RNA–Protein interactions for RNA: ENST00000588269.1

PRKCSH-207, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-207ENST00000588269 PALLDQ8WX93 1383 aa15.75■□□□□ 0.11
PRKCSH-207ENST00000588269 COL3A1P02461 1466 aaPredicted RBP15.74■□□□□ 0.11
PRKCSH-207ENST00000588269 C1QTNF8P60827 252 aa15.74■□□□□ 0.11
PRKCSH-207ENST00000588269 C5P01031 1676 aa15.73■□□□□ 0.11
PRKCSH-207ENST00000588269 U2SURPO15042 1029 aaKnown RBP15.73■□□□□ 0.11
PRKCSH-207ENST00000588269 AMIGO3Q86WK7 504 aa15.73■□□□□ 0.11
PRKCSH-207ENST00000588269 AEBP1Q8IUX7 1158 aa15.73■□□□□ 0.11
PRKCSH-207ENST00000588269 WWC3Q9ULE0 1092 aa15.73■□□□□ 0.11
PRKCSH-207ENST00000588269 TAF1LQ8IZX4 1826 aa15.72■□□□□ 0.11
PRKCSH-207ENST00000588269 ITGB4P16144 1822 aa15.71■□□□□ 0.11
PRKCSH-207ENST00000588269 ERVV-2B6SEH9 535 aa15.71■□□□□ 0.11
PRKCSH-207ENST00000588269 HMOX1P09601 288 aa15.7■□□□□ 0.1
PRKCSH-207ENST00000588269 PPP2R1AP30153 589 aa15.7■□□□□ 0.1
PRKCSH-207ENST00000588269 AKAP4Q5JQC9 854 aa15.7■□□□□ 0.1
PRKCSH-207ENST00000588269 CABP4P57796 275 aa15.69■□□□□ 0.1
PRKCSH-207ENST00000588269 PIGBQ92521 554 aa15.69■□□□□ 0.1
PRKCSH-207ENST00000588269 PHF14O94880 888 aa15.68■□□□□ 0.1
PRKCSH-207ENST00000588269 NEFMP07197 916 aa15.68■□□□□ 0.1
PRKCSH-207ENST00000588269 RALBP1Q15311 655 aa15.68■□□□□ 0.1
PRKCSH-207ENST00000588269 GAS2L2Q8NHY3 880 aa15.68■□□□□ 0.1
PRKCSH-207ENST00000588269 KDM6AO15550 1401 aaPredicted RBP15.68■□□□□ 0.1
PRKCSH-207ENST00000588269 GIGYF1O75420 1035 aaPredicted RBP15.67■□□□□ 0.1
PRKCSH-207ENST00000588269 C4BP0C0L5 1744 aa15.67■□□□□ 0.1
PRKCSH-207ENST00000588269 FLAD1Q8NFF5 587 aa15.66■□□□□ 0.1
PRKCSH-207ENST00000588269 AK7Q96M32 723 aa15.66■□□□□ 0.1
PRKCSH-207ENST00000588269 LOC102724428A0A0B4J2F2 783 aa15.65■□□□□ 0.1
PRKCSH-207ENST00000588269 U2AF1L5P0DN76 240 aaPredicted RBP15.65■□□□□ 0.1
PRKCSH-207ENST00000588269 SIK1P57059 783 aa15.65■□□□□ 0.1
PRKCSH-207ENST00000588269 U2AF1Q01081 240 aaKnown RBP eCLIP15.65■□□□□ 0.1
PRKCSH-207ENST00000588269 UBR3Q6ZT12 1888 aa15.65■□□□□ 0.1
PRKCSH-207ENST00000588269 MRC1P22897 1456 aa15.65■□□□□ 0.1
PRKCSH-207ENST00000588269 DDX10Q13206 875 aaKnown RBP15.64■□□□□ 0.09
PRKCSH-207ENST00000588269 GOLGB1Q14789 3259 aaKnown RBP15.63■□□□□ 0.09
PRKCSH-207ENST00000588269 LINC00116Q8NCU8 138 aa15.63■□□□□ 0.09
PRKCSH-207ENST00000588269 PNNQ9H307 717 aaKnown RBP15.63■□□□□ 0.09
PRKCSH-207ENST00000588269 SCN11AQ9UI33 1791 aa15.62■□□□□ 0.09
PRKCSH-207ENST00000588269 ATP10DQ9P241 1426 aa15.62■□□□□ 0.09
PRKCSH-207ENST00000588269 PRKAR2BP31323 418 aa15.62■□□□□ 0.09
PRKCSH-207ENST00000588269 ZNF526Q8TF50 670 aaPredicted RBP15.62■□□□□ 0.09
PRKCSH-207ENST00000588269 ASAP1Q9ULH1 1129 aa15.62■□□□□ 0.09
PRKCSH-207ENST00000588269 ZNF831Q5JPB2 1677 aa15.62■□□□□ 0.09
PRKCSH-207ENST00000588269 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.61■□□□□ 0.09
PRKCSH-207ENST00000588269 FCHSD2O94868 740 aa15.61■□□□□ 0.09
PRKCSH-207ENST00000588269 ATP6V1AP38606 617 aa15.61■□□□□ 0.09
PRKCSH-207ENST00000588269 MTHFSDQ2M296 383 aaKnown RBP15.61■□□□□ 0.09
PRKCSH-207ENST00000588269 SLC52A2Q9HAB3 445 aa15.61■□□□□ 0.09
PRKCSH-207ENST00000588269 ATG3Q9NT62 314 aa15.61■□□□□ 0.09
PRKCSH-207ENST00000588269 MYBBP1AQ9BQG0 1328 aaKnown RBP15.61■□□□□ 0.09
PRKCSH-207ENST00000588269 GNAT3A8MTJ3 354 aa15.6■□□□□ 0.09
PRKCSH-207ENST00000588269 ITPK1Q13572 414 aa15.6■□□□□ 0.09
PRKCSH-207ENST00000588269 RBM42Q9BTD8 480 aaKnown RBP15.6■□□□□ 0.09
PRKCSH-207ENST00000588269 RSPH6AQ9H0K4 717 aa15.6■□□□□ 0.09
PRKCSH-207ENST00000588269 RNMTO43148 476 aaKnown RBP15.59■□□□□ 0.09
PRKCSH-207ENST00000588269 GRIN3BO60391 1043 aa15.59■□□□□ 0.09
PRKCSH-207ENST00000588269 SSFA2P28290 1259 aa15.59■□□□□ 0.09
PRKCSH-207ENST00000588269 TEFQ10587 303 aa15.59■□□□□ 0.09
PRKCSH-207ENST00000588269 RTF1Q92541 710 aaKnown RBP15.59■□□□□ 0.09
PRKCSH-207ENST00000588269 CD2APQ9Y5K6 639 aa15.59■□□□□ 0.09
PRKCSH-207ENST00000588269 ADAMTS7Q9UKP4 1686 aa15.59■□□□□ 0.09
PRKCSH-207ENST00000588269 TTC5Q8N0Z6 440 aa15.58■□□□□ 0.08
PRKCSH-207ENST00000588269 NFATC2IPQ8NCF5 419 aa15.58■□□□□ 0.08
PRKCSH-207ENST00000588269 MAPK8IP3Q9UPT6 1336 aa15.58■□□□□ 0.08
PRKCSH-207ENST00000588269 GNPATO15228 680 aa15.57■□□□□ 0.08
PRKCSH-207ENST00000588269 CICQ96RK0 1608 aaPredicted RBP15.57■□□□□ 0.08
PRKCSH-207ENST00000588269 CNTNAP4Q9C0A0 1308 aa15.56■□□□□ 0.08
PRKCSH-207ENST00000588269 ADCY9O60503 1353 aa15.55■□□□□ 0.08
PRKCSH-207ENST00000588269 PTCD1O75127 700 aaKnown RBP15.55■□□□□ 0.08
PRKCSH-207ENST00000588269 ADRA2BP18089 450 aa15.55■□□□□ 0.08
PRKCSH-207ENST00000588269 RTCBQ9Y3I0 505 aaKnown RBP15.55■□□□□ 0.08
PRKCSH-207ENST00000588269 SLC4A9Q96Q91 983 aa15.54■□□□□ 0.08
PRKCSH-207ENST00000588269 VIRMAQ69YN4 1812 aaKnown RBP15.54■□□□□ 0.08
PRKCSH-207ENST00000588269 N4BP2Q86UW6 1770 aaPredicted RBP15.54■□□□□ 0.08
PRKCSH-207ENST00000588269 COL5A3P25940 1745 aaPredicted RBP15.54■□□□□ 0.08
PRKCSH-207ENST00000588269 HTATSF1O43719 755 aaKnown RBP15.53■□□□□ 0.08
PRKCSH-207ENST00000588269 WDR43Q15061 677 aaKnown RBP eCLIP15.53■□□□□ 0.08
PRKCSH-207ENST00000588269 RC3H1Q5TC82 1133 aaKnown RBP15.53■□□□□ 0.08
PRKCSH-207ENST00000588269 LGR6Q9HBX8 967 aa15.53■□□□□ 0.08
PRKCSH-207ENST00000588269 GPBP1L1Q9HC44 474 aaPredicted RBP15.53■□□□□ 0.08
PRKCSH-207ENST00000588269 CEMIPQ8WUJ3 1361 aa15.52■□□□□ 0.08
PRKCSH-207ENST00000588269 KIAA1551Q9HCM1 1747 aa15.52■□□□□ 0.08
PRKCSH-207ENST00000588269 MMP10P09238 476 aa15.52■□□□□ 0.08
PRKCSH-207ENST00000588269 VSIG10Q8N0Z9 540 aa15.52■□□□□ 0.08
PRKCSH-207ENST00000588269 PHACTR3Q96KR7 559 aa15.51■□□□□ 0.07
PRKCSH-207ENST00000588269 KCPQ6ZWJ8 1503 aa15.5■□□□□ 0.07
PRKCSH-207ENST00000588269 ZNF316A6NFI3 1004 aaPredicted RBP15.5■□□□□ 0.07
PRKCSH-207ENST00000588269 TRAPPC3LQ5T215 181 aa15.5■□□□□ 0.07
PRKCSH-207ENST00000588269 PRKRIP1Q9H875 184 aaPredicted RBP15.5■□□□□ 0.07
PRKCSH-207ENST00000588269 PXDNLA1KZ92 1463 aa15.5■□□□□ 0.07
PRKCSH-207ENST00000588269 UBR2Q8IWV8 1755 aa15.49■□□□□ 0.07
PRKCSH-207ENST00000588269 TJP1Q07157 1748 aa15.49■□□□□ 0.07
PRKCSH-207ENST00000588269 STARD3NLO95772 234 aa15.49■□□□□ 0.07
PRKCSH-207ENST00000588269 LMOD3Q0VAK6 560 aa15.49■□□□□ 0.07
PRKCSH-207ENST00000588269 ZNF790Q6PG37 636 aa15.49■□□□□ 0.07
PRKCSH-207ENST00000588269 TEX13AQ9BXU3 409 aaPredicted RBP15.49■□□□□ 0.07
PRKCSH-207ENST00000588269 MYH14Q7Z406 1995 aaKnown RBP15.48■□□□□ 0.07
PRKCSH-207ENST00000588269 A0A0G2JLW4 131 aa15.48■□□□□ 0.07
PRKCSH-207ENST00000588269 BTBD11A6QL63 1104 aa15.48■□□□□ 0.07
PRKCSH-207ENST00000588269 RPS6KA4O75676 772 aa15.48■□□□□ 0.07
PRKCSH-207ENST00000588269 RFC4P35249 363 aa15.48■□□□□ 0.07
PRKCSH-207ENST00000588269 CRKLP46109 303 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms