RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 CCER2I3L3R5 266 aa22.17■■□□□ 1.14
LSM14A-208ENST00000590416 TMPOP42166 694 aaKnown RBP22.17■■□□□ 1.14
LSM14A-208ENST00000590416 DCTN1Q14203 1278 aa22.17■■□□□ 1.14
LSM14A-208ENST00000590416 SMARCC1Q92922 1105 aaPredicted RBP22.17■■□□□ 1.14
LSM14A-208ENST00000590416 PALLDQ8WX93 1383 aa22.16■■□□□ 1.14
LSM14A-208ENST00000590416 IL17REQ8NFR9 667 aa22.16■■□□□ 1.14
LSM14A-208ENST00000590416 LY75O60449 1722 aa22.16■■□□□ 1.14
LSM14A-208ENST00000590416 MRC1P22897 1456 aa22.15■■□□□ 1.14
LSM14A-208ENST00000590416 HTATSF1O43719 755 aaKnown RBP22.15■■□□□ 1.14
LSM14A-208ENST00000590416 TXNRD1Q16881 649 aa22.15■■□□□ 1.14
LSM14A-208ENST00000590416 ASAP1Q9ULH1 1129 aa22.15■■□□□ 1.14
LSM14A-208ENST00000590416 NUP188Q5SRE5 1749 aa22.14■■□□□ 1.14
LSM14A-208ENST00000590416 LMOD3Q0VAK6 560 aa22.14■■□□□ 1.13
LSM14A-208ENST00000590416 APAF1O14727 1248 aa22.13■■□□□ 1.13
LSM14A-208ENST00000590416 ATG3Q9NT62 314 aa22.13■■□□□ 1.13
LSM14A-208ENST00000590416 SIPA1L3O60292 1781 aaPredicted RBP22.12■■□□□ 1.13
LSM14A-208ENST00000590416 RBM42Q9BTD8 480 aaKnown RBP22.12■■□□□ 1.13
LSM14A-208ENST00000590416 CCNL1Q9UK58 526 aaPredicted RBP22.12■■□□□ 1.13
LSM14A-208ENST00000590416 CEMIPQ8WUJ3 1361 aa22.12■■□□□ 1.13
LSM14A-208ENST00000590416 SENP3-EIF4A1A0A087X0R7 540 aa22.11■■□□□ 1.13
LSM14A-208ENST00000590416 KCNQ4P56696 695 aa22.1■■□□□ 1.13
LSM14A-208ENST00000590416 SLC39A6Q13433 755 aa22.1■■□□□ 1.13
LSM14A-208ENST00000590416 SLC27A3Q5K4L6 730 aa22.1■■□□□ 1.13
LSM14A-208ENST00000590416 TTC5Q8N0Z6 440 aa22.1■■□□□ 1.13
LSM14A-208ENST00000590416 PROM2Q8N271 834 aa22.1■■□□□ 1.13
LSM14A-208ENST00000590416 THUMPD2Q9BTF0 503 aaKnown RBP22.1■■□□□ 1.13
LSM14A-208ENST00000590416 NBPF14Q5TI25 921 aa22.09■■□□□ 1.13
LSM14A-208ENST00000590416 PAPPAQ13219 1627 aa22.09■■□□□ 1.13
LSM14A-208ENST00000590416 BTBD11A6QL63 1104 aa22.08■■□□□ 1.13
LSM14A-208ENST00000590416 PTCD1O75127 700 aaKnown RBP22.08■■□□□ 1.13
LSM14A-208ENST00000590416 LOC102724428A0A0B4J2F2 783 aa22.07■■□□□ 1.12
LSM14A-208ENST00000590416 SIK1P57059 783 aa22.07■■□□□ 1.12
LSM14A-208ENST00000590416 ATP6V1AP38606 617 aa22.06■■□□□ 1.12
LSM14A-208ENST00000590416 LRRC4BQ9NT99 713 aa22.06■■□□□ 1.12
LSM14A-208ENST00000590416 C5P01031 1676 aa22.06■■□□□ 1.12
LSM14A-208ENST00000590416 TAF1LQ8IZX4 1826 aa22.06■■□□□ 1.12
LSM14A-208ENST00000590416 TAF7Q15545 349 aaPredicted RBP22.05■■□□□ 1.12
LSM14A-208ENST00000590416 SALL2Q9Y467 1007 aaPredicted RBP22.05■■□□□ 1.12
LSM14A-208ENST00000590416 STK32BQ9NY57 414 aa22.04■■□□□ 1.12
LSM14A-208ENST00000590416 TRIM35Q9UPQ4 493 aa22.04■■□□□ 1.12
LSM14A-208ENST00000590416 ZNF790Q6PG37 636 aa22.03■■□□□ 1.12
LSM14A-208ENST00000590416 LAS1LQ9Y4W2 734 aaKnown RBP22.03■■□□□ 1.12
LSM14A-208ENST00000590416 UBR2Q8IWV8 1755 aa22.02■■□□□ 1.12
LSM14A-208ENST00000590416 ANO8Q9HCE9 1232 aaPredicted RBP22.02■■□□□ 1.12
LSM14A-208ENST00000590416 MIS18AQ9NYP9 233 aa22.02■■□□□ 1.12
LSM14A-208ENST00000590416 HMGB2P26583 209 aaKnown RBP22.01■■□□□ 1.11
LSM14A-208ENST00000590416 KCPQ6ZWJ8 1503 aa22.01■■□□□ 1.11
LSM14A-208ENST00000590416 PSDA5PKW4 1024 aaPredicted RBP22■■□□□ 1.11
LSM14A-208ENST00000590416 KCNQ3O43525 872 aa22■■□□□ 1.11
LSM14A-208ENST00000590416 R3HDM1Q15032 1099 aaKnown RBP22■■□□□ 1.11
LSM14A-208ENST00000590416 TSPYL4Q9UJ04 414 aa22■■□□□ 1.11
LSM14A-208ENST00000590416 C4BP0C0L5 1744 aa22■■□□□ 1.11
LSM14A-208ENST00000590416 KDM3BQ7LBC6 1761 aa21.99■■□□□ 1.11
LSM14A-208ENST00000590416 ZNF831Q5JPB2 1677 aa21.99■■□□□ 1.11
LSM14A-208ENST00000590416 ITPK1Q13572 414 aa21.99■■□□□ 1.11
LSM14A-208ENST00000590416 FMNL2Q96PY5 1086 aa21.99■■□□□ 1.11
LSM14A-208ENST00000590416 SLC4A9Q96Q91 983 aa21.99■■□□□ 1.11
LSM14A-208ENST00000590416 TJP1Q07157 1748 aa21.98■■□□□ 1.11
LSM14A-208ENST00000590416 CALD1Q05682 793 aaKnown RBP21.98■■□□□ 1.11
LSM14A-208ENST00000590416 SLC15A2Q16348 729 aa21.98■■□□□ 1.11
LSM14A-208ENST00000590416 LINC00116Q8NCU8 138 aa21.98■■□□□ 1.11
LSM14A-208ENST00000590416 ZNF496Q96IT1 587 aaPredicted RBP21.98■■□□□ 1.11
LSM14A-208ENST00000590416 AK7Q96M32 723 aa21.98■■□□□ 1.11
LSM14A-208ENST00000590416 ZNF827Q17R98 1081 aa21.97■■□□□ 1.11
LSM14A-208ENST00000590416 COL5A3P25940 1745 aaPredicted RBP21.97■■□□□ 1.11
LSM14A-208ENST00000590416 DNAJC10Q8IXB1 793 aa21.96■■□□□ 1.11
LSM14A-208ENST00000590416 TFCP2L1Q9NZI6 479 aa21.96■■□□□ 1.11
LSM14A-208ENST00000590416 TUBGCP6Q96RT7 1819 aa21.96■■□□□ 1.11
LSM14A-208ENST00000590416 HEG1Q9ULI3 1381 aa21.96■■□□□ 1.11
LSM14A-208ENST00000590416 CCDC27Q2M243 656 aa21.94■■□□□ 1.1
LSM14A-208ENST00000590416 VSIG10Q8N0Z9 540 aa21.94■■□□□ 1.1
LSM14A-208ENST00000590416 AKT1S1Q96B36 256 aa21.94■■□□□ 1.1
LSM14A-208ENST00000590416 WWC1Q8IX03 1113 aa21.93■■□□□ 1.1
LSM14A-208ENST00000590416 CICQ96RK0 1608 aaPredicted RBP21.93■■□□□ 1.1
LSM14A-208ENST00000590416 GNPATO15228 680 aa21.92■■□□□ 1.1
LSM14A-208ENST00000590416 MSH5O43196 834 aa21.92■■□□□ 1.1
LSM14A-208ENST00000590416 BABAM1Q9NWV8 329 aa21.92■■□□□ 1.1
LSM14A-208ENST00000590416 PHF14O94880 888 aa21.91■■□□□ 1.1
LSM14A-208ENST00000590416 CRKLP46109 303 aaKnown RBP21.91■■□□□ 1.1
LSM14A-208ENST00000590416 GNAI1P63096 354 aa21.91■■□□□ 1.1
LSM14A-208ENST00000590416 NCBP3Q53F19 620 aaKnown RBP21.91■■□□□ 1.1
LSM14A-208ENST00000590416 NGEFQ8N5V2 710 aa21.91■■□□□ 1.1
LSM14A-208ENST00000590416 CFAP44Q96MT7 982 aa21.91■■□□□ 1.1
LSM14A-208ENST00000590416 TEX13AQ9BXU3 409 aaPredicted RBP21.91■■□□□ 1.1
LSM14A-208ENST00000590416 IFT57Q9NWB7 429 aa21.91■■□□□ 1.1
LSM14A-208ENST00000590416 QSER1Q2KHR3 1735 aa21.91■■□□□ 1.1
LSM14A-208ENST00000590416 UBR3Q6ZT12 1888 aa21.9■■□□□ 1.1
LSM14A-208ENST00000590416 CNTNAP4Q9C0A0 1308 aa21.9■■□□□ 1.1
LSM14A-208ENST00000590416 STARD3NLO95772 234 aa21.9■■□□□ 1.1
LSM14A-208ENST00000590416 SNRPA1P09661 255 aaKnown RBP21.9■■□□□ 1.1
LSM14A-208ENST00000590416 EIF4A1P60842 406 aaKnown RBP21.9■■□□□ 1.1
LSM14A-208ENST00000590416 MYH14Q7Z406 1995 aaKnown RBP21.9■■□□□ 1.1
LSM14A-208ENST00000590416 CHL1O00533 1208 aa21.89■■□□□ 1.09
LSM14A-208ENST00000590416 LAMB4A4D0S4 1761 aa21.89■■□□□ 1.09
LSM14A-208ENST00000590416 PRAMEF22A3QJZ6 481 aa21.88■■□□□ 1.09
LSM14A-208ENST00000590416 CYP19A1P11511 503 aaPredicted RBP21.88■■□□□ 1.09
LSM14A-208ENST00000590416 MBIPQ9NS73 344 aa21.88■■□□□ 1.09
LSM14A-208ENST00000590416 CCDC87Q9NVE4 849 aa21.88■■□□□ 1.09
LSM14A-208ENST00000590416 RTCBQ9Y3I0 505 aaKnown RBP21.88■■□□□ 1.09
LSM14A-208ENST00000590416 RC3H1Q5TC82 1133 aaKnown RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 215.1 ms