RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 CHD4Q14839 1912 aa23.98■■□□□ 1.43
H3F3B-206ENST00000587560 WDR63Q8IWG1 891 aa23.98■■□□□ 1.43
H3F3B-206ENST00000587560 THUMPD2Q9BTF0 503 aaKnown RBP23.98■■□□□ 1.43
H3F3B-206ENST00000587560 PDE3BQ13370 1112 aa23.97■■□□□ 1.43
H3F3B-206ENST00000587560 SALL2Q9Y467 1007 aaPredicted RBP23.97■■□□□ 1.43
H3F3B-206ENST00000587560 IL16Q14005 1332 aa23.96■■□□□ 1.43
H3F3B-206ENST00000587560 RTF1Q92541 710 aaKnown RBP23.96■■□□□ 1.43
H3F3B-206ENST00000587560 NHSQ6T4R5 1651 aa23.95■■□□□ 1.43
H3F3B-206ENST00000587560 A0A0G2JS52 829 aa23.95■■□□□ 1.42
H3F3B-206ENST00000587560 ERVV-2B6SEH9 535 aa23.95■■□□□ 1.42
H3F3B-206ENST00000587560 ZNF853P0CG23 659 aa23.95■■□□□ 1.42
H3F3B-206ENST00000587560 MYT1Q01538 1121 aa23.95■■□□□ 1.42
H3F3B-206ENST00000587560 KDM3BQ7LBC6 1761 aa23.95■■□□□ 1.42
H3F3B-206ENST00000587560 PAPPAQ13219 1627 aa23.95■■□□□ 1.42
H3F3B-206ENST00000587560 EZH2Q15910 746 aaKnown RBP23.93■■□□□ 1.42
H3F3B-206ENST00000587560 SLC52A2Q9HAB3 445 aa23.93■■□□□ 1.42
H3F3B-206ENST00000587560 SPINK5Q9NQ38 1064 aaPredicted RBP23.93■■□□□ 1.42
H3F3B-206ENST00000587560 TRMT2AQ8IZ69 625 aaKnown RBP23.92■■□□□ 1.42
H3F3B-206ENST00000587560 PPP1R1BQ9UD71 204 aaPredicted RBP23.91■■□□□ 1.42
H3F3B-206ENST00000587560 YTHDC1Q96MU7 727 aaKnown RBP23.9■■□□□ 1.42
H3F3B-206ENST00000587560 BABAM1Q9NWV8 329 aa23.9■■□□□ 1.42
H3F3B-206ENST00000587560 UBR2Q8IWV8 1755 aa23.9■■□□□ 1.42
H3F3B-206ENST00000587560 RREB1Q92766 1687 aa23.89■■□□□ 1.42
H3F3B-206ENST00000587560 CHL1O00533 1208 aa23.89■■□□□ 1.41
H3F3B-206ENST00000587560 CALD1Q05682 793 aaKnown RBP23.89■■□□□ 1.41
H3F3B-206ENST00000587560 TAF7Q15545 349 aaPredicted RBP23.89■■□□□ 1.41
H3F3B-206ENST00000587560 FAM182BQ5T319 152 aa23.89■■□□□ 1.41
H3F3B-206ENST00000587560 CFAP44Q96MT7 982 aa23.89■■□□□ 1.41
H3F3B-206ENST00000587560 IFT57Q9NWB7 429 aa23.89■■□□□ 1.41
H3F3B-206ENST00000587560 KAT6BQ8WYB5 2073 aa23.88■■□□□ 1.41
H3F3B-206ENST00000587560 GOLGA2Q08379 1002 aa23.88■■□□□ 1.41
H3F3B-206ENST00000587560 SLFN5Q08AF3 891 aa23.88■■□□□ 1.41
H3F3B-206ENST00000587560 NFATC2IPQ8NCF5 419 aa23.88■■□□□ 1.41
H3F3B-206ENST00000587560 NUP188Q5SRE5 1749 aa23.87■■□□□ 1.41
H3F3B-206ENST00000587560 FAM196AQ6ZSG2 479 aa23.87■■□□□ 1.41
H3F3B-206ENST00000587560 CDCA7LQ96GN5 454 aa23.87■■□□□ 1.41
H3F3B-206ENST00000587560 BTAF1O14981 1849 aa23.87■■□□□ 1.41
H3F3B-206ENST00000587560 PRIM1P49642 420 aaKnown RBP23.86■■□□□ 1.41
H3F3B-206ENST00000587560 TEFQ10587 303 aa23.86■■□□□ 1.41
H3F3B-206ENST00000587560 PIGBQ92521 554 aa23.86■■□□□ 1.41
H3F3B-206ENST00000587560 CABP4P57796 275 aa23.85■■□□□ 1.41
H3F3B-206ENST00000587560 GNAI1P63096 354 aa23.85■■□□□ 1.41
H3F3B-206ENST00000587560 CAMKK2Q96RR4 588 aa23.85■■□□□ 1.41
H3F3B-206ENST00000587560 E9PSI1 815 aa23.84■■□□□ 1.41
H3F3B-206ENST00000587560 KCNQ2O43526 872 aa23.84■■□□□ 1.41
H3F3B-206ENST00000587560 SPON1Q9HCB6 807 aa23.84■■□□□ 1.41
H3F3B-206ENST00000587560 PTF1AQ7RTS3 328 aa23.83■■□□□ 1.41
H3F3B-206ENST00000587560 MBIPQ9NS73 344 aa23.83■■□□□ 1.41
H3F3B-206ENST00000587560 KCPQ6ZWJ8 1503 aa23.83■■□□□ 1.41
H3F3B-206ENST00000587560 DUSP27Q5VZP5 1158 aa23.82■■□□□ 1.4
H3F3B-206ENST00000587560 ACSBG1Q96GR2 724 aa23.82■■□□□ 1.4
H3F3B-206ENST00000587560 TMOD3Q9NYL9 352 aa23.82■■□□□ 1.4
H3F3B-206ENST00000587560 HEG1Q9ULI3 1381 aa23.81■■□□□ 1.4
H3F3B-206ENST00000587560 MIS18AQ9NYP9 233 aa23.81■■□□□ 1.4
H3F3B-206ENST00000587560 FANCIQ9NVI1 1328 aa23.81■■□□□ 1.4
H3F3B-206ENST00000587560 BTBD11A6QL63 1104 aa23.8■■□□□ 1.4
H3F3B-206ENST00000587560 KCNQ3O43525 872 aa23.8■■□□□ 1.4
H3F3B-206ENST00000587560 CICQ96RK0 1608 aaPredicted RBP23.8■■□□□ 1.4
H3F3B-206ENST00000587560 ZNF831Q5JPB2 1677 aa23.79■■□□□ 1.4
H3F3B-206ENST00000587560 LY75O60449 1722 aa23.79■■□□□ 1.4
H3F3B-206ENST00000587560 ZNF790Q6PG37 636 aa23.79■■□□□ 1.4
H3F3B-206ENST00000587560 BCL11BQ9C0K0 894 aaPredicted RBP23.79■■□□□ 1.4
H3F3B-206ENST00000587560 ATG3Q9NT62 314 aa23.79■■□□□ 1.4
H3F3B-206ENST00000587560 TSR2Q969E8 191 aaKnown RBP23.78■■□□□ 1.4
H3F3B-206ENST00000587560 MYH16Q9H6N6 1097 aa23.78■■□□□ 1.4
H3F3B-206ENST00000587560 TSPYL4Q9UJ04 414 aa23.78■■□□□ 1.4
H3F3B-206ENST00000587560 SLC39A6Q13433 755 aa23.77■■□□□ 1.4
H3F3B-206ENST00000587560 ASAP1Q9ULH1 1129 aa23.77■■□□□ 1.4
H3F3B-206ENST00000587560 EIF4A1P60842 406 aaKnown RBP23.76■■□□□ 1.39
H3F3B-206ENST00000587560 SYTL4Q96C24 671 aaPredicted RBP23.75■■□□□ 1.39
H3F3B-206ENST00000587560 LAS1LQ9Y4W2 734 aaKnown RBP23.75■■□□□ 1.39
H3F3B-206ENST00000587560 C5P01031 1676 aa23.74■■□□□ 1.39
H3F3B-206ENST00000587560 RGPD3A6NKT7 1758 aaPredicted RBP23.74■■□□□ 1.39
H3F3B-206ENST00000587560 RGPD4Q7Z3J3 1758 aa23.74■■□□□ 1.39
H3F3B-206ENST00000587560 TRIM37O94972 964 aa23.73■■□□□ 1.39
H3F3B-206ENST00000587560 TJP1Q07157 1748 aa23.73■■□□□ 1.39
H3F3B-206ENST00000587560 GIGYF1O75420 1035 aaPredicted RBP23.72■■□□□ 1.39
H3F3B-206ENST00000587560 ZNF496Q96IT1 587 aaPredicted RBP23.72■■□□□ 1.39
H3F3B-206ENST00000587560 LAMB4A4D0S4 1761 aa23.71■■□□□ 1.39
H3F3B-206ENST00000587560 EXOSC9Q06265 439 aaKnown RBP23.71■■□□□ 1.39
H3F3B-206ENST00000587560 C8orf58Q8NAV2 365 aa23.71■■□□□ 1.39
H3F3B-206ENST00000587560 SLC4A9Q96Q91 983 aa23.71■■□□□ 1.39
H3F3B-206ENST00000587560 PALLDQ8WX93 1383 aa23.7■■□□□ 1.38
H3F3B-206ENST00000587560 KRT24Q2M2I5 525 aa23.7■■□□□ 1.38
H3F3B-206ENST00000587560 SMARCC1Q92922 1105 aaPredicted RBP23.7■■□□□ 1.38
H3F3B-206ENST00000587560 TSPYL6Q8N831 410 aa23.69■■□□□ 1.38
H3F3B-206ENST00000587560 SOS1Q07889 1333 aaPredicted RBP23.68■■□□□ 1.38
H3F3B-206ENST00000587560 TTC5Q8N0Z6 440 aa23.68■■□□□ 1.38
H3F3B-206ENST00000587560 VSIG10Q8N0Z9 540 aa23.68■■□□□ 1.38
H3F3B-206ENST00000587560 FMNL2Q96PY5 1086 aa23.68■■□□□ 1.38
H3F3B-206ENST00000587560 COL5A3P25940 1745 aaPredicted RBP23.67■■□□□ 1.38
H3F3B-206ENST00000587560 HOXB7P09629 217 aa23.67■■□□□ 1.38
H3F3B-206ENST00000587560 TAF1LQ8IZX4 1826 aa23.67■■□□□ 1.38
H3F3B-206ENST00000587560 CASZ1Q86V15 1759 aa23.67■■□□□ 1.38
H3F3B-206ENST00000587560 VAMP4O75379 141 aa23.66■■□□□ 1.38
H3F3B-206ENST00000587560 NBPF14Q5TI25 921 aa23.66■■□□□ 1.38
H3F3B-206ENST00000587560 PLSCR1O15162 318 aa23.65■■□□□ 1.38
H3F3B-206ENST00000587560 CT47B1P0C2W7 299 aaPredicted RBP23.65■■□□□ 1.38
H3F3B-206ENST00000587560 LOC102724428A0A0B4J2F2 783 aa23.64■■□□□ 1.37
H3F3B-206ENST00000587560 PRAMEF22A3QJZ6 481 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms