RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 HMGB2P26583 209 aaKnown RBP31.43■■■□□ 2.62
CHAF1A-205ENST00000587580 ADAMTS7Q9UKP4 1686 aa31.42■■■□□ 2.62
CHAF1A-205ENST00000587580 MRC1P22897 1456 aa31.41■■■□□ 2.62
CHAF1A-205ENST00000587580 RNMTO43148 476 aaKnown RBP31.41■■■□□ 2.62
CHAF1A-205ENST00000587580 NFATC2IPQ8NCF5 419 aa31.41■■■□□ 2.62
CHAF1A-205ENST00000587580 GAS2L2Q8NHY3 880 aa31.41■■■□□ 2.62
CHAF1A-205ENST00000587580 LGR6Q9HBX8 967 aa31.41■■■□□ 2.62
CHAF1A-205ENST00000587580 ATF5Q9Y2D1 282 aaPredicted RBP31.41■■■□□ 2.62
CHAF1A-205ENST00000587580 MTFR1LQ9H019 292 aa31.4■■■□□ 2.62
CHAF1A-205ENST00000587580 ATP6V1AP38606 617 aa31.39■■■□□ 2.62
CHAF1A-205ENST00000587580 MAP3K5Q99683 1374 aa31.39■■■□□ 2.62
CHAF1A-205ENST00000587580 RBM42Q9BTD8 480 aaKnown RBP31.38■■■□□ 2.61
CHAF1A-205ENST00000587580 SLC52A2Q9HAB3 445 aa31.38■■■□□ 2.61
CHAF1A-205ENST00000587580 PPP1R1BQ9UD71 204 aaPredicted RBP31.38■■■□□ 2.61
CHAF1A-205ENST00000587580 ITPK1Q13572 414 aa31.37■■■□□ 2.61
CHAF1A-205ENST00000587580 LINC00116Q8NCU8 138 aa31.37■■■□□ 2.61
CHAF1A-205ENST00000587580 PHACTR3Q96KR7 559 aa31.37■■■□□ 2.61
CHAF1A-205ENST00000587580 ZNF831Q5JPB2 1677 aa31.37■■■□□ 2.61
CHAF1A-205ENST00000587580 FCHSD2O94868 740 aa31.36■■■□□ 2.61
CHAF1A-205ENST00000587580 AK7Q96M32 723 aa31.36■■■□□ 2.61
CHAF1A-205ENST00000587580 MYBBP1AQ9BQG0 1328 aaKnown RBP31.34■■■□□ 2.61
CHAF1A-205ENST00000587580 GNAT3A8MTJ3 354 aa31.34■■■□□ 2.61
CHAF1A-205ENST00000587580 PTGER2P43116 358 aa31.34■■■□□ 2.61
CHAF1A-205ENST00000587580 UBR3Q6ZT12 1888 aa31.33■■■□□ 2.61
CHAF1A-205ENST00000587580 SLC16A10Q8TF71 515 aa31.33■■■□□ 2.61
CHAF1A-205ENST00000587580 SLC4A9Q96Q91 983 aa31.33■■■□□ 2.61
CHAF1A-205ENST00000587580 MSH5O43196 834 aa31.32■■■□□ 2.6
CHAF1A-205ENST00000587580 PTCD1O75127 700 aaKnown RBP31.31■■■□□ 2.6
CHAF1A-205ENST00000587580 COL23A1Q86Y22 540 aaPredicted RBP31.31■■■□□ 2.6
CHAF1A-205ENST00000587580 COL5A3P25940 1745 aaPredicted RBP31.31■■■□□ 2.6
CHAF1A-205ENST00000587580 FLAD1Q8NFF5 587 aa31.29■■■□□ 2.6
CHAF1A-205ENST00000587580 SGIP1Q9BQI5 828 aa31.28■■■□□ 2.6
CHAF1A-205ENST00000587580 COL24A1Q17RW2 1714 aa31.27■■■□□ 2.6
CHAF1A-205ENST00000587580 PHF14O94880 888 aa31.27■■■□□ 2.6
CHAF1A-205ENST00000587580 AMIGO3Q86WK7 504 aa31.27■■■□□ 2.6
CHAF1A-205ENST00000587580 IL17REQ8NFR9 667 aa31.27■■■□□ 2.6
CHAF1A-205ENST00000587580 CICQ96RK0 1608 aaPredicted RBP31.27■■■□□ 2.6
CHAF1A-205ENST00000587580 TJP1Q07157 1748 aa31.27■■■□□ 2.6
CHAF1A-205ENST00000587580 SIPA1L3O60292 1781 aaPredicted RBP31.26■■■□□ 2.59
CHAF1A-205ENST00000587580 GNPATO15228 680 aa31.26■■■□□ 2.59
CHAF1A-205ENST00000587580 SLC39A6Q13433 755 aa31.26■■■□□ 2.59
CHAF1A-205ENST00000587580 ZNF316A6NFI3 1004 aaPredicted RBP31.25■■■□□ 2.59
CHAF1A-205ENST00000587580 TEFQ10587 303 aa31.25■■■□□ 2.59
CHAF1A-205ENST00000587580 PRKRIP1Q9H875 184 aaPredicted RBP31.25■■■□□ 2.59
CHAF1A-205ENST00000587580 NEFMP07197 916 aa31.24■■■□□ 2.59
CHAF1A-205ENST00000587580 SMIM5Q71RC9 77 aa31.24■■■□□ 2.59
CHAF1A-205ENST00000587580 KCPQ6ZWJ8 1503 aa31.24■■■□□ 2.59
CHAF1A-205ENST00000587580 CEMIPQ8WUJ3 1361 aa31.23■■■□□ 2.59
CHAF1A-205ENST00000587580 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.23■■■□□ 2.59
CHAF1A-205ENST00000587580 SSFA2P28290 1259 aa31.23■■■□□ 2.59
CHAF1A-205ENST00000587580 UBR2Q8IWV8 1755 aa31.22■■■□□ 2.59
CHAF1A-205ENST00000587580 CNTNAP4Q9C0A0 1308 aa31.22■■■□□ 2.59
CHAF1A-205ENST00000587580 POLD1P28340 1107 aa31.21■■■□□ 2.59
CHAF1A-205ENST00000587580 RTF1Q92541 710 aaKnown RBP31.21■■■□□ 2.59
CHAF1A-205ENST00000587580 ARXQ96QS3 562 aa31.2■■■□□ 2.59
CHAF1A-205ENST00000587580 PLEKHF1Q96S99 279 aa31.2■■■□□ 2.59
CHAF1A-205ENST00000587580 RC3H1Q5TC82 1133 aaKnown RBP31.19■■■□□ 2.58
CHAF1A-205ENST00000587580 MSL1Q68DK7 614 aa31.19■■■□□ 2.58
CHAF1A-205ENST00000587580 PNNQ9H307 717 aaKnown RBP31.19■■■□□ 2.58
CHAF1A-205ENST00000587580 MYH14Q7Z406 1995 aaKnown RBP31.19■■■□□ 2.58
CHAF1A-205ENST00000587580 DLG5Q8TDM6 1919 aa31.18■■■□□ 2.58
CHAF1A-205ENST00000587580 TTC5Q8N0Z6 440 aa31.18■■■□□ 2.58
CHAF1A-205ENST00000587580 RTCBQ9Y3I0 505 aaKnown RBP31.18■■■□□ 2.58
CHAF1A-205ENST00000587580 MCM10Q7L590 875 aa31.17■■■□□ 2.58
CHAF1A-205ENST00000587580 MAPK8IP3Q9UPT6 1336 aa31.17■■■□□ 2.58
CHAF1A-205ENST00000587580 DNAJC10Q8IXB1 793 aa31.16■■■□□ 2.58
CHAF1A-205ENST00000587580 CRKLP46109 303 aaKnown RBP31.15■■■□□ 2.58
CHAF1A-205ENST00000587580 FHDC1Q9C0D6 1143 aaPredicted RBP31.15■■■□□ 2.58
CHAF1A-205ENST00000587580 HTATSF1O43719 755 aaKnown RBP31.14■■■□□ 2.58
CHAF1A-205ENST00000587580 DCTN1Q14203 1278 aa31.14■■■□□ 2.58
CHAF1A-205ENST00000587580 RPS6KA4O75676 772 aa31.13■■■□□ 2.57
CHAF1A-205ENST00000587580 ZNF790Q6PG37 636 aa31.13■■■□□ 2.57
CHAF1A-205ENST00000587580 NFE2L2Q16236 605 aa31.12■■■□□ 2.57
CHAF1A-205ENST00000587580 BTBD11A6QL63 1104 aa31.11■■■□□ 2.57
CHAF1A-205ENST00000587580 TRAPPC3LQ5T215 181 aa31.11■■■□□ 2.57
CHAF1A-205ENST00000587580 VSIG10Q8N0Z9 540 aa31.11■■■□□ 2.57
CHAF1A-205ENST00000587580 C4AP0C0L4 1744 aa31.1■■■□□ 2.57
CHAF1A-205ENST00000587580 ADRA2BP18089 450 aa31.1■■■□□ 2.57
CHAF1A-205ENST00000587580 WDR43Q15061 677 aaKnown RBP eCLIP31.1■■■□□ 2.57
CHAF1A-205ENST00000587580 SYT17Q9BSW7 474 aa31.1■■■□□ 2.57
CHAF1A-205ENST00000587580 KLHL34Q8N239 644 aa31.09■■■□□ 2.57
CHAF1A-205ENST00000587580 ZNF496Q96IT1 587 aaPredicted RBP31.09■■■□□ 2.57
CHAF1A-205ENST00000587580 HEG1Q9ULI3 1381 aa31.08■■■□□ 2.57
CHAF1A-205ENST00000587580 ARHGEF1Q92888 912 aaKnown RBP31.08■■■□□ 2.57
CHAF1A-205ENST00000587580 CCDC87Q9NVE4 849 aa31.08■■■□□ 2.57
CHAF1A-205ENST00000587580 CYP19A1P11511 503 aaPredicted RBP31.07■■■□□ 2.56
CHAF1A-205ENST00000587580 INTS5Q6P9B9 1019 aaKnown RBP31.07■■■□□ 2.56
CHAF1A-205ENST00000587580 KCNQ3O43525 872 aa31.05■■■□□ 2.56
CHAF1A-205ENST00000587580 RFC4P35249 363 aa31.05■■■□□ 2.56
CHAF1A-205ENST00000587580 FMNL2Q96PY5 1086 aa31.05■■■□□ 2.56
CHAF1A-205ENST00000587580 CCDC146Q8IYE0 955 aa31.03■■■□□ 2.56
CHAF1A-205ENST00000587580 ZBTB1Q9Y2K1 713 aa31.02■■■□□ 2.56
CHAF1A-205ENST00000587580 TAF7Q15545 349 aaPredicted RBP31.01■■■□□ 2.55
CHAF1A-205ENST00000587580 SOS1Q07889 1333 aaPredicted RBP31■■■□□ 2.55
CHAF1A-205ENST00000587580 STARD3NLO95772 234 aa31■■■□□ 2.55
CHAF1A-205ENST00000587580 THUMPD2Q9BTF0 503 aaKnown RBP31■■■□□ 2.55
CHAF1A-205ENST00000587580 ADAMTS8Q9UP79 889 aa31■■■□□ 2.55
CHAF1A-205ENST00000587580 RIPK4P57078 832 aa30.99■■■□□ 2.55
CHAF1A-205ENST00000587580 TEX13AQ9BXU3 409 aaPredicted RBP30.99■■■□□ 2.55
CHAF1A-205ENST00000587580 KDM3BQ7LBC6 1761 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms