RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 ATF5Q9Y2D1 282 aaPredicted RBP22.54■■□□□ 1.2
H3F3B-208ENST00000589599 GNAT3A8MTJ3 354 aa22.53■■□□□ 1.2
H3F3B-208ENST00000589599 SLC16A10Q8TF71 515 aa22.53■■□□□ 1.2
H3F3B-208ENST00000589599 PHACTR3Q96KR7 559 aa22.53■■□□□ 1.2
H3F3B-208ENST00000589599 AK7Q96M32 723 aa22.53■■□□□ 1.2
H3F3B-208ENST00000589599 RBM42Q9BTD8 480 aaKnown RBP22.53■■□□□ 1.2
H3F3B-208ENST00000589599 SLC52A2Q9HAB3 445 aa22.53■■□□□ 1.2
H3F3B-208ENST00000589599 NEFMP07197 916 aa22.52■■□□□ 1.2
H3F3B-208ENST00000589599 FLAD1Q8NFF5 587 aa22.52■■□□□ 1.2
H3F3B-208ENST00000589599 PNPLA7Q6ZV29 1317 aa22.52■■□□□ 1.2
H3F3B-208ENST00000589599 MYBBP1AQ9BQG0 1328 aaKnown RBP22.52■■□□□ 1.2
H3F3B-208ENST00000589599 ZNF316A6NFI3 1004 aaPredicted RBP22.51■■□□□ 1.19
H3F3B-208ENST00000589599 MSH5O43196 834 aa22.51■■□□□ 1.19
H3F3B-208ENST00000589599 MAP3K5Q99683 1374 aa22.5■■□□□ 1.19
H3F3B-208ENST00000589599 PNNQ9H307 717 aaKnown RBP22.5■■□□□ 1.19
H3F3B-208ENST00000589599 CASZ1Q86V15 1759 aa22.49■■□□□ 1.19
H3F3B-208ENST00000589599 PTCD1O75127 700 aaKnown RBP22.49■■□□□ 1.19
H3F3B-208ENST00000589599 ITPK1Q13572 414 aa22.49■■□□□ 1.19
H3F3B-208ENST00000589599 TEFQ10587 303 aa22.48■■□□□ 1.19
H3F3B-208ENST00000589599 LINC00116Q8NCU8 138 aa22.48■■□□□ 1.19
H3F3B-208ENST00000589599 COL23A1Q86Y22 540 aaPredicted RBP22.47■■□□□ 1.19
H3F3B-208ENST00000589599 PTGER2P43116 358 aa22.46■■□□□ 1.19
H3F3B-208ENST00000589599 IL17REQ8NFR9 667 aa22.46■■□□□ 1.19
H3F3B-208ENST00000589599 RTF1Q92541 710 aaKnown RBP22.46■■□□□ 1.19
H3F3B-208ENST00000589599 SLC4A9Q96Q91 983 aa22.45■■□□□ 1.18
H3F3B-208ENST00000589599 PRKRIP1Q9H875 184 aaPredicted RBP22.45■■□□□ 1.18
H3F3B-208ENST00000589599 C5P01031 1676 aa22.44■■□□□ 1.18
H3F3B-208ENST00000589599 POLD1P28340 1107 aa22.44■■□□□ 1.18
H3F3B-208ENST00000589599 SCN11AQ9UI33 1791 aa22.43■■□□□ 1.18
H3F3B-208ENST00000589599 GNPATO15228 680 aa22.43■■□□□ 1.18
H3F3B-208ENST00000589599 RC3H1Q5TC82 1133 aaKnown RBP22.43■■□□□ 1.18
H3F3B-208ENST00000589599 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.42■■□□□ 1.18
H3F3B-208ENST00000589599 HTATSF1O43719 755 aaKnown RBP22.42■■□□□ 1.18
H3F3B-208ENST00000589599 PHF14O94880 888 aa22.42■■□□□ 1.18
H3F3B-208ENST00000589599 SSFA2P28290 1259 aa22.42■■□□□ 1.18
H3F3B-208ENST00000589599 SLC39A6Q13433 755 aa22.42■■□□□ 1.18
H3F3B-208ENST00000589599 TTC5Q8N0Z6 440 aa22.42■■□□□ 1.18
H3F3B-208ENST00000589599 MRC1P22897 1456 aa22.41■■□□□ 1.18
H3F3B-208ENST00000589599 MAPK8IP3Q9UPT6 1336 aa22.41■■□□□ 1.18
H3F3B-208ENST00000589599 C4BP0C0L5 1744 aa22.41■■□□□ 1.18
H3F3B-208ENST00000589599 ARXQ96QS3 562 aa22.41■■□□□ 1.18
H3F3B-208ENST00000589599 SGIP1Q9BQI5 828 aa22.41■■□□□ 1.18
H3F3B-208ENST00000589599 QSER1Q2KHR3 1735 aa22.4■■□□□ 1.18
H3F3B-208ENST00000589599 RTCBQ9Y3I0 505 aaKnown RBP22.4■■□□□ 1.18
H3F3B-208ENST00000589599 CNTNAP4Q9C0A0 1308 aa22.39■■□□□ 1.18
H3F3B-208ENST00000589599 WDR43Q15061 677 aaKnown RBP eCLIP22.39■■□□□ 1.17
H3F3B-208ENST00000589599 PLEKHF1Q96S99 279 aa22.39■■□□□ 1.17
H3F3B-208ENST00000589599 CEMIPQ8WUJ3 1361 aa22.38■■□□□ 1.17
H3F3B-208ENST00000589599 TAF1LQ8IZX4 1826 aa22.38■■□□□ 1.17
H3F3B-208ENST00000589599 TRAPPC3LQ5T215 181 aa22.38■■□□□ 1.17
H3F3B-208ENST00000589599 ADAMTS7Q9UKP4 1686 aa22.37■■□□□ 1.17
H3F3B-208ENST00000589599 BTBD11A6QL63 1104 aa22.37■■□□□ 1.17
H3F3B-208ENST00000589599 NFE2L2Q16236 605 aa22.37■■□□□ 1.17
H3F3B-208ENST00000589599 MCM10Q7L590 875 aa22.37■■□□□ 1.17
H3F3B-208ENST00000589599 AMIGO3Q86WK7 504 aa22.37■■□□□ 1.17
H3F3B-208ENST00000589599 VSIG10Q8N0Z9 540 aa22.37■■□□□ 1.17
H3F3B-208ENST00000589599 ZNF831Q5JPB2 1677 aa22.36■■□□□ 1.17
H3F3B-208ENST00000589599 RPS6KA4O75676 772 aa22.36■■□□□ 1.17
H3F3B-208ENST00000589599 ADRA2BP18089 450 aa22.36■■□□□ 1.17
H3F3B-208ENST00000589599 ZNF790Q6PG37 636 aa22.36■■□□□ 1.17
H3F3B-208ENST00000589599 SMIM5Q71RC9 77 aa22.36■■□□□ 1.17
H3F3B-208ENST00000589599 DNAJC10Q8IXB1 793 aa22.36■■□□□ 1.17
H3F3B-208ENST00000589599 CRKLP46109 303 aaKnown RBP22.35■■□□□ 1.17
H3F3B-208ENST00000589599 MSL1Q68DK7 614 aa22.35■■□□□ 1.17
H3F3B-208ENST00000589599 DCAF8L1A6NGE4 600 aa22.34■■□□□ 1.17
H3F3B-208ENST00000589599 DCTN1Q14203 1278 aa22.34■■□□□ 1.17
H3F3B-208ENST00000589599 FHDC1Q9C0D6 1143 aaPredicted RBP22.34■■□□□ 1.17
H3F3B-208ENST00000589599 TUBGCP6Q96RT7 1819 aa22.34■■□□□ 1.17
H3F3B-208ENST00000589599 RFC4P35249 363 aa22.33■■□□□ 1.17
H3F3B-208ENST00000589599 FMNL2Q96PY5 1086 aa22.33■■□□□ 1.17
H3F3B-208ENST00000589599 TEX13AQ9BXU3 409 aaPredicted RBP22.33■■□□□ 1.17
H3F3B-208ENST00000589599 STARD3NLO95772 234 aa22.32■■□□□ 1.16
H3F3B-208ENST00000589599 CYP19A1P11511 503 aaPredicted RBP22.32■■□□□ 1.16
H3F3B-208ENST00000589599 ARHGEF1Q92888 912 aaKnown RBP22.32■■□□□ 1.16
H3F3B-208ENST00000589599 ZNF496Q96IT1 587 aaPredicted RBP22.32■■□□□ 1.16
H3F3B-208ENST00000589599 CCDC87Q9NVE4 849 aa22.32■■□□□ 1.16
H3F3B-208ENST00000589599 TAF7Q15545 349 aaPredicted RBP22.31■■□□□ 1.16
H3F3B-208ENST00000589599 INTS5Q6P9B9 1019 aaKnown RBP22.31■■□□□ 1.16
H3F3B-208ENST00000589599 SYT17Q9BSW7 474 aa22.31■■□□□ 1.16
H3F3B-208ENST00000589599 ANP32CO43423 234 aa22.3■■□□□ 1.16
H3F3B-208ENST00000589599 KLHL34Q8N239 644 aa22.3■■□□□ 1.16
H3F3B-208ENST00000589599 KCPQ6ZWJ8 1503 aa22.3■■□□□ 1.16
H3F3B-208ENST00000589599 RIPK4P57078 832 aa22.29■■□□□ 1.16
H3F3B-208ENST00000589599 PNISRQ8TF01 805 aaKnown RBP22.29■■□□□ 1.16
H3F3B-208ENST00000589599 ADAMTS8Q9UP79 889 aa22.29■■□□□ 1.16
H3F3B-208ENST00000589599 UBR3Q6ZT12 1888 aa22.28■■□□□ 1.16
H3F3B-208ENST00000589599 HEG1Q9ULI3 1381 aa22.28■■□□□ 1.16
H3F3B-208ENST00000589599 CCDC146Q8IYE0 955 aa22.28■■□□□ 1.16
H3F3B-208ENST00000589599 NLGN1Q8N2Q7 840 aa22.28■■□□□ 1.16
H3F3B-208ENST00000589599 RUNDC1Q96C34 613 aa22.28■■□□□ 1.16
H3F3B-208ENST00000589599 VIRMAQ69YN4 1812 aaKnown RBP22.27■■□□□ 1.16
H3F3B-208ENST00000589599 KCNQ3O43525 872 aa22.27■■□□□ 1.16
H3F3B-208ENST00000589599 LMOD3Q0VAK6 560 aa22.27■■□□□ 1.16
H3F3B-208ENST00000589599 TMPOP42166 694 aaKnown RBP22.26■■□□□ 1.15
H3F3B-208ENST00000589599 COL5A3P25940 1745 aaPredicted RBP22.26■■□□□ 1.15
H3F3B-208ENST00000589599 TJP1Q07157 1748 aa22.24■■□□□ 1.15
H3F3B-208ENST00000589599 SNRPA1P09661 255 aaKnown RBP22.24■■□□□ 1.15
H3F3B-208ENST00000589599 CANXP27824 592 aaKnown RBP22.24■■□□□ 1.15
H3F3B-208ENST00000589599 MIS18AQ9NYP9 233 aa22.24■■□□□ 1.15
H3F3B-208ENST00000589599 SOS1Q07889 1333 aaPredicted RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms