RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 SOS2Q07890 1332 aaPredicted RBP9.26□□□□□ -0.93
ZNF554-202ENST00000588534 GCC1Q96CN9 775 aa9.26□□□□□ -0.93
ZNF554-202ENST00000588534 SPATA31A6Q5VVP1 1343 aa9.26□□□□□ -0.93
ZNF554-202ENST00000588534 BCAR3O75815 825 aa9.26□□□□□ -0.93
ZNF554-202ENST00000588534 PANK1Q8TE04 598 aa9.26□□□□□ -0.93
ZNF554-202ENST00000588534 ZNF772Q68DY9 489 aaPredicted RBP9.26□□□□□ -0.93
ZNF554-202ENST00000588534 CHL1O00533 1208 aa9.25□□□□□ -0.93
ZNF554-202ENST00000588534 PTCD1O75127 700 aaKnown RBP9.25□□□□□ -0.93
ZNF554-202ENST00000588534 KIAA1211Q6ZU35 1233 aa9.25□□□□□ -0.93
ZNF554-202ENST00000588534 USP19O94966 1318 aa9.25□□□□□ -0.93
ZNF554-202ENST00000588534 FAM83GA6ND36 823 aa9.25□□□□□ -0.93
ZNF554-202ENST00000588534 OVOS2A0A0J9YW53 1432 aa9.25□□□□□ -0.93
ZNF554-202ENST00000588534 OVOS2Q6IE36 1432 aa9.25□□□□□ -0.93
ZNF554-202ENST00000588534 ARHGEF28Q8N1W1 1705 aaKnown RBP9.24□□□□□ -0.93
ZNF554-202ENST00000588534 MIS18AQ9NYP9 233 aa9.24□□□□□ -0.93
ZNF554-202ENST00000588534 MST1RQ04912 1400 aa9.24□□□□□ -0.93
ZNF554-202ENST00000588534 USP32Q8NFA0 1604 aa9.24□□□□□ -0.93
ZNF554-202ENST00000588534 FLIIQ13045 1269 aa9.24□□□□□ -0.93
ZNF554-202ENST00000588534 ANKRD45Q5TZF3 282 aa9.24□□□□□ -0.93
ZNF554-202ENST00000588534 PLEKHF1Q96S99 279 aa9.24□□□□□ -0.93
ZNF554-202ENST00000588534 SLC52A2Q9HAB3 445 aa9.24□□□□□ -0.93
ZNF554-202ENST00000588534 APBB1O00213 710 aa9.23□□□□□ -0.93
ZNF554-202ENST00000588534 MYL6BP14649 208 aa9.23□□□□□ -0.93
ZNF554-202ENST00000588534 DNAAF4Q8WXU2 420 aa9.23□□□□□ -0.93
ZNF554-202ENST00000588534 IFT172Q9UG01 1749 aa9.23□□□□□ -0.93
ZNF554-202ENST00000588534 UNC5CLQ8IV45 518 aa9.23□□□□□ -0.93
ZNF554-202ENST00000588534 TRIM35Q9UPQ4 493 aa9.23□□□□□ -0.93
ZNF554-202ENST00000588534 ERC2O15083 957 aa9.23□□□□□ -0.93
ZNF554-202ENST00000588534 PHKG2P15735 406 aa9.23□□□□□ -0.93
ZNF554-202ENST00000588534 KCNJ4P48050 445 aa9.23□□□□□ -0.93
ZNF554-202ENST00000588534 RTL5Q5HYW3 569 aaPredicted RBP9.23□□□□□ -0.93
ZNF554-202ENST00000588534 IFIT2P09913 472 aaKnown RBP9.22□□□□□ -0.93
ZNF554-202ENST00000588534 NFATC2IPQ8NCF5 419 aa9.22□□□□□ -0.93
ZNF554-202ENST00000588534 NCAPD2Q15021 1401 aa9.22□□□□□ -0.93
ZNF554-202ENST00000588534 ZPR1O75312 459 aa9.22□□□□□ -0.93
ZNF554-202ENST00000588534 VAMP4O75379 141 aa9.22□□□□□ -0.93
ZNF554-202ENST00000588534 ALDH1L1O75891 902 aa9.22□□□□□ -0.93
ZNF554-202ENST00000588534 ZNF790Q6PG37 636 aa9.22□□□□□ -0.93
ZNF554-202ENST00000588534 ERBB4Q15303 1308 aa9.22□□□□□ -0.93
ZNF554-202ENST00000588534 G3V3G9 751 aa9.21□□□□□ -0.93
ZNF554-202ENST00000588534 DCAF8Q5TAQ9 597 aa9.21□□□□□ -0.93
ZNF554-202ENST00000588534 CLASRPQ8N2M8 674 aaKnown RBP9.21□□□□□ -0.93
ZNF554-202ENST00000588534 ADGRB2O60241 1585 aa9.21□□□□□ -0.93
ZNF554-202ENST00000588534 CPDO75976 1380 aa9.21□□□□□ -0.93
ZNF554-202ENST00000588534 ITSN1Q15811 1721 aa9.21□□□□□ -0.94
ZNF554-202ENST00000588534 RUFY2Q8WXA3 655 aa9.21□□□□□ -0.94
ZNF554-202ENST00000588534 DDX21Q9NR30 783 aaKnown RBP eCLIP9.21□□□□□ -0.94
ZNF554-202ENST00000588534 KNDC1Q76NI1 1749 aa9.2□□□□□ -0.94
ZNF554-202ENST00000588534 ANKRD13DQ6ZTN6 518 aa9.2□□□□□ -0.94
ZNF554-202ENST00000588534 AK7Q96M32 723 aa9.2□□□□□ -0.94
ZNF554-202ENST00000588534 ZNF142P52746 1687 aaPredicted RBP9.2□□□□□ -0.94
ZNF554-202ENST00000588534 KSR2Q6VAB6 950 aa9.2□□□□□ -0.94
ZNF554-202ENST00000588534 TMEM57Q8N5G2 664 aa9.2□□□□□ -0.94
ZNF554-202ENST00000588534 MRPL50Q8N5N7 158 aaKnown RBP9.2□□□□□ -0.94
ZNF554-202ENST00000588534 TRIM6-TRIM34B2RNG4 842 aa9.19□□□□□ -0.94
ZNF554-202ENST00000588534 C8orf58Q8NAV2 365 aa9.19□□□□□ -0.94
ZNF554-202ENST00000588534 LRRC7Q96NW7 1537 aa9.19□□□□□ -0.94
ZNF554-202ENST00000588534 RAB11FIP3O75154 756 aa9.19□□□□□ -0.94
ZNF554-202ENST00000588534 FRAT2O75474 233 aaPredicted RBP9.19□□□□□ -0.94
ZNF554-202ENST00000588534 SURF6O75683 361 aaKnown RBP9.19□□□□□ -0.94
ZNF554-202ENST00000588534 CCDC57Q2TAC2 916 aa9.19□□□□□ -0.94
ZNF554-202ENST00000588534 TRIM27P14373 513 aa9.19□□□□□ -0.94
ZNF554-202ENST00000588534 ATP6V1AP38606 617 aa9.19□□□□□ -0.94
ZNF554-202ENST00000588534 FAM98CQ17RN3 349 aaKnown RBP9.19□□□□□ -0.94
ZNF554-202ENST00000588534 PPP1R42Q7Z4L9 355 aa9.18□□□□□ -0.94
ZNF554-202ENST00000588534 PLEKHG2Q9H7P9 1386 aa9.18□□□□□ -0.94
ZNF554-202ENST00000588534 KIF1AQ12756 1690 aa9.18□□□□□ -0.94
ZNF554-202ENST00000588534 MYO5BQ9ULV0 1848 aa9.18□□□□□ -0.94
ZNF554-202ENST00000588534 IL17REQ8NFR9 667 aa9.18□□□□□ -0.94
ZNF554-202ENST00000588534 QTRT2Q9H974 415 aaKnown RBP9.18□□□□□ -0.94
ZNF554-202ENST00000588534 CWC25Q9NXE8 425 aaPredicted RBP9.18□□□□□ -0.94
ZNF554-202ENST00000588534 LINS1Q8NG48 757 aa9.17□□□□□ -0.94
ZNF554-202ENST00000588534 CRB1P82279 1406 aa9.17□□□□□ -0.94
ZNF554-202ENST00000588534 SLC39A6Q13433 755 aa9.17□□□□□ -0.94
ZNF554-202ENST00000588534 CHMP4CQ96CF2 233 aa9.17□□□□□ -0.94
ZNF554-202ENST00000588534 MYD88Q99836 296 aa9.17□□□□□ -0.94
ZNF554-202ENST00000588534 EIF4A1P60842 406 aaKnown RBP9.17□□□□□ -0.94
ZNF554-202ENST00000588534 LGR6Q9HBX8 967 aa9.17□□□□□ -0.94
ZNF554-202ENST00000588534 RNF123Q5XPI4 1314 aa9.17□□□□□ -0.94
ZNF554-202ENST00000588534 PI4KAP2A4QPH2 592 aa9.16□□□□□ -0.94
ZNF554-202ENST00000588534 FAM161AQ3B820 660 aa9.16□□□□□ -0.94
ZNF554-202ENST00000588534 FAM196AQ6ZSG2 479 aa9.16□□□□□ -0.94
ZNF554-202ENST00000588534 VPS37DQ86XT2 251 aa9.16□□□□□ -0.94
ZNF554-202ENST00000588534 PI4KAP1Q8N8J0 262 aa9.16□□□□□ -0.94
ZNF554-202ENST00000588534 CHPF2Q9P2E5 772 aa9.16□□□□□ -0.94
ZNF554-202ENST00000588534 MAP3K2Q9Y2U5 619 aa9.16□□□□□ -0.94
ZNF554-202ENST00000588534 ZNF521Q96K83 1311 aa9.16□□□□□ -0.94
ZNF554-202ENST00000588534 HIP1O00291 1037 aa9.16□□□□□ -0.94
ZNF554-202ENST00000588534 TRMT2AQ8IZ69 625 aaKnown RBP9.16□□□□□ -0.94
ZNF554-202ENST00000588534 LRRCC1Q9C099 1032 aa9.16□□□□□ -0.94
ZNF554-202ENST00000588534 SRGAP3O43295 1099 aa9.16□□□□□ -0.94
ZNF554-202ENST00000588534 REC8O95072 547 aa9.16□□□□□ -0.94
ZNF554-202ENST00000588534 RFC4P35249 363 aa9.16□□□□□ -0.94
ZNF554-202ENST00000588534 FGD1P98174 961 aa9.16□□□□□ -0.94
ZNF554-202ENST00000588534 ACSBG1Q96GR2 724 aa9.16□□□□□ -0.94
ZNF554-202ENST00000588534 GNL3LQ9NVN8 582 aaKnown RBP9.16□□□□□ -0.94
ZNF554-202ENST00000588534 KDRP35968 1356 aa9.16□□□□□ -0.94
ZNF554-202ENST00000588534 PRIM1P49642 420 aaKnown RBP9.15□□□□□ -0.94
ZNF554-202ENST00000588534 BRPF1P55201 1214 aaPredicted RBP9.15□□□□□ -0.94
ZNF554-202ENST00000588534 VPS72Q15906 364 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms