RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 ZCRB1Q8TBF4 217 aaKnown RBP11.55□□□□□ -0.56
GPATCH8-205ENST00000587228 C6orf229H3BNL8 230 aa11.55□□□□□ -0.56
GPATCH8-205ENST00000587228 HMGB2P26583 209 aaKnown RBP11.55□□□□□ -0.56
GPATCH8-205ENST00000587228 CAVIN1Q6NZI2 390 aaKnown RBP11.55□□□□□ -0.56
GPATCH8-205ENST00000587228 RPGRQ92834 1020 aaKnown RBP11.55□□□□□ -0.56
GPATCH8-205ENST00000587228 ZMYM3Q14202 1370 aa11.55□□□□□ -0.56
GPATCH8-205ENST00000587228 OLFM4Q6UX06 510 aa11.55□□□□□ -0.56
GPATCH8-205ENST00000587228 DUOX2Q9NRD8 1548 aa11.55□□□□□ -0.56
GPATCH8-205ENST00000587228 PPIP5K1Q6PFW1 1433 aa11.55□□□□□ -0.56
GPATCH8-205ENST00000587228 NSD2O96028 1365 aa11.55□□□□□ -0.56
GPATCH8-205ENST00000587228 ANKRD1Q15327 319 aa11.55□□□□□ -0.56
GPATCH8-205ENST00000587228 LARP1BQ659C4 914 aaKnown RBP11.55□□□□□ -0.56
GPATCH8-205ENST00000587228 BACH2Q9BYV9 841 aa11.55□□□□□ -0.56
GPATCH8-205ENST00000587228 UPF3BQ9BZI7 483 aaKnown RBP11.55□□□□□ -0.56
GPATCH8-205ENST00000587228 SNRPA1P09661 255 aaKnown RBP11.54□□□□□ -0.56
GPATCH8-205ENST00000587228 SOGA3Q5TF21 947 aa11.54□□□□□ -0.56
GPATCH8-205ENST00000587228 LDHAL6AQ6ZMR3 332 aa11.54□□□□□ -0.56
GPATCH8-205ENST00000587228 UGGT2Q9NYU1 1516 aa11.54□□□□□ -0.56
GPATCH8-205ENST00000587228 TTC21AQ8NDW8 1320 aa11.54□□□□□ -0.56
GPATCH8-205ENST00000587228 ANKRD18BA2A2Z9 1011 aa11.54□□□□□ -0.56
GPATCH8-205ENST00000587228 OFD1O75665 1012 aa11.54□□□□□ -0.56
GPATCH8-205ENST00000587228 KRT18P05783 430 aaKnown RBP11.54□□□□□ -0.56
GPATCH8-205ENST00000587228 TMEM132AQ24JP5 1023 aa11.54□□□□□ -0.56
GPATCH8-205ENST00000587228 PDRG1Q9NUG6 133 aa11.54□□□□□ -0.56
GPATCH8-205ENST00000587228 USP5P45974 858 aa11.54□□□□□ -0.56
GPATCH8-205ENST00000587228 PIP4K2AP48426 406 aaPredicted RBP11.54□□□□□ -0.56
GPATCH8-205ENST00000587228 TXLNAP40222 546 aa11.54□□□□□ -0.56
GPATCH8-205ENST00000587228 TEX13AQ9BXU3 409 aaPredicted RBP11.54□□□□□ -0.56
GPATCH8-205ENST00000587228 SNRKQ9NRH2 765 aa11.54□□□□□ -0.56
GPATCH8-205ENST00000587228 ANKRD36BQ8N2N9 1353 aa11.54□□□□□ -0.56
GPATCH8-205ENST00000587228 ABCC10Q5T3U5 1492 aa11.53□□□□□ -0.56
GPATCH8-205ENST00000587228 EPS15P42566 896 aa11.53□□□□□ -0.56
GPATCH8-205ENST00000587228 MPHOSPH10O00566 681 aaKnown RBP11.53□□□□□ -0.56
GPATCH8-205ENST00000587228 RFC4P35249 363 aa11.53□□□□□ -0.56
GPATCH8-205ENST00000587228 DZIP1Q86YF9 867 aaKnown RBP11.53□□□□□ -0.56
GPATCH8-205ENST00000587228 RAB11FIP3O75154 756 aa11.53□□□□□ -0.56
GPATCH8-205ENST00000587228 ME1P48163 572 aa11.53□□□□□ -0.56
GPATCH8-205ENST00000587228 IMMTQ16891 758 aaKnown RBP11.53□□□□□ -0.56
GPATCH8-205ENST00000587228 DDX11Q96FC9 970 aa11.53□□□□□ -0.56
GPATCH8-205ENST00000587228 ZNF396Q96N95 335 aaPredicted RBP11.53□□□□□ -0.56
GPATCH8-205ENST00000587228 ZHX3Q9H4I2 956 aa11.53□□□□□ -0.56
GPATCH8-205ENST00000587228 POLR3DP05423 398 aaPredicted RBP11.52□□□□□ -0.56
GPATCH8-205ENST00000587228 NAP1L1P55209 391 aaKnown RBP11.52□□□□□ -0.56
GPATCH8-205ENST00000587228 DDB1Q16531 1140 aa11.52□□□□□ -0.56
GPATCH8-205ENST00000587228 GOLGA6L1Q8N7Z2 621 aa11.52□□□□□ -0.56
GPATCH8-205ENST00000587228 NKTRP30414 1462 aaKnown RBP11.52□□□□□ -0.56
GPATCH8-205ENST00000587228 ANKRD13DQ6ZTN6 518 aa11.52□□□□□ -0.56
GPATCH8-205ENST00000587228 PDILTQ8N807 584 aa11.52□□□□□ -0.56
GPATCH8-205ENST00000587228 CASTP20810 708 aaKnown RBP11.52□□□□□ -0.57
GPATCH8-205ENST00000587228 EIF4A2Q14240 407 aaKnown RBP11.52□□□□□ -0.57
GPATCH8-205ENST00000587228 CWC25Q9NXE8 425 aaPredicted RBP11.52□□□□□ -0.57
GPATCH8-205ENST00000587228 POLKQ9UBT6 870 aa11.52□□□□□ -0.57
GPATCH8-205ENST00000587228 K7ELQ4 463 aaPredicted RBP11.52□□□□□ -0.57
GPATCH8-205ENST00000587228 TRAK2O60296 914 aa11.52□□□□□ -0.57
GPATCH8-205ENST00000587228 PRPF40BQ6NWY9 871 aaKnown RBP11.52□□□□□ -0.57
GPATCH8-205ENST00000587228 CRACR2BQ8N4Y2 399 aaPredicted RBP11.52□□□□□ -0.57
GPATCH8-205ENST00000587228 NAT10Q9H0A0 1025 aaKnown RBP11.52□□□□□ -0.57
GPATCH8-205ENST00000587228 GCP02774 474 aa11.51□□□□□ -0.57
GPATCH8-205ENST00000587228 NAPBQ9H115 298 aa11.51□□□□□ -0.57
GPATCH8-205ENST00000587228 MKNK2Q9HBH9 465 aa11.51□□□□□ -0.57
GPATCH8-205ENST00000587228 MAP3K12Q12852 859 aa11.51□□□□□ -0.57
GPATCH8-205ENST00000587228 KRT32Q14532 448 aa11.51□□□□□ -0.57
GPATCH8-205ENST00000587228 CT47A1Q5JQC4 288 aaPredicted RBP11.51□□□□□ -0.57
GPATCH8-205ENST00000587228 SLC5A1P13866 664 aa11.51□□□□□ -0.57
GPATCH8-205ENST00000587228 JMYQ8N9B5 988 aa11.51□□□□□ -0.57
GPATCH8-205ENST00000587228 CHPF2Q9P2E5 772 aa11.51□□□□□ -0.57
GPATCH8-205ENST00000587228 KIAA0556O60303 1618 aa11.51□□□□□ -0.57
GPATCH8-205ENST00000587228 BRPF1P55201 1214 aaPredicted RBP11.51□□□□□ -0.57
GPATCH8-205ENST00000587228 COPS6Q7L5N1 327 aa11.51□□□□□ -0.57
GPATCH8-205ENST00000587228 CCDC82Q8N4S0 544 aa11.51□□□□□ -0.57
GPATCH8-205ENST00000587228 ZNF622Q969S3 477 aaKnown RBP eCLIP11.51□□□□□ -0.571e-6■■■□□ 16.1
GPATCH8-205ENST00000587228 ATP6V1AP38606 617 aa11.5□□□□□ -0.57
GPATCH8-205ENST00000587228 PPP1R42Q7Z4L9 355 aa11.5□□□□□ -0.57
GPATCH8-205ENST00000587228 XAGE3Q8WTP9 111 aa11.5□□□□□ -0.57
GPATCH8-205ENST00000587228 ADAMTS12P58397 1594 aa11.5□□□□□ -0.57
GPATCH8-205ENST00000587228 MBD3O95983 291 aa11.5□□□□□ -0.57
GPATCH8-205ENST00000587228 SSBP05455 408 aaKnown RBP eCLIP11.5□□□□□ -0.57
GPATCH8-205ENST00000587228 NBPF6Q5VWK0 638 aa11.5□□□□□ -0.57
GPATCH8-205ENST00000587228 DDX46Q7L014 1031 aaKnown RBP11.5□□□□□ -0.57
GPATCH8-205ENST00000587228 NBPF5PQ86XG9 351 aaPredicted RBP11.5□□□□□ -0.57
GPATCH8-205ENST00000587228 NBPF4Q96M43 638 aa11.5□□□□□ -0.57
GPATCH8-205ENST00000587228 U3KPZ7 1027 aaPredicted RBP11.5□□□□□ -0.57
GPATCH8-205ENST00000587228 PTPRCP08575 1304 aa11.5□□□□□ -0.57
GPATCH8-205ENST00000587228 FERMT3Q86UX7 667 aa11.5□□□□□ -0.57
GPATCH8-205ENST00000587228 TRIM5Q9C035 493 aa11.5□□□□□ -0.57
GPATCH8-205ENST00000587228 WWC3Q9ULE0 1092 aa11.5□□□□□ -0.57
GPATCH8-205ENST00000587228 TSHZ3Q63HK5 1081 aa11.49□□□□□ -0.57
GPATCH8-205ENST00000587228 NFATC2IPQ8NCF5 419 aa11.49□□□□□ -0.57
GPATCH8-205ENST00000587228 ABCC2Q92887 1545 aa11.49□□□□□ -0.57
GPATCH8-205ENST00000587228 WDR33Q9C0J8 1336 aaKnown RBP11.49□□□□□ -0.57
GPATCH8-205ENST00000587228 KRT85P78386 507 aa11.49□□□□□ -0.57
GPATCH8-205ENST00000587228 CDC5LQ99459 802 aaKnown RBP11.49□□□□□ -0.57
GPATCH8-205ENST00000587228 RANBP6O60518 1105 aaKnown RBP11.49□□□□□ -0.57
GPATCH8-205ENST00000587228 CDKL5O76039 1030 aa11.49□□□□□ -0.57
GPATCH8-205ENST00000587228 ZFYVE27Q5T4F4 411 aa11.49□□□□□ -0.57
GPATCH8-205ENST00000587228 TBX22Q9Y458 520 aa11.49□□□□□ -0.57
GPATCH8-205ENST00000587228 GOLIM4O00461 696 aa11.48□□□□□ -0.57
GPATCH8-205ENST00000587228 ORAI2Q96SN7 254 aa11.48□□□□□ -0.57
GPATCH8-205ENST00000587228 EIF4G3O43432 1585 aaKnown RBP11.48□□□□□ -0.57
GPATCH8-205ENST00000587228 PRAG1Q86YV5 1406 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms