RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 USP54Q70EL1 1684 aa15.15■□□□□ 0.02
PDE4A-207ENST00000590407 CUL4AQ13619 759 aa15.15■□□□□ 0.02
PDE4A-207ENST00000590407 CYB5RLQ6IPT4 315 aa15.15■□□□□ 0.02
PDE4A-207ENST00000590407 SRCIN1Q9C0H9 1055 aa15.15■□□□□ 0.02
PDE4A-207ENST00000590407 ESF1Q9H501 851 aaKnown RBP15.15■□□□□ 0.02
PDE4A-207ENST00000590407 ZDHHC9Q9Y397 364 aa15.15■□□□□ 0.02
PDE4A-207ENST00000590407 MTHFSDQ2M296 383 aaKnown RBP15.14■□□□□ 0.01
PDE4A-207ENST00000590407 ZSCAN23Q3MJ62 389 aa15.14■□□□□ 0.01
PDE4A-207ENST00000590407 ZSCAN30Q86W11 494 aa15.14■□□□□ 0.01
PDE4A-207ENST00000590407 INTS4Q96HW7 963 aaKnown RBP15.14■□□□□ 0.01
PDE4A-207ENST00000590407 NAP1L5Q96NT1 182 aaPredicted RBP15.14■□□□□ 0.01
PDE4A-207ENST00000590407 ATP8B2P98198 1209 aa15.13■□□□□ 0.01
PDE4A-207ENST00000590407 G2E3Q7L622 706 aa15.13■□□□□ 0.01
PDE4A-207ENST00000590407 PDLIM2Q96JY6 352 aa15.13■□□□□ 0.01
PDE4A-207ENST00000590407 ESYT1Q9BSJ8 1104 aa15.13■□□□□ 0.01
PDE4A-207ENST00000590407 STK31Q9BXU1 1019 aa15.13■□□□□ 0.01
PDE4A-207ENST00000590407 MCCP23508 829 aa15.13■□□□□ 0.01
PDE4A-207ENST00000590407 CCDC30Q5VVM6 783 aa15.13■□□□□ 0.01
PDE4A-207ENST00000590407 LRRCC1Q9C099 1032 aa15.13■□□□□ 0.01
PDE4A-207ENST00000590407 AK9Q5TCS8 1911 aa15.12■□□□□ 0.01
PDE4A-207ENST00000590407 MBD3O95983 291 aa15.12■□□□□ 0.01
PDE4A-207ENST00000590407 TPM2P07951 284 aa15.12■□□□□ 0.01
PDE4A-207ENST00000590407 MLECQ14165 292 aa15.12■□□□□ 0.01
PDE4A-207ENST00000590407 ZGPATQ8N5A5 531 aaKnown RBP15.12■□□□□ 0.01
PDE4A-207ENST00000590407 TERF1P54274 439 aa15.11■□□□□ 0.01
PDE4A-207ENST00000590407 PKP1Q13835 747 aa15.11■□□□□ 0.01
PDE4A-207ENST00000590407 CAVIN1Q6NZI2 390 aaKnown RBP15.11■□□□□ 0.01
PDE4A-207ENST00000590407 CEP170BQ9Y4F5 1589 aaPredicted RBP15.11■□□□□ 0.01
PDE4A-207ENST00000590407 BRD1O95696 1058 aa15.11■□□□□ 0.01
PDE4A-207ENST00000590407 MX1P20591 662 aa15.11■□□□□ 0.01
PDE4A-207ENST00000590407 FLIIQ13045 1269 aa15.11■□□□□ 0.01
PDE4A-207ENST00000590407 TMX3Q96JJ7 454 aa15.11■□□□□ 0.01
PDE4A-207ENST00000590407 SLIT1O75093 1534 aa15.1■□□□□ 0.01
PDE4A-207ENST00000590407 DIP2AQ14689 1571 aa15.1■□□□□ 0.01
PDE4A-207ENST00000590407 ARHGAP23Q9P227 1491 aa15.1■□□□□ 0.01
PDE4A-207ENST00000590407 GPT2Q8TD30 523 aa15.1■□□□□ 0.01
PDE4A-207ENST00000590407 ANKARQ7Z5J8 1434 aa15.1■□□□□ 0.01
PDE4A-207ENST00000590407 PIK3C2AO00443 1686 aa15.1■□□□□ 0.01
PDE4A-207ENST00000590407 F6X3S4 739 aa15.09■□□□□ 0.01
PDE4A-207ENST00000590407 RRP9O43818 475 aaKnown RBP15.09■□□□□ 0.01
PDE4A-207ENST00000590407 CHMLP26374 656 aa15.09■□□□□ 0.01
PDE4A-207ENST00000590407 SLC4A10Q6U841 1118 aa15.09■□□□□ 0.01
PDE4A-207ENST00000590407 EYA1Q99502 592 aa15.09■□□□□ 0.01
PDE4A-207ENST00000590407 NWD1Q149M9 1564 aa15.09■□□□□ 0.01
PDE4A-207ENST00000590407 FOXO3O43524 673 aa15.08■□□□□ 0.01
PDE4A-207ENST00000590407 LRSAM1Q6UWE0 723 aa15.08■□□□□ 0.01
PDE4A-207ENST00000590407 APBB1O00213 710 aa15.08■□□□□ 0
PDE4A-207ENST00000590407 PRPF40AO75400 957 aaKnown RBP15.08■□□□□ 0
PDE4A-207ENST00000590407 OFD1O75665 1012 aa15.08■□□□□ 0
PDE4A-207ENST00000590407 NEK4P51957 841 aa15.08■□□□□ 0
PDE4A-207ENST00000590407 KLHL34Q8N239 644 aa15.08■□□□□ 0
PDE4A-207ENST00000590407 TBX22Q9Y458 520 aa15.08■□□□□ 0
PDE4A-207ENST00000590407 GNAT3A8MTJ3 354 aa15.07■□□□□ 0
PDE4A-207ENST00000590407 RAB11FIP3O75154 756 aa15.07■□□□□ 0
PDE4A-207ENST00000590407 MCM5P33992 734 aa15.07■□□□□ 0
PDE4A-207ENST00000590407 RBSNQ9H1K0 784 aa15.07■□□□□ 0
PDE4A-207ENST00000590407 MIS18AQ9NYP9 233 aa15.07■□□□□ 0
PDE4A-207ENST00000590407 EXOC6BQ9Y2D4 811 aa15.07■□□□□ 0
PDE4A-207ENST00000590407 MAP3K5Q99683 1374 aa15.07■□□□□ 0
PDE4A-207ENST00000590407 PLEKHG5O94827 1062 aa15.06■□□□□ 0
PDE4A-207ENST00000590407 LTKP29376 864 aa15.06■□□□□ 0
PDE4A-207ENST00000590407 SSH3Q8TE77 659 aa15.06■□□□□ 0
PDE4A-207ENST00000590407 NOL7Q9UMY1 257 aaKnown RBP15.06■□□□□ 0
PDE4A-207ENST00000590407 PNMA6EA0A0J9YXQ4 647 aa15.06■□□□□ 0
PDE4A-207ENST00000590407 ZNF500O60304 480 aaPredicted RBP15.06■□□□□ 0
PDE4A-207ENST00000590407 PRIM1P49642 420 aaKnown RBP15.06■□□□□ 0
PDE4A-207ENST00000590407 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.06■□□□□ 0
PDE4A-207ENST00000590407 CHMP4AQ9BY43 222 aa15.06■□□□□ 0
PDE4A-207ENST00000590407 MARF1Q9Y4F3 1742 aaKnown RBP15.05■□□□□ 0
PDE4A-207ENST00000590407 NCLP19338 710 aaKnown RBP15.05■□□□□ -0
PDE4A-207ENST00000590407 AMPHP49418 695 aa15.05■□□□□ -0
PDE4A-207ENST00000590407 FKBP5Q13451 457 aaPredicted RBP15.05■□□□□ -0
PDE4A-207ENST00000590407 MSNP26038 577 aaKnown RBP15.04■□□□□ -0
PDE4A-207ENST00000590407 POLA2Q14181 598 aa15.04■□□□□ -0
PDE4A-207ENST00000590407 TAF7Q15545 349 aaPredicted RBP15.04■□□□□ -0
PDE4A-207ENST00000590407 TMEM63CQ9P1W3 806 aa15.04■□□□□ -0
PDE4A-207ENST00000590407 MED1Q15648 1581 aaPredicted RBP15.04■□□□□ -0
PDE4A-207ENST00000590407 KIF13AQ9H1H9 1805 aa15.03■□□□□ -0
PDE4A-207ENST00000590407 HOXB7P09629 217 aa15.03■□□□□ -0
PDE4A-207ENST00000590407 HSPA4P34932 840 aa15.03■□□□□ -0
PDE4A-207ENST00000590407 PLPPR3Q6T4P5 718 aa15.03■□□□□ -0
PDE4A-207ENST00000590407 SYAP1Q96A49 352 aaPredicted RBP15.03■□□□□ -0
PDE4A-207ENST00000590407 USP44Q9H0E7 712 aa15.03■□□□□ -0
PDE4A-207ENST00000590407 EID1Q9Y6B2 187 aa15.03■□□□□ -0
PDE4A-207ENST00000590407 CRYBG1Q9Y4K1 1723 aa15.03■□□□□ -0
PDE4A-207ENST00000590407 TMEM87AQ8NBN3 555 aa15.03■□□□□ -0
PDE4A-207ENST00000590407 PALD1Q9ULE6 856 aa15.03■□□□□ -0
PDE4A-207ENST00000590407 UBTFL1P0CB47 393 aaPredicted RBP15.02□□□□□ -0.01
PDE4A-207ENST00000590407 HOXC9P31274 260 aa15.02□□□□□ -0.01
PDE4A-207ENST00000590407 USP42Q9H9J4 1324 aaKnown RBP15.02□□□□□ -0.01
PDE4A-207ENST00000590407 ANO2Q9NQ90 1003 aa15.02□□□□□ -0.01
PDE4A-207ENST00000590407 AMOTL2Q9Y2J4 779 aa15.02□□□□□ -0.01
PDE4A-207ENST00000590407 LRRFIP2Q9Y608 721 aaKnown RBP15.02□□□□□ -0.01
PDE4A-207ENST00000590407 CEMIPQ8WUJ3 1361 aa15.01□□□□□ -0.01
PDE4A-207ENST00000590407 WDR33Q9C0J8 1336 aaKnown RBP15.01□□□□□ -0.01
PDE4A-207ENST00000590407 NGDNQ8NEJ9 315 aaKnown RBP15.01□□□□□ -0.01
PDE4A-207ENST00000590407 IL17REQ8NFR9 667 aa15.01□□□□□ -0.01
PDE4A-207ENST00000590407 RBM27Q9P2N5 1060 aaKnown RBP15.01□□□□□ -0.01
PDE4A-207ENST00000590407 PHF14O94880 888 aa15.01□□□□□ -0.01
PDE4A-207ENST00000590407 RGPD8O14715 1765 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms