RNA–Protein interactions for RNA: ENST00000588012.5

PTPRS-205, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRS, Length 5,993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-205ENST00000588012 IFIT5Q13325 482 aaKnown RBP18.77■□□□□ 0.6
PTPRS-205ENST00000588012 ALDH1L2Q3SY69 923 aa18.77■□□□□ 0.6
PTPRS-205ENST00000588012 TRMT112Q9UI30 125 aaKnown RBP18.77■□□□□ 0.6
PTPRS-205ENST00000588012 PIBF1Q8WXW3 757 aa18.77■□□□□ 0.59
PTPRS-205ENST00000588012 EXOC6BQ9Y2D4 811 aa18.77■□□□□ 0.59
PTPRS-205ENST00000588012 SLC5A1P13866 664 aa18.76■□□□□ 0.59
PTPRS-205ENST00000588012 DZIP1Q86YF9 867 aaKnown RBP18.76■□□□□ 0.59
PTPRS-205ENST00000588012 SPATA32Q96LK8 384 aa18.76■□□□□ 0.59
PTPRS-205ENST00000588012 DEF6Q9H4E7 631 aa18.76■□□□□ 0.59
PTPRS-205ENST00000588012 CFAP45Q9UL16 551 aa18.76■□□□□ 0.59
PTPRS-205ENST00000588012 TXLNBQ8N3L3 684 aa18.76■□□□□ 0.59
PTPRS-205ENST00000588012 HYPKQ9NX55 129 aa18.76■□□□□ 0.59
PTPRS-205ENST00000588012 SEC63Q9UGP8 760 aaKnown RBP18.76■□□□□ 0.59
PTPRS-205ENST00000588012 EMILIN1Q9Y6C2 1016 aa18.76■□□□□ 0.59
PTPRS-205ENST00000588012 FANCAO15360 1455 aa18.76■□□□□ 0.59
PTPRS-205ENST00000588012 MATR3P43243 847 aaKnown RBP eCLIP18.75■□□□□ 0.593e-9■■■□□ 18.4
PTPRS-205ENST00000588012 GLRX3O76003 335 aaKnown RBP18.75■□□□□ 0.59
PTPRS-205ENST00000588012 MX1P20591 662 aa18.75■□□□□ 0.59
PTPRS-205ENST00000588012 BCL11BQ9C0K0 894 aaPredicted RBP18.75■□□□□ 0.59
PTPRS-205ENST00000588012 ADGRF5Q8IZF2 1346 aa18.75■□□□□ 0.59
PTPRS-205ENST00000588012 WDR97A6NE52 1622 aa18.75■□□□□ 0.59
PTPRS-205ENST00000588012 MKNK2Q9HBH9 465 aa18.75■□□□□ 0.59
PTPRS-205ENST00000588012 CEP131Q9UPN4 1083 aa18.75■□□□□ 0.59
PTPRS-205ENST00000588012 U3KPZ7 1027 aaPredicted RBP18.75■□□□□ 0.59
PTPRS-205ENST00000588012 CEP57L1Q8IYX8 460 aa18.74■□□□□ 0.59
PTPRS-205ENST00000588012 CASTP20810 708 aaKnown RBP18.74■□□□□ 0.59
PTPRS-205ENST00000588012 IDI1Q13907 227 aa18.74■□□□□ 0.59
PTPRS-205ENST00000588012 NCOA1Q15788 1441 aa18.74■□□□□ 0.59
PTPRS-205ENST00000588012 ANKRD18BA2A2Z9 1011 aa18.74■□□□□ 0.59
PTPRS-205ENST00000588012 CBFA2T2O43439 604 aa18.74■□□□□ 0.59
PTPRS-205ENST00000588012 TTC21BQ7Z4L5 1316 aa18.73■□□□□ 0.59
PTPRS-205ENST00000588012 MAP3K12Q12852 859 aa18.73■□□□□ 0.59
PTPRS-205ENST00000588012 TNIP1Q15025 636 aa18.73■□□□□ 0.59
PTPRS-205ENST00000588012 NOS1P29475 1434 aa18.73■□□□□ 0.59
PTPRS-205ENST00000588012 MINDY4BA8MYZ0 360 aa18.73■□□□□ 0.59
PTPRS-205ENST00000588012 DNAAF4Q8WXU2 420 aa18.72■□□□□ 0.59
PTPRS-205ENST00000588012 SLF2Q8IX21 1173 aa18.72■□□□□ 0.59
PTPRS-205ENST00000588012 TEX13AQ9BXU3 409 aaPredicted RBP18.72■□□□□ 0.59
PTPRS-205ENST00000588012 PDIA4P13667 645 aaKnown RBP18.72■□□□□ 0.59
PTPRS-205ENST00000588012 WDHD1O75717 1129 aaPredicted RBP18.71■□□□□ 0.59
PTPRS-205ENST00000588012 NAPBQ9H115 298 aa18.71■□□□□ 0.59
PTPRS-205ENST00000588012 DBF4Q9UBU7 674 aaPredicted RBP18.71■□□□□ 0.59
PTPRS-205ENST00000588012 SPC24Q8NBT2 197 aa18.71■□□□□ 0.59
PTPRS-205ENST00000588012 BOLA2Q9H3K6 86 aa18.71■□□□□ 0.59
PTPRS-205ENST00000588012 ERLIN2O94905 339 aa18.7■□□□□ 0.58
PTPRS-205ENST00000588012 IFNL2Q8IZJ0 200 aa18.7■□□□□ 0.58
PTPRS-205ENST00000588012 NSD2O96028 1365 aa18.7■□□□□ 0.58
PTPRS-205ENST00000588012 SCAF11Q99590 1463 aaKnown RBP18.69■□□□□ 0.58
PTPRS-205ENST00000588012 NOM1Q5C9Z4 860 aaKnown RBP18.69■□□□□ 0.58
PTPRS-205ENST00000588012 SMARCA5O60264 1052 aaPredicted RBP18.69■□□□□ 0.58
PTPRS-205ENST00000588012 SEPT11Q9NVA2 429 aaKnown RBP18.69■□□□□ 0.58
PTPRS-205ENST00000588012 DDX11Q96FC9 970 aa18.68■□□□□ 0.58
PTPRS-205ENST00000588012 PRPF40BQ6NWY9 871 aaKnown RBP18.68■□□□□ 0.58
PTPRS-205ENST00000588012 ZNF444Q8N0Y2 327 aaPredicted RBP18.68■□□□□ 0.58
PTPRS-205ENST00000588012 TNRQ92752 1358 aa18.68■□□□□ 0.58
PTPRS-205ENST00000588012 DESP17661 470 aa18.68■□□□□ 0.58
PTPRS-205ENST00000588012 SKIDA1Q1XH10 827 aa18.68■□□□□ 0.58
PTPRS-205ENST00000588012 SSH1Q8WYL5 1049 aa18.68■□□□□ 0.58
PTPRS-205ENST00000588012 CADPS2Q86UW7 1296 aa18.68■□□□□ 0.58
PTPRS-205ENST00000588012 CCDC181Q5TID7 509 aa18.67■□□□□ 0.58
PTPRS-205ENST00000588012 BACH2Q9BYV9 841 aa18.67■□□□□ 0.58
PTPRS-205ENST00000588012 A0A087WZG4 1122 aa18.67■□□□□ 0.58
PTPRS-205ENST00000588012 CCDC184Q52MB2 194 aa18.67■□□□□ 0.58
PTPRS-205ENST00000588012 CCDC196A0A1B0GTZ2 297 aa18.67■□□□□ 0.58
PTPRS-205ENST00000588012 NUP62CLQ9H1M0 184 aa18.67■□□□□ 0.58
PTPRS-205ENST00000588012 PTPRCP08575 1304 aa18.67■□□□□ 0.58
PTPRS-205ENST00000588012 GPTP24298 496 aa18.67■□□□□ 0.58
PTPRS-205ENST00000588012 TTLL12Q14166 644 aaPredicted RBP18.67■□□□□ 0.58
PTPRS-205ENST00000588012 ZNF219Q9P2Y4 722 aaPredicted RBP18.67■□□□□ 0.58
PTPRS-205ENST00000588012 NKTRP30414 1462 aaKnown RBP18.66■□□□□ 0.58
PTPRS-205ENST00000588012 F6X3S4 739 aa18.66■□□□□ 0.58
PTPRS-205ENST00000588012 TRIM21P19474 475 aaKnown RBP18.66■□□□□ 0.58
PTPRS-205ENST00000588012 RARSP54136 660 aaKnown RBP18.66■□□□□ 0.58
PTPRS-205ENST00000588012 ZBTB3Q9H5J0 574 aa18.66■□□□□ 0.58
PTPRS-205ENST00000588012 LRRFIP2Q9Y608 721 aaKnown RBP18.66■□□□□ 0.58
PTPRS-205ENST00000588012 CCDC96Q2M329 555 aa18.66■□□□□ 0.58
PTPRS-205ENST00000588012 CTCFLQ8NI51 663 aaPredicted RBP18.66■□□□□ 0.58
PTPRS-205ENST00000588012 DHX29Q7Z478 1369 aaKnown RBP18.66■□□□□ 0.58
PTPRS-205ENST00000588012 ANKRD24Q8TF21 1146 aa18.66■□□□□ 0.58
PTPRS-205ENST00000588012 MSH6P52701 1360 aa18.66■□□□□ 0.58
PTPRS-205ENST00000588012 CCDC8Q9H0W5 538 aaPredicted RBP18.66■□□□□ 0.58
PTPRS-205ENST00000588012 C14orf93Q9H972 538 aaKnown RBP18.65■□□□□ 0.58
PTPRS-205ENST00000588012 CUL5Q93034 780 aa18.65■□□□□ 0.58
PTPRS-205ENST00000588012 RNF41Q9H4P4 317 aaPredicted RBP18.65■□□□□ 0.58
PTPRS-205ENST00000588012 RANBP6O60518 1105 aaKnown RBP18.65■□□□□ 0.58
PTPRS-205ENST00000588012 CDC5LQ99459 802 aaKnown RBP18.65■□□□□ 0.58
PTPRS-205ENST00000588012 SMTNL1A8MU46 457 aa18.65■□□□□ 0.58
PTPRS-205ENST00000588012 HMGB1P09429 215 aaKnown RBP18.65■□□□□ 0.58
PTPRS-205ENST00000588012 PPP4R3AQ6IN85 833 aa18.65■□□□□ 0.58
PTPRS-205ENST00000588012 IQCA1Q86XH1 822 aa18.65■□□□□ 0.58
PTPRS-205ENST00000588012 MAP3K2Q9Y2U5 619 aa18.65■□□□□ 0.58
PTPRS-205ENST00000588012 C6orf229H3BNL8 230 aa18.64■□□□□ 0.57
PTPRS-205ENST00000588012 PPP1R42Q7Z4L9 355 aa18.64■□□□□ 0.57
PTPRS-205ENST00000588012 CWC25Q9NXE8 425 aaPredicted RBP18.64■□□□□ 0.57
PTPRS-205ENST00000588012 ACEP12821 1306 aa18.64■□□□□ 0.57
PTPRS-205ENST00000588012 ZNF213O14771 459 aa18.64■□□□□ 0.57
PTPRS-205ENST00000588012 CIZ1Q9ULV3 898 aaPredicted RBP18.64■□□□□ 0.57
PTPRS-205ENST00000588012 UPF3BQ9BZI7 483 aaKnown RBP18.64■□□□□ 0.57
PTPRS-205ENST00000588012 PPP1R12BO60237 982 aaPredicted RBP18.63■□□□□ 0.57
PTPRS-205ENST00000588012 DDX46Q7L014 1031 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms