RNA–Protein interactions for RNA: ENST00000589223.5

AP3D1-206, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 2

Gene AP3D1, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-206ENST00000589223 SLC39A6Q13433 755 aa14.82□□□□□ -0.04
AP3D1-206ENST00000589223 INTS3Q68E01 1043 aaKnown RBP14.82□□□□□ -0.04
AP3D1-206ENST00000589223 CHPF2Q9P2E5 772 aa14.82□□□□□ -0.04
AP3D1-206ENST00000589223 OVOS2A0A0J9YW53 1432 aa14.82□□□□□ -0.04
AP3D1-206ENST00000589223 OVOS2Q6IE36 1432 aa14.82□□□□□ -0.04
AP3D1-206ENST00000589223 KNDC1Q76NI1 1749 aa14.82□□□□□ -0.04
AP3D1-206ENST00000589223 NBPF7P0C2Y1 421 aaPredicted RBP14.82□□□□□ -0.04
AP3D1-206ENST00000589223 PROSER3Q2NL68 480 aa14.82□□□□□ -0.04
AP3D1-206ENST00000589223 PHF8Q9UPP1 1060 aa14.82□□□□□ -0.04
AP3D1-206ENST00000589223 PIK3R4Q99570 1358 aa14.81□□□□□ -0.04
AP3D1-206ENST00000589223 ITSN1Q15811 1721 aa14.81□□□□□ -0.04
AP3D1-206ENST00000589223 PALD1Q9ULE6 856 aa14.81□□□□□ -0.04
AP3D1-206ENST00000589223 XRCC6P12956 609 aaKnown RBP eCLIP14.81□□□□□ -0.04
AP3D1-206ENST00000589223 ANO2Q9NQ90 1003 aa14.81□□□□□ -0.04
AP3D1-206ENST00000589223 CRB1P82279 1406 aa14.8□□□□□ -0.04
AP3D1-206ENST00000589223 ATP10DQ9P241 1426 aa14.8□□□□□ -0.04
AP3D1-206ENST00000589223 FLT4P35916 1363 aa14.8□□□□□ -0.04
AP3D1-206ENST00000589223 SIRT1Q96EB6 747 aa14.8□□□□□ -0.04
AP3D1-206ENST00000589223 PA2G4Q9UQ80 394 aaKnown RBP14.8□□□□□ -0.04
AP3D1-206ENST00000589223 PI4KAP2A4QPH2 592 aa14.79□□□□□ -0.04
AP3D1-206ENST00000589223 CPA1P15085 419 aa14.79□□□□□ -0.04
AP3D1-206ENST00000589223 RBM25P49756 843 aaKnown RBP14.79□□□□□ -0.04
AP3D1-206ENST00000589223 GAS2L3Q86XJ1 694 aa14.79□□□□□ -0.04
AP3D1-206ENST00000589223 PI4KAP1Q8N8J0 262 aa14.79□□□□□ -0.04
AP3D1-206ENST00000589223 MON2Q7Z3U7 1717 aa14.79□□□□□ -0.04
AP3D1-206ENST00000589223 VIRMAQ69YN4 1812 aaKnown RBP14.79□□□□□ -0.04
AP3D1-206ENST00000589223 SURF6O75683 361 aaKnown RBP14.79□□□□□ -0.04
AP3D1-206ENST00000589223 TAF7Q15545 349 aaPredicted RBP14.79□□□□□ -0.04
AP3D1-206ENST00000589223 CHRNA2Q15822 529 aa14.79□□□□□ -0.04
AP3D1-206ENST00000589223 ZNF530Q6P9A1 599 aaPredicted RBP14.79□□□□□ -0.04
AP3D1-206ENST00000589223 AXIN2Q9Y2T1 843 aa14.79□□□□□ -0.04
AP3D1-206ENST00000589223 K7ELQ4 463 aaPredicted RBP14.79□□□□□ -0.04
AP3D1-206ENST00000589223 CWF19L2Q2TBE0 894 aaKnown RBP14.79□□□□□ -0.04
AP3D1-206ENST00000589223 MCTP1Q6DN14 999 aa14.79□□□□□ -0.04
AP3D1-206ENST00000589223 KLHDC4Q8TBB5 520 aa14.78□□□□□ -0.04
AP3D1-206ENST00000589223 GNAI2P04899 355 aa14.78□□□□□ -0.04
AP3D1-206ENST00000589223 PDE1AP54750 535 aa14.78□□□□□ -0.04
AP3D1-206ENST00000589223 ANKLE2Q86XL3 938 aa14.78□□□□□ -0.04
AP3D1-206ENST00000589223 FER1L4A9Z1Z3 1794 aa14.78□□□□□ -0.04
AP3D1-206ENST00000589223 SIL1Q9H173 461 aa14.77□□□□□ -0.04
AP3D1-206ENST00000589223 MYL6BP14649 208 aa14.77□□□□□ -0.04
AP3D1-206ENST00000589223 NEK4P51957 841 aa14.77□□□□□ -0.04
AP3D1-206ENST00000589223 DIP2AQ14689 1571 aa14.77□□□□□ -0.05
AP3D1-206ENST00000589223 AKAP12Q02952 1782 aa14.77□□□□□ -0.05
AP3D1-206ENST00000589223 MPNDQ8N594 471 aa14.77□□□□□ -0.05
AP3D1-206ENST00000589223 USP26Q9BXU7 913 aa14.77□□□□□ -0.05
AP3D1-206ENST00000589223 GDPD2Q9HCC8 539 aa14.77□□□□□ -0.05
AP3D1-206ENST00000589223 IGSF1Q8N6C5 1336 aa14.77□□□□□ -0.05
AP3D1-206ENST00000589223 GOLGA6L3A6NEY3 463 aa14.76□□□□□ -0.05
AP3D1-206ENST00000589223 BRPF1P55201 1214 aaPredicted RBP14.76□□□□□ -0.05
AP3D1-206ENST00000589223 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
AP3D1-206ENST00000589223 USP44Q9H0E7 712 aa14.76□□□□□ -0.05
AP3D1-206ENST00000589223 RBM27Q9P2N5 1060 aaKnown RBP14.76□□□□□ -0.05
AP3D1-206ENST00000589223 NDUFB9Q9Y6M9 179 aa14.76□□□□□ -0.05
AP3D1-206ENST00000589223 SBNO1A3KN83 1393 aa14.76□□□□□ -0.05
AP3D1-206ENST00000589223 SRGAP3O43295 1099 aa14.76□□□□□ -0.05
AP3D1-206ENST00000589223 TEFQ10587 303 aa14.76□□□□□ -0.05
AP3D1-206ENST00000589223 OS9Q13438 667 aaPredicted RBP14.76□□□□□ -0.05
AP3D1-206ENST00000589223 PPP1R42Q7Z4L9 355 aa14.76□□□□□ -0.05
AP3D1-206ENST00000589223 UBTFL1P0CB47 393 aaPredicted RBP14.75□□□□□ -0.05
AP3D1-206ENST00000589223 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.75□□□□□ -0.05
AP3D1-206ENST00000589223 HSPA2P54652 639 aa14.75□□□□□ -0.05
AP3D1-206ENST00000589223 CCDC30Q5VVM6 783 aa14.75□□□□□ -0.05
AP3D1-206ENST00000589223 RPAP2Q8IXW5 612 aaPredicted RBP14.74□□□□□ -0.05
AP3D1-206ENST00000589223 BTBD11A6QL63 1104 aa14.74□□□□□ -0.05
AP3D1-206ENST00000589223 SPG7Q9UQ90 795 aa14.74□□□□□ -0.05
AP3D1-206ENST00000589223 SSH2Q76I76 1423 aa14.74□□□□□ -0.05
AP3D1-206ENST00000589223 SOS1Q07889 1333 aaPredicted RBP14.73□□□□□ -0.05
AP3D1-206ENST00000589223 LRRCC1Q9C099 1032 aa14.73□□□□□ -0.05
AP3D1-206ENST00000589223 NLRP2Q9NX02 1062 aa14.73□□□□□ -0.05
AP3D1-206ENST00000589223 CHGBP05060 677 aa14.73□□□□□ -0.05
AP3D1-206ENST00000589223 MX1P20591 662 aa14.73□□□□□ -0.05
AP3D1-206ENST00000589223 COL9A3Q14050 684 aaPredicted RBP14.73□□□□□ -0.05
AP3D1-206ENST00000589223 DDX49Q9Y6V7 483 aaKnown RBP14.72□□□□□ -0.05
AP3D1-206ENST00000589223 USP31Q70CQ4 1352 aa14.72□□□□□ -0.05
AP3D1-206ENST00000589223 HMMRO75330 724 aa14.71□□□□□ -0.05
AP3D1-206ENST00000589223 PTPRCP08575 1304 aa14.71□□□□□ -0.05
AP3D1-206ENST00000589223 GCP02774 474 aa14.71□□□□□ -0.05
AP3D1-206ENST00000589223 CAVIN1Q6NZI2 390 aaKnown RBP14.71□□□□□ -0.05
AP3D1-206ENST00000589223 CWC27Q6UX04 472 aaKnown RBP14.71□□□□□ -0.05
AP3D1-206ENST00000589223 TCEANC2Q96MN5 208 aa14.71□□□□□ -0.05
AP3D1-206ENST00000589223 ARID3AQ99856 593 aa14.71□□□□□ -0.05
AP3D1-206ENST00000589223 CHMP4BQ9H444 224 aaKnown RBP14.71□□□□□ -0.05
AP3D1-206ENST00000589223 TAOK2Q9UL54 1235 aa14.71□□□□□ -0.05
AP3D1-206ENST00000589223 NSFL1CQ9UNZ2 370 aaKnown RBP14.71□□□□□ -0.05
AP3D1-206ENST00000589223 ZNF330Q9Y3S2 320 aaPredicted RBP14.71□□□□□ -0.05
AP3D1-206ENST00000589223 TTC21AQ8NDW8 1320 aa14.71□□□□□ -0.05
AP3D1-206ENST00000589223 PRPF40AO75400 957 aaKnown RBP14.71□□□□□ -0.06
AP3D1-206ENST00000589223 CCT4P50991 539 aaKnown RBP14.71□□□□□ -0.06
AP3D1-206ENST00000589223 PIK3C2AO00443 1686 aa14.71□□□□□ -0.06
AP3D1-206ENST00000589223 PPFIA3O75145 1194 aa14.7□□□□□ -0.06
AP3D1-206ENST00000589223 PROSER2Q86WR7 435 aaPredicted RBP14.7□□□□□ -0.06
AP3D1-206ENST00000589223 MAP3K5Q99683 1374 aa14.7□□□□□ -0.06
AP3D1-206ENST00000589223 CSB-PGBD3P0DP91 1061 aa14.7□□□□□ -0.06
AP3D1-206ENST00000589223 ANKRD24Q8TF21 1146 aa14.7□□□□□ -0.06
AP3D1-206ENST00000589223 NRKQ7Z2Y5 1582 aa14.7□□□□□ -0.06
AP3D1-206ENST00000589223 ARHGAP23Q9P227 1491 aa14.69□□□□□ -0.06
AP3D1-206ENST00000589223 EDC3Q96F86 508 aaKnown RBP14.69□□□□□ -0.06
AP3D1-206ENST00000589223 ARHGEF10O15013 1369 aa14.69□□□□□ -0.06
AP3D1-206ENST00000589223 RAB3GAP1Q15042 981 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms