RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 TEFQ10587 303 aa26.22■■□□□ 1.79
DNMT1-216ENST00000588952 TMOD3Q9NYL9 352 aa26.22■■□□□ 1.79
DNMT1-216ENST00000588952 KAT6BQ8WYB5 2073 aa26.21■■□□□ 1.79
DNMT1-216ENST00000588952 PAPPAQ13219 1627 aa26.21■■□□□ 1.79
DNMT1-216ENST00000588952 TRIM37O94972 964 aa26.2■■□□□ 1.78
DNMT1-216ENST00000588952 SPINK5Q9NQ38 1064 aaPredicted RBP26.2■■□□□ 1.78
DNMT1-216ENST00000588952 MIS18AQ9NYP9 233 aa26.2■■□□□ 1.78
DNMT1-216ENST00000588952 BTAF1O14981 1849 aa26.2■■□□□ 1.78
DNMT1-216ENST00000588952 ZBED9Q6R2W3 1325 aa26.19■■□□□ 1.78
DNMT1-216ENST00000588952 WDR63Q8IWG1 891 aa26.19■■□□□ 1.78
DNMT1-216ENST00000588952 TAF7Q15545 349 aaPredicted RBP26.18■■□□□ 1.78
DNMT1-216ENST00000588952 TNS1Q9HBL0 1735 aaKnown RBP26.18■■□□□ 1.78
DNMT1-216ENST00000588952 KDM3BQ7LBC6 1761 aa26.18■■□□□ 1.78
DNMT1-216ENST00000588952 ZNF853P0CG23 659 aa26.17■■□□□ 1.78
DNMT1-216ENST00000588952 SLC39A6Q13433 755 aa26.17■■□□□ 1.78
DNMT1-216ENST00000588952 BCL11BQ9C0K0 894 aaPredicted RBP26.17■■□□□ 1.78
DNMT1-216ENST00000588952 IL16Q14005 1332 aa26.16■■□□□ 1.78
DNMT1-216ENST00000588952 KCNQ3O43525 872 aa26.16■■□□□ 1.78
DNMT1-216ENST00000588952 ASAP1Q9ULH1 1129 aa26.16■■□□□ 1.78
DNMT1-216ENST00000588952 LAS1LQ9Y4W2 734 aaKnown RBP26.16■■□□□ 1.78
DNMT1-216ENST00000588952 BTBD11A6QL63 1104 aa26.15■■□□□ 1.78
DNMT1-216ENST00000588952 CHL1O00533 1208 aa26.15■■□□□ 1.78
DNMT1-216ENST00000588952 CALD1Q05682 793 aaKnown RBP26.15■■□□□ 1.78
DNMT1-216ENST00000588952 CDCA7LQ96GN5 454 aa26.15■■□□□ 1.78
DNMT1-216ENST00000588952 ATG3Q9NT62 314 aa26.15■■□□□ 1.78
DNMT1-216ENST00000588952 IFT57Q9NWB7 429 aa26.15■■□□□ 1.78
DNMT1-216ENST00000588952 CFAP44Q96MT7 982 aa26.14■■□□□ 1.78
DNMT1-216ENST00000588952 KCPQ6ZWJ8 1503 aa26.13■■□□□ 1.77
DNMT1-216ENST00000588952 GOLGA2Q08379 1002 aa26.12■■□□□ 1.77
DNMT1-216ENST00000588952 MBIPQ9NS73 344 aa26.12■■□□□ 1.77
DNMT1-216ENST00000588952 TSPYL4Q9UJ04 414 aa26.12■■□□□ 1.77
DNMT1-216ENST00000588952 UBR2Q8IWV8 1755 aa26.12■■□□□ 1.77
DNMT1-216ENST00000588952 GNAI1P63096 354 aa26.11■■□□□ 1.77
DNMT1-216ENST00000588952 TSR2Q969E8 191 aaKnown RBP26.11■■□□□ 1.77
DNMT1-216ENST00000588952 ZNF790Q6PG37 636 aa26.1■■□□□ 1.77
DNMT1-216ENST00000588952 SLFN5Q08AF3 891 aa26.09■■□□□ 1.77
DNMT1-216ENST00000588952 BABAM1Q9NWV8 329 aa26.09■■□□□ 1.77
DNMT1-216ENST00000588952 FANCIQ9NVI1 1328 aa26.09■■□□□ 1.77
DNMT1-216ENST00000588952 PALLDQ8WX93 1383 aa26.08■■□□□ 1.77
DNMT1-216ENST00000588952 E9PSI1 815 aa26.06■■□□□ 1.76
DNMT1-216ENST00000588952 TRMT2AQ8IZ69 625 aaKnown RBP26.06■■□□□ 1.76
DNMT1-216ENST00000588952 ZNF496Q96IT1 587 aaPredicted RBP26.06■■□□□ 1.76
DNMT1-216ENST00000588952 LY75O60449 1722 aa26.05■■□□□ 1.76
DNMT1-216ENST00000588952 PTCD1O75127 700 aaKnown RBP26.05■■□□□ 1.76
DNMT1-216ENST00000588952 APBA3O96018 575 aa26.05■■□□□ 1.76
DNMT1-216ENST00000588952 EIF4A1P60842 406 aaKnown RBP26.05■■□□□ 1.76
DNMT1-216ENST00000588952 KRT24Q2M2I5 525 aa26.05■■□□□ 1.76
DNMT1-216ENST00000588952 TTC5Q8N0Z6 440 aa26.05■■□□□ 1.76
DNMT1-216ENST00000588952 SLC4A9Q96Q91 983 aa26.05■■□□□ 1.76
DNMT1-216ENST00000588952 SMARCC1Q92922 1105 aaPredicted RBP26.04■■□□□ 1.76
DNMT1-216ENST00000588952 DUSP27Q5VZP5 1158 aa26.03■■□□□ 1.76
DNMT1-216ENST00000588952 MYH16Q9H6N6 1097 aa26.03■■□□□ 1.76
DNMT1-216ENST00000588952 HEG1Q9ULI3 1381 aa26.03■■□□□ 1.76
DNMT1-216ENST00000588952 C5P01031 1676 aa26.02■■□□□ 1.76
DNMT1-216ENST00000588952 TJP1Q07157 1748 aa26.01■■□□□ 1.75
DNMT1-216ENST00000588952 UPF1Q92900 1129 aaKnown RBP eCLIP26.01■■□□□ 1.759e-6■■■■□ 19.8
DNMT1-216ENST00000588952 RBM42Q9BTD8 480 aaKnown RBP26.01■■□□□ 1.75
DNMT1-216ENST00000588952 LOC102724428A0A0B4J2F2 783 aa26■■□□□ 1.75
DNMT1-216ENST00000588952 PRAMEF22A3QJZ6 481 aa26■■□□□ 1.75
DNMT1-216ENST00000588952 SIK1P57059 783 aa26■■□□□ 1.75
DNMT1-216ENST00000588952 C8orf58Q8NAV2 365 aa26■■□□□ 1.75
DNMT1-216ENST00000588952 FMNL2Q96PY5 1086 aa26■■□□□ 1.75
DNMT1-216ENST00000588952 RGPD3A6NKT7 1758 aaPredicted RBP26■■□□□ 1.75
DNMT1-216ENST00000588952 RGPD4Q7Z3J3 1758 aa26■■□□□ 1.75
DNMT1-216ENST00000588952 KCNQ4P56696 695 aa25.99■■□□□ 1.75
DNMT1-216ENST00000588952 PLSCR1O15162 318 aa25.98■■□□□ 1.75
DNMT1-216ENST00000588952 EXOSC9Q06265 439 aaKnown RBP25.98■■□□□ 1.75
DNMT1-216ENST00000588952 PROM2Q8N271 834 aa25.98■■□□□ 1.75
DNMT1-216ENST00000588952 TSPYL6Q8N831 410 aa25.98■■□□□ 1.75
DNMT1-216ENST00000588952 CICQ96RK0 1608 aaPredicted RBP25.98■■□□□ 1.75
DNMT1-216ENST00000588952 EN1Q05925 392 aaPredicted RBP25.97■■□□□ 1.75
DNMT1-216ENST00000588952 ITPK1Q13572 414 aa25.97■■□□□ 1.75
DNMT1-216ENST00000588952 DEFB132Q7Z7B7 95 aa25.97■■□□□ 1.75
DNMT1-216ENST00000588952 ZNF831Q5JPB2 1677 aa25.96■■□□□ 1.75
DNMT1-216ENST00000588952 GIGYF1O75420 1035 aaPredicted RBP25.96■■□□□ 1.75
DNMT1-216ENST00000588952 SF3B2Q13435 895 aaKnown RBP25.96■■□□□ 1.75
DNMT1-216ENST00000588952 LRRC4BQ9NT99 713 aa25.96■■□□□ 1.75
DNMT1-216ENST00000588952 ELL2O00472 640 aaPredicted RBP25.95■■□□□ 1.74
DNMT1-216ENST00000588952 CCDC125Q86Z20 511 aa25.95■■□□□ 1.74
DNMT1-216ENST00000588952 DNAJC10Q8IXB1 793 aa25.95■■□□□ 1.74
DNMT1-216ENST00000588952 CAMKK2Q96RR4 588 aa25.95■■□□□ 1.74
DNMT1-216ENST00000588952 ATP6V1AP38606 617 aa25.94■■□□□ 1.74
DNMT1-216ENST00000588952 EZH2Q15910 746 aaKnown RBP25.94■■□□□ 1.74
DNMT1-216ENST00000588952 TXNRD1Q16881 649 aa25.94■■□□□ 1.74
DNMT1-216ENST00000588952 VSIG10Q8N0Z9 540 aa25.94■■□□□ 1.74
DNMT1-216ENST00000588952 CCNL1Q9UK58 526 aaPredicted RBP25.94■■□□□ 1.74
DNMT1-216ENST00000588952 LAMB4A4D0S4 1761 aa25.93■■□□□ 1.74
DNMT1-216ENST00000588952 SNRPA1P09661 255 aaKnown RBP25.93■■□□□ 1.74
DNMT1-216ENST00000588952 COL5A3P25940 1745 aaPredicted RBP25.93■■□□□ 1.74
DNMT1-216ENST00000588952 BAG6P46379 1132 aa25.92■■□□□ 1.74
DNMT1-216ENST00000588952 USP16Q9Y5T5 823 aa25.92■■□□□ 1.74
DNMT1-216ENST00000588952 RREB1Q92766 1687 aa25.92■■□□□ 1.74
DNMT1-216ENST00000588952 TAF1LQ8IZX4 1826 aa25.91■■□□□ 1.74
DNMT1-216ENST00000588952 LINC00116Q8NCU8 138 aa25.91■■□□□ 1.74
DNMT1-216ENST00000588952 TWISTNBQ3B726 338 aaPredicted RBP25.9■■□□□ 1.74
DNMT1-216ENST00000588952 SLC27A3Q5K4L6 730 aa25.89■■□□□ 1.74
DNMT1-216ENST00000588952 VAMP4O75379 141 aa25.88■■□□□ 1.73
DNMT1-216ENST00000588952 CYP19A1P11511 503 aaPredicted RBP25.88■■□□□ 1.73
DNMT1-216ENST00000588952 HOXB7P09629 217 aa25.87■■□□□ 1.73
DNMT1-216ENST00000588952 NECTIN2Q92692 538 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms