RNA–Protein interactions for RNA: ENST00000586177.1

AP3D1-204, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-204ENST00000586177 RRP7AQ9Y3A4 280 aaKnown RBP22.49■■□□□ 1.19
AP3D1-204ENST00000586177 BTAF1O14981 1849 aa22.47■■□□□ 1.19
AP3D1-204ENST00000586177 SLC27A3Q5K4L6 730 aa22.47■■□□□ 1.19
AP3D1-204ENST00000586177 PALLDQ8WX93 1383 aa22.47■■□□□ 1.19
AP3D1-204ENST00000586177 APAF1O14727 1248 aa22.46■■□□□ 1.19
AP3D1-204ENST00000586177 CEMIPQ8WUJ3 1361 aa22.46■■□□□ 1.19
AP3D1-204ENST00000586177 CCNL1Q9UK58 526 aaPredicted RBP22.45■■□□□ 1.18
AP3D1-204ENST00000586177 ITGB4P16144 1822 aa22.44■■□□□ 1.18
AP3D1-204ENST00000586177 KCNQ4P56696 695 aa22.44■■□□□ 1.18
AP3D1-204ENST00000586177 LMOD3Q0VAK6 560 aa22.44■■□□□ 1.18
AP3D1-204ENST00000586177 NBPF14Q5TI25 921 aa22.44■■□□□ 1.18
AP3D1-204ENST00000586177 LRRC4BQ9NT99 713 aa22.44■■□□□ 1.18
AP3D1-204ENST00000586177 RBM42Q9BTD8 480 aaKnown RBP22.43■■□□□ 1.18
AP3D1-204ENST00000586177 SCN11AQ9UI33 1791 aa22.43■■□□□ 1.18
AP3D1-204ENST00000586177 LOC102724428A0A0B4J2F2 783 aa22.42■■□□□ 1.18
AP3D1-204ENST00000586177 SIK1P57059 783 aa22.42■■□□□ 1.18
AP3D1-204ENST00000586177 SLC39A6Q13433 755 aa22.42■■□□□ 1.18
AP3D1-204ENST00000586177 THUMPD2Q9BTF0 503 aaKnown RBP22.42■■□□□ 1.18
AP3D1-204ENST00000586177 BTBD11A6QL63 1104 aa22.41■■□□□ 1.18
AP3D1-204ENST00000586177 PTCD1O75127 700 aaKnown RBP22.41■■□□□ 1.18
AP3D1-204ENST00000586177 TAF7Q15545 349 aaPredicted RBP22.41■■□□□ 1.18
AP3D1-204ENST00000586177 ADAMTS7Q9UKP4 1686 aa22.41■■□□□ 1.18
AP3D1-204ENST00000586177 MRC1P22897 1456 aa22.41■■□□□ 1.18
AP3D1-204ENST00000586177 ATP6V1AP38606 617 aa22.4■■□□□ 1.18
AP3D1-204ENST00000586177 TRIM35Q9UPQ4 493 aa22.4■■□□□ 1.18
AP3D1-204ENST00000586177 HMGB2P26583 209 aaKnown RBP22.39■■□□□ 1.17
AP3D1-204ENST00000586177 TTC5Q8N0Z6 440 aa22.39■■□□□ 1.17
AP3D1-204ENST00000586177 RGPD3A6NKT7 1758 aaPredicted RBP22.39■■□□□ 1.17
AP3D1-204ENST00000586177 RGPD4Q7Z3J3 1758 aa22.39■■□□□ 1.17
AP3D1-204ENST00000586177 SENP3-EIF4A1A0A087X0R7 540 aa22.37■■□□□ 1.17
AP3D1-204ENST00000586177 ZNF790Q6PG37 636 aa22.37■■□□□ 1.17
AP3D1-204ENST00000586177 STK32BQ9NY57 414 aa22.37■■□□□ 1.17
AP3D1-204ENST00000586177 SLC4A9Q96Q91 983 aa22.36■■□□□ 1.17
AP3D1-204ENST00000586177 MIS18AQ9NYP9 233 aa22.36■■□□□ 1.17
AP3D1-204ENST00000586177 ITPK1Q13572 414 aa22.35■■□□□ 1.17
AP3D1-204ENST00000586177 ANO8Q9HCE9 1232 aaPredicted RBP22.35■■□□□ 1.17
AP3D1-204ENST00000586177 RREB1Q92766 1687 aa22.34■■□□□ 1.17
AP3D1-204ENST00000586177 KCNQ3O43525 872 aa22.34■■□□□ 1.17
AP3D1-204ENST00000586177 R3HDM1Q15032 1099 aaKnown RBP22.34■■□□□ 1.17
AP3D1-204ENST00000586177 SLC15A2Q16348 729 aa22.34■■□□□ 1.17
AP3D1-204ENST00000586177 PSDA5PKW4 1024 aaPredicted RBP22.33■■□□□ 1.17
AP3D1-204ENST00000586177 ZNF496Q96IT1 587 aaPredicted RBP22.33■■□□□ 1.17
AP3D1-204ENST00000586177 LY75O60449 1722 aa22.33■■□□□ 1.17
AP3D1-204ENST00000586177 DLG5Q8TDM6 1919 aa22.32■■□□□ 1.16
AP3D1-204ENST00000586177 LINC00116Q8NCU8 138 aa22.32■■□□□ 1.16
AP3D1-204ENST00000586177 AKT1S1Q96B36 256 aa22.32■■□□□ 1.16
AP3D1-204ENST00000586177 FMNL2Q96PY5 1086 aa22.32■■□□□ 1.16
AP3D1-204ENST00000586177 ZNF827Q17R98 1081 aa22.31■■□□□ 1.16
AP3D1-204ENST00000586177 NCBP3Q53F19 620 aaKnown RBP22.31■■□□□ 1.16
AP3D1-204ENST00000586177 VSIG10Q8N0Z9 540 aa22.31■■□□□ 1.16
AP3D1-204ENST00000586177 SALL2Q9Y467 1007 aaPredicted RBP22.31■■□□□ 1.16
AP3D1-204ENST00000586177 NUP188Q5SRE5 1749 aa22.31■■□□□ 1.16
AP3D1-204ENST00000586177 CALD1Q05682 793 aaKnown RBP22.3■■□□□ 1.16
AP3D1-204ENST00000586177 CCDC27Q2M243 656 aa22.3■■□□□ 1.16
AP3D1-204ENST00000586177 BABAM1Q9NWV8 329 aa22.3■■□□□ 1.16
AP3D1-204ENST00000586177 TFCP2L1Q9NZI6 479 aa22.3■■□□□ 1.16
AP3D1-204ENST00000586177 TSPYL4Q9UJ04 414 aa22.3■■□□□ 1.16
AP3D1-204ENST00000586177 LAS1LQ9Y4W2 734 aaKnown RBP22.3■■□□□ 1.16
AP3D1-204ENST00000586177 VIRMAQ69YN4 1812 aaKnown RBP22.29■■□□□ 1.16
AP3D1-204ENST00000586177 DNAJC10Q8IXB1 793 aa22.29■■□□□ 1.16
AP3D1-204ENST00000586177 WWC1Q8IX03 1113 aa22.28■■□□□ 1.16
AP3D1-204ENST00000586177 AK7Q96M32 723 aa22.28■■□□□ 1.16
AP3D1-204ENST00000586177 CHL1O00533 1208 aa22.27■■□□□ 1.16
AP3D1-204ENST00000586177 NGEFQ8N5V2 710 aa22.27■■□□□ 1.16
AP3D1-204ENST00000586177 TEX13AQ9BXU3 409 aaPredicted RBP22.27■■□□□ 1.16
AP3D1-204ENST00000586177 SIPA1L3O60292 1781 aaPredicted RBP22.27■■□□□ 1.16
AP3D1-204ENST00000586177 KCPQ6ZWJ8 1503 aa22.26■■□□□ 1.15
AP3D1-204ENST00000586177 HEG1Q9ULI3 1381 aa22.26■■□□□ 1.15
AP3D1-204ENST00000586177 RC3H1Q5TC82 1133 aaKnown RBP22.26■■□□□ 1.15
AP3D1-204ENST00000586177 CFAP44Q96MT7 982 aa22.26■■□□□ 1.15
AP3D1-204ENST00000586177 PAPPAQ13219 1627 aa22.25■■□□□ 1.15
AP3D1-204ENST00000586177 SNRPA1P09661 255 aaKnown RBP22.25■■□□□ 1.15
AP3D1-204ENST00000586177 EIF4A1P60842 406 aaKnown RBP22.25■■□□□ 1.15
AP3D1-204ENST00000586177 STARD3NLO95772 234 aa22.24■■□□□ 1.15
AP3D1-204ENST00000586177 CYP19A1P11511 503 aaPredicted RBP22.24■■□□□ 1.15
AP3D1-204ENST00000586177 CRKLP46109 303 aaKnown RBP22.24■■□□□ 1.15
AP3D1-204ENST00000586177 GNPATO15228 680 aa22.23■■□□□ 1.15
AP3D1-204ENST00000586177 GNAI1P63096 354 aa22.23■■□□□ 1.15
AP3D1-204ENST00000586177 IFT57Q9NWB7 429 aa22.23■■□□□ 1.15
AP3D1-204ENST00000586177 CNTNAP4Q9C0A0 1308 aa22.23■■□□□ 1.15
AP3D1-204ENST00000586177 ZNF853P0CG23 659 aa22.22■■□□□ 1.15
AP3D1-204ENST00000586177 PRAMEF22A3QJZ6 481 aa22.21■■□□□ 1.15
AP3D1-204ENST00000586177 MSH5O43196 834 aa22.21■■□□□ 1.15
AP3D1-204ENST00000586177 INTS5Q6P9B9 1019 aaKnown RBP22.21■■□□□ 1.15
AP3D1-204ENST00000586177 WDR63Q8IWG1 891 aa22.21■■□□□ 1.15
AP3D1-204ENST00000586177 FLAD1Q8NFF5 587 aa22.21■■□□□ 1.15
AP3D1-204ENST00000586177 PDGFDQ9GZP0 370 aaPredicted RBP22.21■■□□□ 1.15
AP3D1-204ENST00000586177 CCDC87Q9NVE4 849 aa22.21■■□□□ 1.15
AP3D1-204ENST00000586177 RTCBQ9Y3I0 505 aaKnown RBP22.21■■□□□ 1.15
AP3D1-204ENST00000586177 USP16Q9Y5T5 823 aa22.21■■□□□ 1.15
AP3D1-204ENST00000586177 PNPLA7Q6ZV29 1317 aa22.21■■□□□ 1.15
AP3D1-204ENST00000586177 C5P01031 1676 aa22.2■■□□□ 1.15
AP3D1-204ENST00000586177 ZNF831Q5JPB2 1677 aa22.2■■□□□ 1.15
AP3D1-204ENST00000586177 GIGYF1O75420 1035 aaPredicted RBP22.2■■□□□ 1.14
AP3D1-204ENST00000586177 RPS6KA4O75676 772 aa22.2■■□□□ 1.14
AP3D1-204ENST00000586177 PHF14O94880 888 aa22.2■■□□□ 1.14
AP3D1-204ENST00000586177 SMIM5Q71RC9 77 aa22.2■■□□□ 1.14
AP3D1-204ENST00000586177 MBIPQ9NS73 344 aa22.2■■□□□ 1.14
AP3D1-204ENST00000586177 C4BP0C0L5 1744 aa22.2■■□□□ 1.14
AP3D1-204ENST00000586177 AMIGO3Q86WK7 504 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms