RNA–Protein interactions for RNA: ENST00000586667.1

DNMT1-208, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-208ENST00000586667 ZNF853P0CG23 659 aa16.52■□□□□ 0.24
DNMT1-208ENST00000586667 ACSBG1Q96GR2 724 aa16.52■□□□□ 0.24
DNMT1-208ENST00000586667 RGPD3A6NKT7 1758 aaPredicted RBP16.51■□□□□ 0.23
DNMT1-208ENST00000586667 RGPD4Q7Z3J3 1758 aa16.51■□□□□ 0.23
DNMT1-208ENST00000586667 IL16Q14005 1332 aa16.51■□□□□ 0.23
DNMT1-208ENST00000586667 FAM196AQ6ZSG2 479 aa16.51■□□□□ 0.23
DNMT1-208ENST00000586667 PIGBQ92521 554 aa16.51■□□□□ 0.23
DNMT1-208ENST00000586667 LY75O60449 1722 aa16.5■□□□□ 0.23
DNMT1-208ENST00000586667 C5P01031 1676 aa16.5■□□□□ 0.23
DNMT1-208ENST00000586667 PRIM1P49642 420 aaKnown RBP16.5■□□□□ 0.23
DNMT1-208ENST00000586667 TJP1Q07157 1748 aa16.49■□□□□ 0.23
DNMT1-208ENST00000586667 WDR63Q8IWG1 891 aa16.49■□□□□ 0.23
DNMT1-208ENST00000586667 NFATC2IPQ8NCF5 419 aa16.49■□□□□ 0.23
DNMT1-208ENST00000586667 YTHDC1Q96MU7 727 aaKnown RBP16.49■□□□□ 0.23
DNMT1-208ENST00000586667 ZNF831Q5JPB2 1677 aa16.49■□□□□ 0.23
DNMT1-208ENST00000586667 CHL1O00533 1208 aa16.48■□□□□ 0.23
DNMT1-208ENST00000586667 CABP4P57796 275 aa16.48■□□□□ 0.23
DNMT1-208ENST00000586667 TEFQ10587 303 aa16.48■□□□□ 0.23
DNMT1-208ENST00000586667 IFT57Q9NWB7 429 aa16.48■□□□□ 0.23
DNMT1-208ENST00000586667 TMOD3Q9NYL9 352 aa16.48■□□□□ 0.23
DNMT1-208ENST00000586667 FANCIQ9NVI1 1328 aa16.47■□□□□ 0.23
DNMT1-208ENST00000586667 CDCA7LQ96GN5 454 aa16.47■□□□□ 0.23
DNMT1-208ENST00000586667 CFAP44Q96MT7 982 aa16.47■□□□□ 0.23
DNMT1-208ENST00000586667 LAMB4A4D0S4 1761 aa16.46■□□□□ 0.23
DNMT1-208ENST00000586667 KCNQ3O43525 872 aa16.46■□□□□ 0.23
DNMT1-208ENST00000586667 CALD1Q05682 793 aaKnown RBP16.46■□□□□ 0.23
DNMT1-208ENST00000586667 TAF7Q15545 349 aaPredicted RBP16.46■□□□□ 0.23
DNMT1-208ENST00000586667 ILDR2Q71H61 639 aa16.46■□□□□ 0.23
DNMT1-208ENST00000586667 SYTL4Q96C24 671 aaPredicted RBP16.46■□□□□ 0.23
DNMT1-208ENST00000586667 BCL11BQ9C0K0 894 aaPredicted RBP16.46■□□□□ 0.23
DNMT1-208ENST00000586667 MBIPQ9NS73 344 aa16.46■□□□□ 0.23
DNMT1-208ENST00000586667 ATG3Q9NT62 314 aa16.46■□□□□ 0.23
DNMT1-208ENST00000586667 MIS18AQ9NYP9 233 aa16.46■□□□□ 0.23
DNMT1-208ENST00000586667 HEG1Q9ULI3 1381 aa16.46■□□□□ 0.23
DNMT1-208ENST00000586667 TRIM37O94972 964 aa16.45■□□□□ 0.22
DNMT1-208ENST00000586667 SLC39A6Q13433 755 aa16.45■□□□□ 0.22
DNMT1-208ENST00000586667 TRMT2AQ8IZ69 625 aaKnown RBP16.45■□□□□ 0.22
DNMT1-208ENST00000586667 TSR2Q969E8 191 aaKnown RBP16.45■□□□□ 0.22
DNMT1-208ENST00000586667 ASAP1Q9ULH1 1129 aa16.45■□□□□ 0.22
DNMT1-208ENST00000586667 KAT6BQ8WYB5 2073 aa16.45■□□□□ 0.22
DNMT1-208ENST00000586667 COL5A3P25940 1745 aaPredicted RBP16.45■□□□□ 0.22
DNMT1-208ENST00000586667 PALLDQ8WX93 1383 aa16.44■□□□□ 0.22
DNMT1-208ENST00000586667 GOLGA2Q08379 1002 aa16.44■□□□□ 0.22
DNMT1-208ENST00000586667 SLFN5Q08AF3 891 aa16.44■□□□□ 0.22
DNMT1-208ENST00000586667 BABAM1Q9NWV8 329 aa16.44■□□□□ 0.22
DNMT1-208ENST00000586667 RREB1Q92766 1687 aa16.43■□□□□ 0.22
DNMT1-208ENST00000586667 BTBD11A6QL63 1104 aa16.43■□□□□ 0.22
DNMT1-208ENST00000586667 GNAI1P63096 354 aa16.43■□□□□ 0.22
DNMT1-208ENST00000586667 ZNF790Q6PG37 636 aa16.43■□□□□ 0.22
DNMT1-208ENST00000586667 TSPYL4Q9UJ04 414 aa16.43■□□□□ 0.22
DNMT1-208ENST00000586667 E9PSI1 815 aa16.42■□□□□ 0.22
DNMT1-208ENST00000586667 DUSP27Q5VZP5 1158 aa16.42■□□□□ 0.22
DNMT1-208ENST00000586667 SLC4A9Q96Q91 983 aa16.42■□□□□ 0.22
DNMT1-208ENST00000586667 TAF1LQ8IZX4 1826 aa16.41■□□□□ 0.22
DNMT1-208ENST00000586667 KRT24Q2M2I5 525 aa16.41■□□□□ 0.22
DNMT1-208ENST00000586667 ZNF496Q96IT1 587 aaPredicted RBP16.41■□□□□ 0.22
DNMT1-208ENST00000586667 EIF4A1P60842 406 aaKnown RBP16.4■□□□□ 0.22
DNMT1-208ENST00000586667 LAS1LQ9Y4W2 734 aaKnown RBP16.4■□□□□ 0.22
DNMT1-208ENST00000586667 NUP188Q5SRE5 1749 aa16.39■□□□□ 0.21
DNMT1-208ENST00000586667 MYH16Q9H6N6 1097 aa16.39■□□□□ 0.21
DNMT1-208ENST00000586667 PRAMEF22A3QJZ6 481 aa16.37■□□□□ 0.21
DNMT1-208ENST00000586667 C8orf58Q8NAV2 365 aa16.37■□□□□ 0.21
DNMT1-208ENST00000586667 LOC102724428A0A0B4J2F2 783 aa16.36■□□□□ 0.21
DNMT1-208ENST00000586667 PTCD1O75127 700 aaKnown RBP16.36■□□□□ 0.21
DNMT1-208ENST00000586667 SIK1P57059 783 aa16.36■□□□□ 0.21
DNMT1-208ENST00000586667 ITPK1Q13572 414 aa16.36■□□□□ 0.21
DNMT1-208ENST00000586667 TTC5Q8N0Z6 440 aa16.36■□□□□ 0.21
DNMT1-208ENST00000586667 TSPYL6Q8N831 410 aa16.36■□□□□ 0.21
DNMT1-208ENST00000586667 SMARCC1Q92922 1105 aaPredicted RBP16.36■□□□□ 0.21
DNMT1-208ENST00000586667 C4BP0C0L5 1744 aa16.36■□□□□ 0.21
DNMT1-208ENST00000586667 GIGYF1O75420 1035 aaPredicted RBP16.35■□□□□ 0.21
DNMT1-208ENST00000586667 EXOSC9Q06265 439 aaKnown RBP16.35■□□□□ 0.21
DNMT1-208ENST00000586667 PROM2Q8N271 834 aa16.35■□□□□ 0.21
DNMT1-208ENST00000586667 FMNL2Q96PY5 1086 aa16.35■□□□□ 0.21
DNMT1-208ENST00000586667 MYH14Q7Z406 1995 aaKnown RBP16.35■□□□□ 0.21
DNMT1-208ENST00000586667 PLSCR1O15162 318 aa16.34■□□□□ 0.21
DNMT1-208ENST00000586667 APBA3O96018 575 aa16.34■□□□□ 0.21
DNMT1-208ENST00000586667 VSIG10Q8N0Z9 540 aa16.34■□□□□ 0.21
DNMT1-208ENST00000586667 UPF1Q92900 1129 aaKnown RBP eCLIP16.34■□□□□ 0.21
DNMT1-208ENST00000586667 LRRC4BQ9NT99 713 aa16.34■□□□□ 0.21
DNMT1-208ENST00000586667 KCNQ4P56696 695 aa16.33■□□□□ 0.2
DNMT1-208ENST00000586667 CAMKK2Q96RR4 588 aa16.33■□□□□ 0.2
DNMT1-208ENST00000586667 TUBGCP6Q96RT7 1819 aa16.33■□□□□ 0.2
DNMT1-208ENST00000586667 HOXB7P09629 217 aa16.32■□□□□ 0.2
DNMT1-208ENST00000586667 DNAJC10Q8IXB1 793 aa16.32■□□□□ 0.2
DNMT1-208ENST00000586667 DEFB132Q7Z7B7 95 aa16.31■□□□□ 0.2
DNMT1-208ENST00000586667 LINC00116Q8NCU8 138 aa16.31■□□□□ 0.2
DNMT1-208ENST00000586667 RBM42Q9BTD8 480 aaKnown RBP16.31■□□□□ 0.2
DNMT1-208ENST00000586667 CCNL1Q9UK58 526 aaPredicted RBP16.31■□□□□ 0.2
DNMT1-208ENST00000586667 UBR3Q6ZT12 1888 aa16.31■□□□□ 0.2
DNMT1-208ENST00000586667 SOS1Q07889 1333 aaPredicted RBP16.3■□□□□ 0.2
DNMT1-208ENST00000586667 VAMP4O75379 141 aa16.3■□□□□ 0.2
DNMT1-208ENST00000586667 SNRPA1P09661 255 aaKnown RBP16.3■□□□□ 0.2
DNMT1-208ENST00000586667 TXNRD1Q16881 649 aa16.3■□□□□ 0.2
DNMT1-208ENST00000586667 TWISTNBQ3B726 338 aaPredicted RBP16.3■□□□□ 0.2
DNMT1-208ENST00000586667 ELL2O00472 640 aaPredicted RBP16.29■□□□□ 0.2
DNMT1-208ENST00000586667 CYP19A1P11511 503 aaPredicted RBP16.29■□□□□ 0.2
DNMT1-208ENST00000586667 ATP6V1AP38606 617 aa16.29■□□□□ 0.2
DNMT1-208ENST00000586667 EN1Q05925 392 aaPredicted RBP16.29■□□□□ 0.2
DNMT1-208ENST00000586667 SLC27A3Q5K4L6 730 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms