RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 TAF1LQ8IZX4 1826 aa23.31■■□□□ 1.32
DNMT1-215ENST00000588913 NFATC2IPQ8NCF5 419 aa23.3■■□□□ 1.32
DNMT1-215ENST00000588913 TUBGCP6Q96RT7 1819 aa23.3■■□□□ 1.32
DNMT1-215ENST00000588913 C5P01031 1676 aa23.28■■□□□ 1.32
DNMT1-215ENST00000588913 CABP4P57796 275 aa23.28■■□□□ 1.32
DNMT1-215ENST00000588913 ZNF827Q17R98 1081 aa23.28■■□□□ 1.32
DNMT1-215ENST00000588913 GAS2L2Q8NHY3 880 aa23.28■■□□□ 1.32
DNMT1-215ENST00000588913 ADAMTS8Q9UP79 889 aa23.28■■□□□ 1.32
DNMT1-215ENST00000588913 ANP32CO43423 234 aa23.27■■□□□ 1.32
DNMT1-215ENST00000588913 CCDC146Q8IYE0 955 aa23.27■■□□□ 1.32
DNMT1-215ENST00000588913 SLC4A9Q96Q91 983 aa23.27■■□□□ 1.32
DNMT1-215ENST00000588913 PDGFDQ9GZP0 370 aaPredicted RBP23.27■■□□□ 1.32
DNMT1-215ENST00000588913 DCTN1Q14203 1278 aa23.27■■□□□ 1.32
DNMT1-215ENST00000588913 GNAT3A8MTJ3 354 aa23.26■■□□□ 1.31
DNMT1-215ENST00000588913 SLC52A2Q9HAB3 445 aa23.26■■□□□ 1.31
DNMT1-215ENST00000588913 CCNL1Q9UK58 526 aaPredicted RBP23.25■■□□□ 1.31
DNMT1-215ENST00000588913 CEMIPQ8WUJ3 1361 aa23.25■■□□□ 1.31
DNMT1-215ENST00000588913 CASZ1Q86V15 1759 aa23.24■■□□□ 1.31
DNMT1-215ENST00000588913 MCM10Q7L590 875 aa23.24■■□□□ 1.31
DNMT1-215ENST00000588913 SLC39A6Q13433 755 aa23.23■■□□□ 1.31
DNMT1-215ENST00000588913 ITPK1Q13572 414 aa23.23■■□□□ 1.31
DNMT1-215ENST00000588913 SLC27A3Q5K4L6 730 aa23.22■■□□□ 1.31
DNMT1-215ENST00000588913 TJP1Q07157 1748 aa23.22■■□□□ 1.31
DNMT1-215ENST00000588913 KCPQ6ZWJ8 1503 aa23.22■■□□□ 1.31
DNMT1-215ENST00000588913 AKT1S1Q96B36 256 aa23.22■■□□□ 1.31
DNMT1-215ENST00000588913 UBR2Q8IWV8 1755 aa23.21■■□□□ 1.31
DNMT1-215ENST00000588913 LOC102724428A0A0B4J2F2 783 aa23.21■■□□□ 1.31
DNMT1-215ENST00000588913 SIK1P57059 783 aa23.21■■□□□ 1.31
DNMT1-215ENST00000588913 NFE2L2Q16236 605 aa23.21■■□□□ 1.31
DNMT1-215ENST00000588913 SLC15A2Q16348 729 aa23.21■■□□□ 1.31
DNMT1-215ENST00000588913 AMIGO3Q86WK7 504 aa23.21■■□□□ 1.31
DNMT1-215ENST00000588913 C4BP0C0L5 1744 aa23.21■■□□□ 1.31
DNMT1-215ENST00000588913 COL5A3P25940 1745 aaPredicted RBP23.2■■□□□ 1.3
DNMT1-215ENST00000588913 WDR43Q15061 677 aaKnown RBP eCLIP23.2■■□□□ 1.3
DNMT1-215ENST00000588913 SMARCC1Q92922 1105 aaPredicted RBP23.2■■□□□ 1.3
DNMT1-215ENST00000588913 THUMPD2Q9BTF0 503 aaKnown RBP23.2■■□□□ 1.3
DNMT1-215ENST00000588913 NBPF14Q5TI25 921 aa23.19■■□□□ 1.3
DNMT1-215ENST00000588913 SMIM5Q71RC9 77 aa23.19■■□□□ 1.3
DNMT1-215ENST00000588913 LINC00116Q8NCU8 138 aa23.19■■□□□ 1.3
DNMT1-215ENST00000588913 RRP7AQ9Y3A4 280 aaKnown RBP23.19■■□□□ 1.3
DNMT1-215ENST00000588913 ZNF831Q5JPB2 1677 aa23.19■■□□□ 1.3
DNMT1-215ENST00000588913 KCNQ3O43525 872 aa23.17■■□□□ 1.3
DNMT1-215ENST00000588913 PTCD1O75127 700 aaKnown RBP23.17■■□□□ 1.3
DNMT1-215ENST00000588913 PNISRQ8TF01 805 aaKnown RBP23.17■■□□□ 1.3
DNMT1-215ENST00000588913 MRS2Q9HD23 443 aa23.17■■□□□ 1.3
DNMT1-215ENST00000588913 QSER1Q2KHR3 1735 aa23.17■■□□□ 1.3
DNMT1-215ENST00000588913 MAPK8IP3Q9UPT6 1336 aa23.17■■□□□ 1.3
DNMT1-215ENST00000588913 SENP3-EIF4A1A0A087X0R7 540 aa23.17■■□□□ 1.3
DNMT1-215ENST00000588913 RBM42Q9BTD8 480 aaKnown RBP23.17■■□□□ 1.3
DNMT1-215ENST00000588913 STK32BQ9NY57 414 aa23.17■■□□□ 1.3
DNMT1-215ENST00000588913 MYH14Q7Z406 1995 aaKnown RBP23.16■■□□□ 1.3
DNMT1-215ENST00000588913 UBR3Q6ZT12 1888 aa23.16■■□□□ 1.3
DNMT1-215ENST00000588913 CICQ96RK0 1608 aaPredicted RBP23.15■■□□□ 1.3
DNMT1-215ENST00000588913 ATP6V1AP38606 617 aa23.15■■□□□ 1.3
DNMT1-215ENST00000588913 TMPOP42166 694 aaKnown RBP23.15■■□□□ 1.3
DNMT1-215ENST00000588913 RUNDC1Q96C34 613 aa23.14■■□□□ 1.3
DNMT1-215ENST00000588913 NEFLP07196 543 aa23.14■■□□□ 1.29
DNMT1-215ENST00000588913 TEFQ10587 303 aa23.14■■□□□ 1.29
DNMT1-215ENST00000588913 PNPLA7Q6ZV29 1317 aa23.13■■□□□ 1.29
DNMT1-215ENST00000588913 RIPK4P57078 832 aa23.12■■□□□ 1.29
DNMT1-215ENST00000588913 NEUROD2Q15784 382 aa23.12■■□□□ 1.29
DNMT1-215ENST00000588913 MIS18AQ9NYP9 233 aa23.12■■□□□ 1.29
DNMT1-215ENST00000588913 KDM3BQ7LBC6 1761 aa23.12■■□□□ 1.29
DNMT1-215ENST00000588913 HTATSF1O43719 755 aaKnown RBP23.12■■□□□ 1.29
DNMT1-215ENST00000588913 RTF1Q92541 710 aaKnown RBP23.12■■□□□ 1.29
DNMT1-215ENST00000588913 PNNQ9H307 717 aaKnown RBP23.12■■□□□ 1.29
DNMT1-215ENST00000588913 TRIM35Q9UPQ4 493 aa23.11■■□□□ 1.29
DNMT1-215ENST00000588913 NEFMP07197 916 aa23.1■■□□□ 1.29
DNMT1-215ENST00000588913 APAF1O14727 1248 aa23.09■■□□□ 1.29
DNMT1-215ENST00000588913 DNAJC10Q8IXB1 793 aa23.09■■□□□ 1.29
DNMT1-215ENST00000588913 ZNF496Q96IT1 587 aaPredicted RBP23.09■■□□□ 1.29
DNMT1-215ENST00000588913 ZNF790Q6PG37 636 aa23.09■■□□□ 1.29
DNMT1-215ENST00000588913 BTBD11A6QL63 1104 aa23.08■■□□□ 1.29
DNMT1-215ENST00000588913 TFCP2L1Q9NZI6 479 aa23.08■■□□□ 1.29
DNMT1-215ENST00000588913 ZBTB7AO95365 584 aa23.07■■□□□ 1.28
DNMT1-215ENST00000588913 COL23A1Q86Y22 540 aaPredicted RBP23.07■■□□□ 1.28
DNMT1-215ENST00000588913 LRP5O75197 1615 aa23.07■■□□□ 1.28
DNMT1-215ENST00000588913 PRAMEF22A3QJZ6 481 aa23.06■■□□□ 1.28
DNMT1-215ENST00000588913 HEG1Q9ULI3 1381 aa23.04■■□□□ 1.28
DNMT1-215ENST00000588913 TAF7Q15545 349 aaPredicted RBP23.04■■□□□ 1.28
DNMT1-215ENST00000588913 C4AP0C0L4 1744 aa23.03■■□□□ 1.28
DNMT1-215ENST00000588913 COL24A1Q17RW2 1714 aa23.03■■□□□ 1.28
DNMT1-215ENST00000588913 GNPATO15228 680 aa23.03■■□□□ 1.28
DNMT1-215ENST00000588913 PHF14O94880 888 aa23.03■■□□□ 1.28
DNMT1-215ENST00000588913 INTS5Q6P9B9 1019 aaKnown RBP23.03■■□□□ 1.28
DNMT1-215ENST00000588913 AK7Q96M32 723 aa23.03■■□□□ 1.28
DNMT1-215ENST00000588913 CRKLP46109 303 aaKnown RBP23.02■■□□□ 1.28
DNMT1-215ENST00000588913 FAM9BQ8IZU0 186 aa23.02■■□□□ 1.28
DNMT1-215ENST00000588913 TTC5Q8N0Z6 440 aa23.02■■□□□ 1.28
DNMT1-215ENST00000588913 TSHZ2Q9NRE2 1034 aa23.02■■□□□ 1.28
DNMT1-215ENST00000588913 ATF5Q9Y2D1 282 aaPredicted RBP23.02■■□□□ 1.28
DNMT1-215ENST00000588913 CNTNAP4Q9C0A0 1308 aa23.02■■□□□ 1.28
DNMT1-215ENST00000588913 CYP19A1P11511 503 aaPredicted RBP23.01■■□□□ 1.27
DNMT1-215ENST00000588913 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.01■■□□□ 1.27
DNMT1-215ENST00000588913 PTGER2P43116 358 aa22.99■■□□□ 1.27
DNMT1-215ENST00000588913 RC3H1Q5TC82 1133 aaKnown RBP22.99■■□□□ 1.27
DNMT1-215ENST00000588913 VSIG10Q8N0Z9 540 aa22.99■■□□□ 1.27
DNMT1-215ENST00000588913 FMNL2Q96PY5 1086 aa22.99■■□□□ 1.27
DNMT1-215ENST00000588913 SGIP1Q9BQI5 828 aa22.99■■□□□ 1.27
DNMT1-215ENST00000588913 ZBTB1Q9Y2K1 713 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms