RNA–Protein interactions for RNA: ENST00000589447.1

LINC01539-203, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-203ENST00000589447 EP400Q96L91 3159 aa4.21□□□□□ -1.74
LINC01539-203ENST00000589447 C2orf72A6NCS6 295 aa4.21□□□□□ -1.74
LINC01539-203ENST00000589447 TBC1D12O60347 775 aa4.21□□□□□ -1.74
LINC01539-203ENST00000589447 CLSTN1O94985 981 aa4.21□□□□□ -1.74
LINC01539-203ENST00000589447 CSB-PGBD3P0DP91 1061 aa4.21□□□□□ -1.74
LINC01539-203ENST00000589447 PPP2R1AP30153 589 aa4.21□□□□□ -1.74
LINC01539-203ENST00000589447 PTGER2P43116 358 aa4.21□□□□□ -1.74
LINC01539-203ENST00000589447 SKIV2LQ15477 1246 aaKnown RBP4.21□□□□□ -1.74
LINC01539-203ENST00000589447 TSR1Q2NL82 804 aaKnown RBP4.21□□□□□ -1.74
LINC01539-203ENST00000589447 GPR153Q6NV75 609 aa4.21□□□□□ -1.74
LINC01539-203ENST00000589447 SKAP1Q86WV1 359 aa4.21□□□□□ -1.74
LINC01539-203ENST00000589447 WWC1Q8IX03 1113 aa4.21□□□□□ -1.74
LINC01539-203ENST00000589447 SREK1Q8WXA9 508 aaKnown RBP4.21□□□□□ -1.74
LINC01539-203ENST00000589447 TRIM44Q96DX7 344 aaPredicted RBP4.21□□□□□ -1.74
LINC01539-203ENST00000589447 DDX27Q96GQ7 796 aaKnown RBP4.21□□□□□ -1.74
LINC01539-203ENST00000589447 STAC3Q96MF2 364 aa4.21□□□□□ -1.74
LINC01539-203ENST00000589447 TESK2Q96S53 571 aa4.21□□□□□ -1.74
LINC01539-203ENST00000589447 LARP6Q9BRS8 491 aaKnown RBP4.21□□□□□ -1.74
LINC01539-203ENST00000589447 SLKQ9H2G2 1235 aaPredicted RBP4.21□□□□□ -1.74
LINC01539-203ENST00000589447 RRAGDQ9NQL2 400 aaPredicted RBP4.21□□□□□ -1.74
LINC01539-203ENST00000589447 CHMP5Q9NZZ3 219 aa4.21□□□□□ -1.74
LINC01539-203ENST00000589447 ADAMTS8Q9UP79 889 aa4.21□□□□□ -1.74
LINC01539-203ENST00000589447 GNEQ9Y223 722 aaKnown RBP4.21□□□□□ -1.74
LINC01539-203ENST00000589447 IVNS1ABPQ9Y6Y0 642 aa4.21□□□□□ -1.74
LINC01539-203ENST00000589447 DIP2AQ14689 1571 aa4.21□□□□□ -1.74
LINC01539-203ENST00000589447 ABCA3Q99758 1704 aa4.21□□□□□ -1.74
LINC01539-203ENST00000589447 IFT172Q9UG01 1749 aa4.21□□□□□ -1.74
LINC01539-203ENST00000589447 MARF1Q9Y4F3 1742 aaKnown RBP4.21□□□□□ -1.74
LINC01539-203ENST00000589447 LRP6O75581 1613 aa4.21□□□□□ -1.74
LINC01539-203ENST00000589447 CLTCL1P53675 1640 aa4.21□□□□□ -1.74
LINC01539-203ENST00000589447 LMTK2Q8IWU2 1503 aa4.21□□□□□ -1.74
LINC01539-203ENST00000589447 ZC3H4Q9UPT8 1303 aaKnown RBP4.21□□□□□ -1.74
LINC01539-203ENST00000589447 FSD2A1L4K1 749 aa4.2□□□□□ -1.74
LINC01539-203ENST00000589447 PSDA5PKW4 1024 aaPredicted RBP4.2□□□□□ -1.74
LINC01539-203ENST00000589447 SPDYE16A6NNV3 312 aaPredicted RBP4.2□□□□□ -1.74
LINC01539-203ENST00000589447 MCM4P33991 863 aa4.2□□□□□ -1.74
LINC01539-203ENST00000589447 FOXK1P85037 733 aa4.2□□□□□ -1.74
LINC01539-203ENST00000589447 HSCBQ8IWL3 235 aa4.2□□□□□ -1.74
LINC01539-203ENST00000589447 TRMT2AQ8IZ69 625 aaKnown RBP4.2□□□□□ -1.74
LINC01539-203ENST00000589447 OXER1Q8TDS5 423 aa4.2□□□□□ -1.74
LINC01539-203ENST00000589447 ANP32BQ92688 251 aaKnown RBP4.2□□□□□ -1.74
LINC01539-203ENST00000589447 TBC1D32Q96NH3 1257 aa4.2□□□□□ -1.74
LINC01539-203ENST00000589447 CRISPLD2Q9H0B8 497 aa4.2□□□□□ -1.74
LINC01539-203ENST00000589447 RWDD1Q9H446 243 aaPredicted RBP4.2□□□□□ -1.74
LINC01539-203ENST00000589447 ANTXR1Q9H6X2 564 aa4.2□□□□□ -1.74
LINC01539-203ENST00000589447 USP19O94966 1318 aa4.2□□□□□ -1.74
LINC01539-203ENST00000589447 PPLO60437 1756 aa4.19□□□□□ -1.74
LINC01539-203ENST00000589447 SOCS7O14512 581 aa4.19□□□□□ -1.74
LINC01539-203ENST00000589447 SMARCA5O60264 1052 aaPredicted RBP4.19□□□□□ -1.74
LINC01539-203ENST00000589447 PPP1R37O75864 691 aa4.19□□□□□ -1.74
LINC01539-203ENST00000589447 XRCC6P12956 609 aaKnown RBP eCLIP4.19□□□□□ -1.74
LINC01539-203ENST00000589447 HSPA1LP34931 641 aa4.19□□□□□ -1.74
LINC01539-203ENST00000589447 PBX2P40425 430 aa4.19□□□□□ -1.74
LINC01539-203ENST00000589447 MMRN1Q13201 1228 aa4.19□□□□□ -1.74
LINC01539-203ENST00000589447 SKOR2Q2VWA4 1001 aaPredicted RBP4.19□□□□□ -1.74
LINC01539-203ENST00000589447 CALR3Q96L12 384 aaKnown RBP4.19□□□□□ -1.74
LINC01539-203ENST00000589447 GBP4Q96PP9 640 aa4.19□□□□□ -1.74
LINC01539-203ENST00000589447 KRTAP3-3Q9BYR6 98 aa4.19□□□□□ -1.74
LINC01539-203ENST00000589447 KRTAP3-2Q9BYR7 98 aa4.19□□□□□ -1.74
LINC01539-203ENST00000589447 MYH16Q9H6N6 1097 aa4.19□□□□□ -1.74
LINC01539-203ENST00000589447 GRPEL1Q9HAV7 217 aa4.19□□□□□ -1.74
LINC01539-203ENST00000589447 GPHNQ9NQX3 736 aaPredicted RBP4.19□□□□□ -1.74
LINC01539-203ENST00000589447 KIAA1522Q9P206 1035 aaPredicted RBP4.19□□□□□ -1.74
LINC01539-203ENST00000589447 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.19□□□□□ -1.74
LINC01539-203ENST00000589447 NCOA3Q9Y6Q9 1424 aa4.19□□□□□ -1.74
LINC01539-203ENST00000589447 QRICH2Q9H0J4 1663 aa4.19□□□□□ -1.74
LINC01539-203ENST00000589447 ADGRB2O60241 1585 aa4.19□□□□□ -1.74
LINC01539-203ENST00000589447 MYOM2P54296 1465 aa4.18□□□□□ -1.74
LINC01539-203ENST00000589447 ANKRD26Q9UPS8 1709 aa4.18□□□□□ -1.74
LINC01539-203ENST00000589447 POLR3AO14802 1390 aaPredicted RBP4.18□□□□□ -1.74
LINC01539-203ENST00000589447 RGPD8O14715 1765 aaPredicted RBP4.18□□□□□ -1.74
LINC01539-203ENST00000589447 ESPNB1AK53 854 aa4.18□□□□□ -1.74
LINC01539-203ENST00000589447 UBAP1LF5GYI3 381 aa4.18□□□□□ -1.74
LINC01539-203ENST00000589447 TCF3P15923 654 aa4.18□□□□□ -1.74
LINC01539-203ENST00000589447 SRPK2P78362 688 aaKnown RBP4.18□□□□□ -1.74
LINC01539-203ENST00000589447 CCDC173Q0VFZ6 552 aa4.18□□□□□ -1.74
LINC01539-203ENST00000589447 TTLL12Q14166 644 aaPredicted RBP4.18□□□□□ -1.74
LINC01539-203ENST00000589447 NBPF1Q3BBV0 1214 aa4.18□□□□□ -1.74
LINC01539-203ENST00000589447 VARS2Q5ST30 1063 aaKnown RBP4.18□□□□□ -1.74
LINC01539-203ENST00000589447 GGT6Q6P531 493 aa4.18□□□□□ -1.74
LINC01539-203ENST00000589447 TXNDC2Q86VQ3 553 aa4.18□□□□□ -1.74
LINC01539-203ENST00000589447 TICAM2Q86XR7 235 aa4.18□□□□□ -1.74
LINC01539-203ENST00000589447 SPNS2Q8IVW8 549 aa4.18□□□□□ -1.74
LINC01539-203ENST00000589447 ZNF687Q8N1G0 1237 aa4.18□□□□□ -1.74
LINC01539-203ENST00000589447 PTCD2Q8WV60 388 aaKnown RBP4.18□□□□□ -1.74
LINC01539-203ENST00000589447 UBXN4Q92575 508 aa4.18□□□□□ -1.74
LINC01539-203ENST00000589447 MRRFQ96E11 262 aaKnown RBP4.18□□□□□ -1.74
LINC01539-203ENST00000589447 SIRT1Q96EB6 747 aa4.18□□□□□ -1.74
LINC01539-203ENST00000589447 MAP7D2Q96T17 732 aa4.18□□□□□ -1.74
LINC01539-203ENST00000589447 TBC1D2Q9BYX2 928 aa4.18□□□□□ -1.74
LINC01539-203ENST00000589447 ZFYVE9O95405 1425 aa4.18□□□□□ -1.74
LINC01539-203ENST00000589447 AHDC1Q5TGY3 1603 aaPredicted RBP4.17□□□□□ -1.74
LINC01539-203ENST00000589447 KANK1Q14678 1352 aa4.17□□□□□ -1.74
LINC01539-203ENST00000589447 IBTKQ9P2D0 1353 aaPredicted RBP4.17□□□□□ -1.74
LINC01539-203ENST00000589447 SRCAPQ6ZRS2 3230 aa4.17□□□□□ -1.74
LINC01539-203ENST00000589447 BRWD3Q6RI45 1802 aa4.17□□□□□ -1.74
LINC01539-203ENST00000589447 POTEB3A0JP26 581 aa4.17□□□□□ -1.74
LINC01539-203ENST00000589447 GOLGA6L22H0YM25 854 aa4.17□□□□□ -1.74
LINC01539-203ENST00000589447 GNPATO15228 680 aa4.17□□□□□ -1.74
LINC01539-203ENST00000589447 BCAR3O75815 825 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms