RNA–Protein interactions for RNA: ENST00000587028.1

NKIRAS2-213, Transcript of NFKB inhibitor interacting Ras like 2, human

TSL 4

Gene NKIRAS2, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NKIRAS2-213	ENST00000587028	ASAP1	Q9ULH1	1129 aa		33.94	■■■■□ 3.02
NKIRAS2-213	ENST00000587028	HTATSF1	O43719	755 aa	Known RBP	33.93	■■■■□ 3.02
NKIRAS2-213	ENST00000587028	ATG3	Q9NT62	314 aa		33.93	■■■■□ 3.02
NKIRAS2-213	ENST00000587028	NBPF14	Q5TI25	921 aa		33.92	■■■■□ 3.02
NKIRAS2-213	ENST00000587028	LRRC4B	Q9NT99	713 aa		33.91	■■■■□ 3.02
NKIRAS2-213	ENST00000587028	CCNL1	Q9UK58	526 aa	Predicted RBP	33.91	■■■■□ 3.02
NKIRAS2-213	ENST00000587028	CEMIP	Q8WUJ3	1361 aa		33.9	■■■■□ 3.02
NKIRAS2-213	ENST00000587028	PNISR	Q8TF01	805 aa	Known RBP	33.9	■■■■□ 3.02
NKIRAS2-213	ENST00000587028	TEF	Q10587	303 aa		33.89	■■■■□ 3.02
NKIRAS2-213	ENST00000587028	DIEXF	Q68CQ4	756 aa	Known RBP	33.89	■■■■□ 3.02
NKIRAS2-213	ENST00000587028	SIPA1L3	O60292	1781 aa	Predicted RBP	33.89	■■■■□ 3.02
NKIRAS2-213	ENST00000587028	KCNQ4	P56696	695 aa		33.87	■■■■□ 3.01
NKIRAS2-213	ENST00000587028	MCM10	Q7L590	875 aa		33.87	■■■■□ 3.01
NKIRAS2-213	ENST00000587028	TMPO	P42166	694 aa	Known RBP	33.86	■■■■□ 3.01
NKIRAS2-213	ENST00000587028	PAPPA	Q13219	1627 aa		33.86	■■■■□ 3.01
NKIRAS2-213	ENST00000587028	LOC102724428	A0A0B4J2F2	783 aa		33.84	■■■■□ 3.01
NKIRAS2-213	ENST00000587028	SIK1	P57059	783 aa		33.84	■■■■□ 3.01
NKIRAS2-213	ENST00000587028	RIPK4	P57078	832 aa		33.84	■■■■□ 3.01
NKIRAS2-213	ENST00000587028	DCTN1	Q14203	1278 aa		33.84	■■■■□ 3.01
NKIRAS2-213	ENST00000587028	TAF1L	Q8IZX4	1826 aa		33.83	■■■■□ 3.01
NKIRAS2-213	ENST00000587028	HMGB2	P26583	209 aa	Known RBP	33.82	■■■■□ 3
NKIRAS2-213	ENST00000587028	ANO8	Q9HCE9	1232 aa	Predicted RBP	33.82	■■■■□ 3
NKIRAS2-213	ENST00000587028	STK32B	Q9NY57	414 aa		33.82	■■■■□ 3
NKIRAS2-213	ENST00000587028	C5	P01031	1676 aa		33.82	■■■■□ 3
NKIRAS2-213	ENST00000587028	R3HDM1	Q15032	1099 aa	Known RBP	33.81	■■■■□ 3
NKIRAS2-213	ENST00000587028	RBM42	Q9BTD8	480 aa	Known RBP	33.81	■■■■□ 3
NKIRAS2-213	ENST00000587028	SLC39A6	Q13433	755 aa		33.8	■■■■□ 3
NKIRAS2-213	ENST00000587028	RRP7A	Q9Y3A4	280 aa	Known RBP	33.8	■■■■□ 3
NKIRAS2-213	ENST00000587028	ZNF831	Q5JPB2	1677 aa		33.8	■■■■□ 3
NKIRAS2-213	ENST00000587028	PSD	A5PKW4	1024 aa	Predicted RBP	33.79	■■■■□ 3
NKIRAS2-213	ENST00000587028	LMOD3	Q0VAK6	560 aa		33.79	■■■■□ 3
NKIRAS2-213	ENST00000587028	NEUROD2	Q15784	382 aa		33.79	■■■■□ 3
NKIRAS2-213	ENST00000587028	PTCD1	O75127	700 aa	Known RBP	33.78	■■■■□ 3
NKIRAS2-213	ENST00000587028	ATP6V1A	P38606	617 aa		33.78	■■■■□ 3
NKIRAS2-213	ENST00000587028	SLC15A2	Q16348	729 aa		33.77	■■■■□ 3
NKIRAS2-213	ENST00000587028	UBR2	Q8IWV8	1755 aa		33.75	■■■□□ 2.99
NKIRAS2-213	ENST00000587028	BTBD11	A6QL63	1104 aa		33.75	■■■□□ 2.99
NKIRAS2-213	ENST00000587028	APAF1	O14727	1248 aa		33.75	■■■□□ 2.99
NKIRAS2-213	ENST00000587028	TTC5	Q8N0Z6	440 aa		33.75	■■■□□ 2.99
NKIRAS2-213	ENST00000587028	CCER2	I3L3R5	266 aa		33.74	■■■□□ 2.99
NKIRAS2-213	ENST00000587028	ZNF827	Q17R98	1081 aa		33.74	■■■□□ 2.99
NKIRAS2-213	ENST00000587028	AKT1S1	Q96B36	256 aa		33.74	■■■□□ 2.99
NKIRAS2-213	ENST00000587028	SLC4A9	Q96Q91	983 aa		33.74	■■■□□ 2.99
NKIRAS2-213	ENST00000587028	THUMPD2	Q9BTF0	503 aa	Known RBP	33.74	■■■□□ 2.99
NKIRAS2-213	ENST00000587028	ITPK1	Q13572	414 aa		33.73	■■■□□ 2.99
NKIRAS2-213	ENST00000587028	TAF7	Q15545	349 aa	Predicted RBP	33.73	■■■□□ 2.99
NKIRAS2-213	ENST00000587028	ZNF790	Q6PG37	636 aa		33.73	■■■□□ 2.99
NKIRAS2-213	ENST00000587028	FAM9B	Q8IZU0	186 aa		33.73	■■■□□ 2.99
NKIRAS2-213	ENST00000587028	KCP	Q6ZWJ8	1503 aa		33.73	■■■□□ 2.99
NKIRAS2-213	ENST00000587028	C4B	P0C0L5	1744 aa		33.72	■■■□□ 2.99
NKIRAS2-213	ENST00000587028	LINC00116	Q8NCU8	138 aa		33.7	■■■□□ 2.99
NKIRAS2-213	ENST00000587028	TRIM35	Q9UPQ4	493 aa		33.7	■■■□□ 2.99
NKIRAS2-213	ENST00000587028	CIC	Q96RK0	1608 aa	Predicted RBP	33.69	■■■□□ 2.98
NKIRAS2-213	ENST00000587028	COL5A3	P25940	1745 aa	Predicted RBP	33.69	■■■□□ 2.98
NKIRAS2-213	ENST00000587028	TJP1	Q07157	1748 aa		33.69	■■■□□ 2.98
NKIRAS2-213	ENST00000587028	QSER1	Q2KHR3	1735 aa		33.69	■■■□□ 2.98
NKIRAS2-213	ENST00000587028	TUBGCP6	Q96RT7	1819 aa		33.69	■■■□□ 2.98
NKIRAS2-213	ENST00000587028	TFCP2L1	Q9NZI6	479 aa		33.67	■■■□□ 2.98
NKIRAS2-213	ENST00000587028	KCNQ3	O43525	872 aa		33.65	■■■□□ 2.98
NKIRAS2-213	ENST00000587028	VSIG10	Q8N0Z9	540 aa		33.65	■■■□□ 2.98
NKIRAS2-213	ENST00000587028	MIER1	Q8N108	512 aa		33.65	■■■□□ 2.98
NKIRAS2-213	ENST00000587028	ZNF496	Q96IT1	587 aa	Predicted RBP	33.65	■■■□□ 2.98
NKIRAS2-213	ENST00000587028	AK7	Q96M32	723 aa		33.65	■■■□□ 2.98
NKIRAS2-213	ENST00000587028	KDM3B	Q7LBC6	1761 aa		33.65	■■■□□ 2.98
NKIRAS2-213	ENST00000587028	FMNL2	Q96PY5	1086 aa		33.64	■■■□□ 2.98
NKIRAS2-213	ENST00000587028	MIS18A	Q9NYP9	233 aa		33.64	■■■□□ 2.98
NKIRAS2-213	ENST00000587028	CASZ1	Q86V15	1759 aa		33.62	■■■□□ 2.97
NKIRAS2-213	ENST00000587028	DNAJC10	Q8IXB1	793 aa		33.62	■■■□□ 2.97
NKIRAS2-213	ENST00000587028	UBR3	Q6ZT12	1888 aa		33.62	■■■□□ 2.97
NKIRAS2-213	ENST00000587028	HEG1	Q9ULI3	1381 aa		33.61	■■■□□ 2.97
NKIRAS2-213	ENST00000587028	RC3H1	Q5TC82	1133 aa	Known RBP	33.6	■■■□□ 2.97
NKIRAS2-213	ENST00000587028	MYH14	Q7Z406	1995 aa	Known RBP	33.6	■■■□□ 2.97
NKIRAS2-213	ENST00000587028	CNTNAP4	Q9C0A0	1308 aa		33.59	■■■□□ 2.97
NKIRAS2-213	ENST00000587028	PNPLA7	Q6ZV29	1317 aa		33.58	■■■□□ 2.97
NKIRAS2-213	ENST00000587028	BABAM1	Q9NWV8	329 aa		33.58	■■■□□ 2.97
NKIRAS2-213	ENST00000587028	GNPAT	O15228	680 aa		33.57	■■■□□ 2.96
NKIRAS2-213	ENST00000587028	PDGFD	Q9GZP0	370 aa	Predicted RBP	33.57	■■■□□ 2.96
NKIRAS2-213	ENST00000587028	TSPYL4	Q9UJ04	414 aa		33.57	■■■□□ 2.96
NKIRAS2-213	ENST00000587028	SENP3-EIF4A1	A0A087X0R7	540 aa		33.56	■■■□□ 2.96
NKIRAS2-213	ENST00000587028	CRKL	P46109	303 aa	Known RBP	33.56	■■■□□ 2.96
NKIRAS2-213	ENST00000587028	TEX13A	Q9BXU3	409 aa	Predicted RBP	33.56	■■■□□ 2.96
NKIRAS2-213	ENST00000587028	CYP19A1	P11511	503 aa	Predicted RBP	33.55	■■■□□ 2.96
NKIRAS2-213	ENST00000587028	NCBP3	Q53F19	620 aa	Known RBP	33.55	■■■□□ 2.96
NKIRAS2-213	ENST00000587028	FLAD1	Q8NFF5	587 aa		33.55	■■■□□ 2.96
NKIRAS2-213	ENST00000587028	CALD1	Q05682	793 aa	Known RBP	33.54	■■■□□ 2.96
NKIRAS2-213	ENST00000587028	CCDC27	Q2M243	656 aa		33.54	■■■□□ 2.96
NKIRAS2-213	ENST00000587028	LAS1L	Q9Y4W2	734 aa	Known RBP	33.53	■■■□□ 2.96
NKIRAS2-213	ENST00000587028	STARD3NL	O95772	234 aa		33.52	■■■□□ 2.96
NKIRAS2-213	ENST00000587028	SNRPA1	P09661	255 aa	Known RBP	33.52	■■■□□ 2.96
NKIRAS2-213	ENST00000587028	SSFA2	P28290	1259 aa		33.52	■■■□□ 2.96
NKIRAS2-213	ENST00000587028	COL23A1	Q86Y22	540 aa	Predicted RBP	33.52	■■■□□ 2.96
NKIRAS2-213	ENST00000587028	RTCB	Q9Y3I0	505 aa	Known RBP	33.52	■■■□□ 2.96
NKIRAS2-213	ENST00000587028	CHL1	O00533	1208 aa		33.51	■■■□□ 2.95
NKIRAS2-213	ENST00000587028	MSH5	O43196	834 aa		33.51	■■■□□ 2.95
NKIRAS2-213	ENST00000587028	RPS6KA4	O75676	772 aa		33.51	■■■□□ 2.95
NKIRAS2-213	ENST00000587028	PHF14	O94880	888 aa		33.51	■■■□□ 2.95
NKIRAS2-213	ENST00000587028	EIF4A1	P60842	406 aa	Known RBP	33.51	■■■□□ 2.95
NKIRAS2-213	ENST00000587028	AMIGO3	Q86WK7	504 aa		33.51	■■■□□ 2.95
NKIRAS2-213	ENST00000587028	CCDC87	Q9NVE4	849 aa		33.51	■■■□□ 2.95
NKIRAS2-213	ENST00000587028	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	33.5	■■■□□ 2.95

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms