RNA–Protein interactions for RNA: ENST00000589201.1

LINC00654-202, long intergenic non-protein coding RNA 654, humanhuman

TSL 3 BASIC

Gene LINC00654, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-202ENST00000589201 C5P01031 1676 aa26.52■■□□□ 1.84
LINC00654-202ENST00000589201 PNPLA7Q6ZV29 1317 aa26.52■■□□□ 1.84
LINC00654-202ENST00000589201 TAF1LQ8IZX4 1826 aa26.52■■□□□ 1.84
LINC00654-202ENST00000589201 MYBBP1AQ9BQG0 1328 aaKnown RBP26.51■■□□□ 1.83
LINC00654-202ENST00000589201 HMGB2P26583 209 aaKnown RBP26.51■■□□□ 1.83
LINC00654-202ENST00000589201 ATP6V1AP38606 617 aa26.51■■□□□ 1.83
LINC00654-202ENST00000589201 RBM42Q9BTD8 480 aaKnown RBP26.51■■□□□ 1.83
LINC00654-202ENST00000589201 SLC52A2Q9HAB3 445 aa26.51■■□□□ 1.83
LINC00654-202ENST00000589201 ATF5Q9Y2D1 282 aaPredicted RBP26.51■■□□□ 1.83
LINC00654-202ENST00000589201 GNAT3A8MTJ3 354 aa26.5■■□□□ 1.83
LINC00654-202ENST00000589201 ITPK1Q13572 414 aa26.5■■□□□ 1.83
LINC00654-202ENST00000589201 SLC4A9Q96Q91 983 aa26.5■■□□□ 1.83
LINC00654-202ENST00000589201 VIRMAQ69YN4 1812 aaKnown RBP26.49■■□□□ 1.83
LINC00654-202ENST00000589201 TUBGCP6Q96RT7 1819 aa26.49■■□□□ 1.83
LINC00654-202ENST00000589201 LINC00116Q8NCU8 138 aa26.49■■□□□ 1.83
LINC00654-202ENST00000589201 MAP3K5Q99683 1374 aa26.48■■□□□ 1.83
LINC00654-202ENST00000589201 IL17REQ8NFR9 667 aa26.48■■□□□ 1.83
LINC00654-202ENST00000589201 MTFR1LQ9H019 292 aa26.48■■□□□ 1.83
LINC00654-202ENST00000589201 QSER1Q2KHR3 1735 aa26.48■■□□□ 1.83
LINC00654-202ENST00000589201 PTCD1O75127 700 aaKnown RBP26.47■■□□□ 1.83
LINC00654-202ENST00000589201 PRKRIP1Q9H875 184 aaPredicted RBP26.47■■□□□ 1.83
LINC00654-202ENST00000589201 ADAMTS7Q9UKP4 1686 aa26.47■■□□□ 1.83
LINC00654-202ENST00000589201 C4BP0C0L5 1744 aa26.46■■□□□ 1.83
LINC00654-202ENST00000589201 PTGER2P43116 358 aa26.46■■□□□ 1.83
LINC00654-202ENST00000589201 COL23A1Q86Y22 540 aaPredicted RBP26.45■■□□□ 1.82
LINC00654-202ENST00000589201 AK7Q96M32 723 aa26.45■■□□□ 1.82
LINC00654-202ENST00000589201 MRC1P22897 1456 aa26.44■■□□□ 1.82
LINC00654-202ENST00000589201 SLC16A10Q8TF71 515 aa26.44■■□□□ 1.82
LINC00654-202ENST00000589201 MSH5O43196 834 aa26.43■■□□□ 1.82
LINC00654-202ENST00000589201 SLC39A6Q13433 755 aa26.43■■□□□ 1.82
LINC00654-202ENST00000589201 AMIGO3Q86WK7 504 aa26.43■■□□□ 1.82
LINC00654-202ENST00000589201 PPP1R1BQ9UD71 204 aaPredicted RBP26.43■■□□□ 1.82
LINC00654-202ENST00000589201 SMIM5Q71RC9 77 aa26.42■■□□□ 1.82
LINC00654-202ENST00000589201 PLEKHF1Q96S99 279 aa26.42■■□□□ 1.82
LINC00654-202ENST00000589201 TEFQ10587 303 aa26.41■■□□□ 1.82
LINC00654-202ENST00000589201 SGIP1Q9BQI5 828 aa26.41■■□□□ 1.82
LINC00654-202ENST00000589201 FLAD1Q8NFF5 587 aa26.4■■□□□ 1.82
LINC00654-202ENST00000589201 ZNF831Q5JPB2 1677 aa26.4■■□□□ 1.82
LINC00654-202ENST00000589201 NEFMP07197 916 aa26.39■■□□□ 1.82
LINC00654-202ENST00000589201 CEMIPQ8WUJ3 1361 aa26.38■■□□□ 1.81
LINC00654-202ENST00000589201 GNPATO15228 680 aa26.38■■□□□ 1.81
LINC00654-202ENST00000589201 PHF14O94880 888 aa26.38■■□□□ 1.81
LINC00654-202ENST00000589201 RTF1Q92541 710 aaKnown RBP26.38■■□□□ 1.81
LINC00654-202ENST00000589201 PNNQ9H307 717 aaKnown RBP26.38■■□□□ 1.81
LINC00654-202ENST00000589201 UBR3Q6ZT12 1888 aa26.37■■□□□ 1.81
LINC00654-202ENST00000589201 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.37■■□□□ 1.81
LINC00654-202ENST00000589201 MCM10Q7L590 875 aa26.37■■□□□ 1.81
LINC00654-202ENST00000589201 DCTN1Q14203 1278 aa26.36■■□□□ 1.81
LINC00654-202ENST00000589201 SSFA2P28290 1259 aa26.35■■□□□ 1.81
LINC00654-202ENST00000589201 RC3H1Q5TC82 1133 aaKnown RBP26.35■■□□□ 1.81
LINC00654-202ENST00000589201 HTATSF1O43719 755 aaKnown RBP26.34■■□□□ 1.81
LINC00654-202ENST00000589201 CNTNAP4Q9C0A0 1308 aa26.34■■□□□ 1.81
LINC00654-202ENST00000589201 COL5A3P25940 1745 aaPredicted RBP26.34■■□□□ 1.81
LINC00654-202ENST00000589201 SIPA1L3O60292 1781 aaPredicted RBP26.33■■□□□ 1.81
LINC00654-202ENST00000589201 NFE2L2Q16236 605 aa26.33■■□□□ 1.81
LINC00654-202ENST00000589201 DNAJC10Q8IXB1 793 aa26.33■■□□□ 1.81
LINC00654-202ENST00000589201 KCPQ6ZWJ8 1503 aa26.33■■□□□ 1.81
LINC00654-202ENST00000589201 MAPK8IP3Q9UPT6 1336 aa26.33■■□□□ 1.81
LINC00654-202ENST00000589201 MSL1Q68DK7 614 aa26.32■■□□□ 1.8
LINC00654-202ENST00000589201 ZNF790Q6PG37 636 aa26.32■■□□□ 1.8
LINC00654-202ENST00000589201 TTC5Q8N0Z6 440 aa26.32■■□□□ 1.8
LINC00654-202ENST00000589201 ARXQ96QS3 562 aa26.32■■□□□ 1.8
LINC00654-202ENST00000589201 RTCBQ9Y3I0 505 aaKnown RBP26.32■■□□□ 1.8
LINC00654-202ENST00000589201 MYH14Q7Z406 1995 aaKnown RBP26.31■■□□□ 1.8
LINC00654-202ENST00000589201 TJP1Q07157 1748 aa26.31■■□□□ 1.8
LINC00654-202ENST00000589201 BTBD11A6QL63 1104 aa26.31■■□□□ 1.8
LINC00654-202ENST00000589201 CRKLP46109 303 aaKnown RBP26.31■■□□□ 1.8
LINC00654-202ENST00000589201 RPS6KA4O75676 772 aa26.3■■□□□ 1.8
LINC00654-202ENST00000589201 POLD1P28340 1107 aa26.3■■□□□ 1.8
LINC00654-202ENST00000589201 WDR43Q15061 677 aaKnown RBP eCLIP26.3■■□□□ 1.8
LINC00654-202ENST00000589201 COL24A1Q17RW2 1714 aa26.3■■□□□ 1.8
LINC00654-202ENST00000589201 DLG5Q8TDM6 1919 aa26.29■■□□□ 1.8
LINC00654-202ENST00000589201 TRAPPC3LQ5T215 181 aa26.29■■□□□ 1.8
LINC00654-202ENST00000589201 VSIG10Q8N0Z9 540 aa26.29■■□□□ 1.8
LINC00654-202ENST00000589201 UBR2Q8IWV8 1755 aa26.28■■□□□ 1.8
LINC00654-202ENST00000589201 KCNQ3O43525 872 aa26.28■■□□□ 1.8
LINC00654-202ENST00000589201 INTS5Q6P9B9 1019 aaKnown RBP26.28■■□□□ 1.8
LINC00654-202ENST00000589201 ZNF496Q96IT1 587 aaPredicted RBP26.28■■□□□ 1.8
LINC00654-202ENST00000589201 ADAMTS8Q9UP79 889 aa26.28■■□□□ 1.8
LINC00654-202ENST00000589201 CICQ96RK0 1608 aaPredicted RBP26.28■■□□□ 1.8
LINC00654-202ENST00000589201 CYP19A1P11511 503 aaPredicted RBP26.27■■□□□ 1.8
LINC00654-202ENST00000589201 CCDC146Q8IYE0 955 aa26.27■■□□□ 1.8
LINC00654-202ENST00000589201 ARHGEF1Q92888 912 aaKnown RBP26.27■■□□□ 1.8
LINC00654-202ENST00000589201 FHDC1Q9C0D6 1143 aaPredicted RBP26.27■■□□□ 1.8
LINC00654-202ENST00000589201 TAF7Q15545 349 aaPredicted RBP26.25■■□□□ 1.79
LINC00654-202ENST00000589201 ADRA2BP18089 450 aa26.24■■□□□ 1.79
LINC00654-202ENST00000589201 FMNL2Q96PY5 1086 aa26.24■■□□□ 1.79
LINC00654-202ENST00000589201 SYT17Q9BSW7 474 aa26.24■■□□□ 1.79
LINC00654-202ENST00000589201 CCDC87Q9NVE4 849 aa26.24■■□□□ 1.79
LINC00654-202ENST00000589201 HEG1Q9ULI3 1381 aa26.23■■□□□ 1.79
LINC00654-202ENST00000589201 TMPOP42166 694 aaKnown RBP26.23■■□□□ 1.79
LINC00654-202ENST00000589201 RIPK4P57078 832 aa26.23■■□□□ 1.79
LINC00654-202ENST00000589201 CCDC184Q52MB2 194 aa26.23■■□□□ 1.79
LINC00654-202ENST00000589201 THUMPD2Q9BTF0 503 aaKnown RBP26.23■■□□□ 1.79
LINC00654-202ENST00000589201 ANP32CO43423 234 aa26.22■■□□□ 1.79
LINC00654-202ENST00000589201 RFC4P35249 363 aa26.22■■□□□ 1.79
LINC00654-202ENST00000589201 RUNDC1Q96C34 613 aa26.22■■□□□ 1.79
LINC00654-202ENST00000589201 MIS18AQ9NYP9 233 aa26.22■■□□□ 1.79
LINC00654-202ENST00000589201 STARD3NLO95772 234 aa26.2■■□□□ 1.78
LINC00654-202ENST00000589201 TEX13AQ9BXU3 409 aaPredicted RBP26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms