LBC6 1761 aa17.8■□□□□ 0.44
PPM1D-203ENST00000590418 BTAF1O14981 1849 aa17.79■□□□□ 0.44
PPM1D-203ENST00000590418 IFT57Q9NWB7 429 aa17.79■□□□□ 0.44
PPM1D-203ENST00000590418 BABAM1Q9NWV8 329 aa17.79■□□□□ 0.44
PPM1D-203ENST00000590418 GNAI1P63096 354 aa17.78■□□□□ 0.44
PPM1D-203ENST00000590418 GOLGA2Q08379 1002 aa17.78■□□□□ 0.44
PPM1D-203ENST00000590418 CFAP44Q96MT7 982 aa17.78■□□□□ 0.44
PPM1D-203ENST00000590418 BCL11BQ9C0K0 894 aaPredicted RBP17.78■□□□□ 0.44
PPM1D-203ENST00000590418 KAT6BQ8WYB5 2073 aa17.77■□□□□ 0.44
PPM1D-203ENST00000590418 BTBD11A6QL63 1104 aa17.77■□□□□ 0.44
PPM1D-203ENST00000590418 KCNQ2O43526 872 aa17.77■□□□□ 0.44
PPM1D-203ENST00000590418 PIGBQ92521 554 aa17.77■□□□□ 0.44
PPM1D-203ENST00000590418 TNS1Q9HBL0 1735 aaKnown RBP17.77■□□□□ 0.44
PPM1D-203ENST00000590418 UBR2Q8IWV8 1755 aa17.76■□□□□ 0.43
PPM1D-203ENST00000590418 LAS1LQ9Y4W2 734 aaKnown RBP17.76■□□□□ 0.43
PPM1D-203ENST00000590418 E9PSI1 815 aa17.75■□□□□ 0.43
PPM1D-203ENST00000590418 CHL1O00533 1208 aa17.75■□□□□ 0.43
PPM1D-203ENST00000590418 TRIM37O94972 964 aa17.75■□□□□ 0.43
PPM1D-203ENST00000590418 ZNF853P0CG23 659 aa17.75■□□□□ 0.43
PPM1D-203ENST00000590418 MYH16Q9H6N6 1097 aa17.75■□□□□ 0.43
PPM1D-203ENST00000590418 TSPYL4Q9UJ04 414 aa17.75■□□□□ 0.43
PPM1D-203ENST00000590418 TTC5Q8N0Z6 440 aa17.74■□□□□ 0.43
PPM1D-203ENST00000590418 EP400Q96L91 3159 aa17.74■□□□□ 0.43
PPM1D-203ENST00000590418 ZNF790Q6PG37 636 aa17.73■□□□□ 0.43
PPM1D-203ENST00000590418 SMARCC1Q92922 1105 aaPredicted RBP17.73■□□□□ 0.43
PPM1D-203ENST00000590418 RGPD3A6NKT7 1758 aaPredicted RBP17.73■□□□□ 0.43
PPM1D-203ENST00000590418 RGPD4Q7Z3J3 1758 aa17.73■□□□□ 0.43
PPM1D-203ENST00000590418 KCPQ6ZWJ8 1503 aa17.72■□□□□ 0.43
PPM1D-203ENST00000590418 SLFN5Q08AF3 891 aa17.72■□□□□ 0.43
PPM1D-203ENST00000590418 MBIPQ9NS73 344 aa17.72■□□□□ 0.43
PPM1D-203ENST00000590418 ATG3Q9NT62 314 aa17.72■□□□□ 0.43
PPM1D-203ENST00000590418 MIS18AQ9NYP9 233 aa17.72■□□□□ 0.43
PPM1D-203ENST00000590418 FANCIQ9NVI1 1328 aa17.72■□□□□ 0.43
PPM1D-203ENST00000590418 PALLDQ8WX93 1383 aa17.71■□□□□ 0.43
PPM1D-203ENST00000590418 SLC39A6Q13433 755 aa17.71■□□□□ 0.43
PPM1D-203ENST00000590418 PTF1AQ7RTS3 328 aa17.71■□□□□ 0.43
PPM1D-203ENST00000590418 SPINK5Q9NQ38 1064 aaPredicted RBP17.71■□□□□ 0.43
PPM1D-203ENST00000590418 ASAP1Q9ULH1 1129 aa17.71■□□□□ 0.43
PPM1D-203ENST00000590418 LY75O60449 1722 aa17.71■□□□□ 0.43
PPM1D-203ENST00000590418 ZNF831Q5JPB2 1677 aa17.71■□□□□ 0.42
PPM1D-203ENST00000590418 CICQ96RK0 1608 aaPredicted RBP17.7■□□□□ 0.42
PPM1D-203ENST00000590418 CDCA7LQ96GN5 454 aa17.7■□□□□ 0.42
PPM1D-203ENST00000590418 TSR2Q969E8 191 aaKnown RBP17.69■□□□□ 0.42
PPM1D-203ENST00000590418 FMNL2Q96PY5 1086 aa17.69■□□□□ 0.42
PPM1D-203ENST00000590418 EIF4A1P60842 406 aaKnown RBP17.68■□□□□ 0.42
PPM1D-203ENST00000590418 SF3B2Q13435 895 aaKnown RBP17.68■□□□□ 0.42
PPM1D-203ENST00000590418 CCDC125Q86Z20 511 aa17.68■□□□□ 0.42
PPM1D-203ENST00000590418 TRMT2AQ8IZ69 625 aaKnown RBP17.68■□□□□ 0.42
PPM1D-203ENST00000590418 LAMB4A4D0S4 1761 aa17.68■□□□□ 0.42
PPM1D-203ENST00000590418 KCNQ3O43525 872 aa17.67■□□□□ 0.42
PPM1D-203ENST00000590418 APBA3O96018 575 aa17.67■□□□□ 0.42
PPM1D-203ENST00000590418 HEG1Q9ULI3 1381 aa17.66■□□□□ 0.42
PPM1D-203ENST00000590418 PLSCR1O15162 318 aa17.66■□□□□ 0.42
PPM1D-203ENST00000590418 PTCD1O75127 700 aaKnown RBP17.66■□□□□ 0.42
PPM1D-203ENST00000590418 DUSP27Q5VZP5 1158 aa17.66■□□□□ 0.42
PPM1D-203ENST00000590418 VSIG10Q8N0Z9 540 aa17.66■□□□□ 0.42
PPM1D-203ENST00000590418 ZNF496Q96IT1 587 aaPredicted RBP17.66■□□□□ 0.42
PPM1D-203ENST00000590418 C5P01031 1676 aa17.66■□□□□ 0.42
PPM1D-203ENST00000590418 TJP1Q07157 1748 aa17.66■□□□□ 0.42
PPM1D-203ENST00000590418 ILDR2Q71H61 639 aa17.65■□□□□ 0.42
PPM1D-203ENST00000590418 RBM42Q9BTD8 480 aaKnown RBP17.65■□□□□ 0.42
PPM1D-203ENST00000590418 SOS1Q07889 1333 aaPredicted RBP17.65■□□□□ 0.42
PPM1D-203ENST00000590418 LOC102724428A0A0B4J2F2 783 aa17.64■□□□□ 0.41
PPM1D-203ENST00000590418 SIK1P57059 783 aa17.64■□□□□ 0.41
PPM1D-203ENST00000590418 HOXB7P09629 217 aa17.63■□□□□ 0.41
PPM1D-203ENST00000590418 SNRPA1P09661 255 aaKnown RBP17.63■□□□□ 0.41
PPM1D-203ENST00000590418 BAG6P46379 1132 aa17.63■□□□□ 0.41
PPM1D-203ENST00000590418 EXOSC9Q06265 439 aaKnown RBP17.63■□□□□ 0.41
PPM1D-203ENST00000590418 COL5A3P25940 1745 aaPredicted RBP17.63■□□□□ 0.41
PPM1D-203ENST00000590418 GIGYF1O75420 1035 aaPredicted RBP17.62■□□□□ 0.41
PPM1D-203ENST00000590418 HMGB2P26583 209 aaKnown RBP17.62■□□□□ 0.41
PPM1D-203ENST00000590418 SLC27A3Q5K4L6 730 aa17.62■□□□□ 0.41
PPM1D-203ENST00000590418 TEX13AQ9BXU3 409 aaPredicted RBP17.62■□□□□ 0.41
PPM1D-203ENST00000590418 RREB1Q92766 1687 aa17.61■□□□□ 0.41
PPM1D-203ENST00000590418 TAF1LQ8IZX4 1826 aa17.61■□□□□ 0.41
PPM1D-203ENST00000590418 CT47B1P0C2W7 299 aaPredicted RBP17.61■□□□□ 0.41
PPM1D-203ENST00000590418 ATP6V1AP38606 617 aa17.61■□□□□ 0.41
PPM1D-203ENST00000590418 KRT24Q2M2I5 525 aa17.61■□□□□ 0.41
PPM1D-203ENST00000590418 TWISTNBQ3B726 338 aaPredicted RBP17.61■□□□□ 0.41
PPM1D-203ENST00000590418 C8orf58Q8NAV2 365 aa17.61■□□□□ 0.41
PPM1D-203ENST00000590418 CHMP4AQ9BY43 222 aa17.61■□□□□ 0.41
PPM1D-203ENST00000590418 CCNL1Q9UK58 526 aaPredicted RBP17.61■□□□□ 0.41
PPM1D-203ENST00000590418 UPF1Q92900 1129 aaKnown RBP eCLIP17.6■□□□□ 0.41
PPM1D-203ENST00000590418 SLC4A9Q96Q91 983 aa17.6■□□□□ 0.41
PPM1D-203ENST00000590418 TXNRD1Q16881 649 aa17.59■□□□□ 0.41
PPM1D-203ENST00000590418 TSPYL6Q8N831 410 aa17.59■□□□□ 0.41
PPM1D-203ENST00000590418 ELL2O00472 640 aaPredicted RBP17.58■□□□□ 0.4
PPM1D-203ENST00000590418 STARD3NLO95772 234 aa17.58■□□□□ 0.4
PPM1D-203ENST00000590418 DNAJC10Q8IXB1 793 aa17.58■□□□□ 0.4
PPM1D-203ENST00000590418 ZNF428Q96B54 188 aa17.58■□□□□ 0.4
PPM1D-203ENST00000590418 CAMKK2Q96RR4 588 aa17.58■□□□□ 0.4
PPM1D-203ENST00000590418 C4BP0C0L5 1744 aa17.58■□□□□ 0.4
PPM1D-203ENST00000590418 PRAMEF22A3QJZ6 481 aa17.57■□□□□ 0.4
PPM1D-203ENST00000590418 EN1Q05925 392 aaPredicted RBP17.57■□□□□ 0.4
PPM1D-203ENST00000590418 ITPK1Q13572 414 aa17.57■□□□□ 0.4
PPM1D-203ENST00000590418 NUP188Q5SRE5 1749 aa17.56■□□□□ 0.4
PPM1D-203ENST00000590418 VAMP4O75379 141 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms