RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 PRIM1P49642 420 aaKnown RBP17.66■□□□□ 0.42
CHAF1A-202ENST00000585371 NFE2L2Q16236 605 aa17.66■□□□□ 0.42
CHAF1A-202ENST00000585371 IL17REQ8NFR9 667 aa17.66■□□□□ 0.42
CHAF1A-202ENST00000585371 LY75O60449 1722 aa17.66■□□□□ 0.42
CHAF1A-202ENST00000585371 GNAT3A8MTJ3 354 aa17.65■□□□□ 0.42
CHAF1A-202ENST00000585371 TMPOP42166 694 aaKnown RBP17.65■□□□□ 0.42
CHAF1A-202ENST00000585371 PAPPAQ13219 1627 aa17.65■□□□□ 0.42
CHAF1A-202ENST00000585371 CEMIPQ8WUJ3 1361 aa17.65■□□□□ 0.42
CHAF1A-202ENST00000585371 ZBTB7AO95365 584 aa17.64■□□□□ 0.41
CHAF1A-202ENST00000585371 PDGFDQ9GZP0 370 aaPredicted RBP17.64■□□□□ 0.41
CHAF1A-202ENST00000585371 MAPK8IP3Q9UPT6 1336 aa17.64■□□□□ 0.41
CHAF1A-202ENST00000585371 ERVV-2B6SEH9 535 aa17.63■□□□□ 0.41
CHAF1A-202ENST00000585371 FAM9BQ8IZU0 186 aa17.63■□□□□ 0.41
CHAF1A-202ENST00000585371 HTATSF1O43719 755 aaKnown RBP17.62■□□□□ 0.41
CHAF1A-202ENST00000585371 PTGER2P43116 358 aa17.62■□□□□ 0.41
CHAF1A-202ENST00000585371 PIGBQ92521 554 aa17.62■□□□□ 0.41
CHAF1A-202ENST00000585371 MTFR1LQ9H019 292 aa17.62■□□□□ 0.41
CHAF1A-202ENST00000585371 APAF1O14727 1248 aa17.61■□□□□ 0.41
CHAF1A-202ENST00000585371 NEFMP07197 916 aa17.61■□□□□ 0.41
CHAF1A-202ENST00000585371 DCTN1Q14203 1278 aa17.61■□□□□ 0.41
CHAF1A-202ENST00000585371 ATF5Q9Y2D1 282 aaPredicted RBP17.61■□□□□ 0.41
CHAF1A-202ENST00000585371 RRP7AQ9Y3A4 280 aaKnown RBP17.61■□□□□ 0.41
CHAF1A-202ENST00000585371 UBR2Q8IWV8 1755 aa17.61■□□□□ 0.41
CHAF1A-202ENST00000585371 RIPK4P57078 832 aa17.6■□□□□ 0.41
CHAF1A-202ENST00000585371 TRIM35Q9UPQ4 493 aa17.6■□□□□ 0.41
CHAF1A-202ENST00000585371 MCM10Q7L590 875 aa17.59■□□□□ 0.41
CHAF1A-202ENST00000585371 NFATC2IPQ8NCF5 419 aa17.59■□□□□ 0.41
CHAF1A-202ENST00000585371 SYTL4Q96C24 671 aaPredicted RBP17.59■□□□□ 0.41
CHAF1A-202ENST00000585371 SLC52A2Q9HAB3 445 aa17.59■□□□□ 0.41
CHAF1A-202ENST00000585371 TMOD3Q9NYL9 352 aa17.58■□□□□ 0.4
CHAF1A-202ENST00000585371 TAF1LQ8IZX4 1826 aa17.58■□□□□ 0.4
CHAF1A-202ENST00000585371 KDM3BQ7LBC6 1761 aa17.58■□□□□ 0.4
CHAF1A-202ENST00000585371 QSER1Q2KHR3 1735 aa17.58■□□□□ 0.4
CHAF1A-202ENST00000585371 CABP4P57796 275 aa17.57■□□□□ 0.4
CHAF1A-202ENST00000585371 THUMPD2Q9BTF0 503 aaKnown RBP17.57■□□□□ 0.4
CHAF1A-202ENST00000585371 ZNF831Q5JPB2 1677 aa17.57■□□□□ 0.4
CHAF1A-202ENST00000585371 NEUROD2Q15784 382 aa17.56■□□□□ 0.4
CHAF1A-202ENST00000585371 SLC27A3Q5K4L6 730 aa17.56■□□□□ 0.4
CHAF1A-202ENST00000585371 SGIP1Q9BQI5 828 aa17.56■□□□□ 0.4
CHAF1A-202ENST00000585371 ATG3Q9NT62 314 aa17.56■□□□□ 0.4
CHAF1A-202ENST00000585371 ASAP1Q9ULH1 1129 aa17.56■□□□□ 0.4
CHAF1A-202ENST00000585371 CICQ96RK0 1608 aaPredicted RBP17.55■□□□□ 0.4
CHAF1A-202ENST00000585371 SENP3-EIF4A1A0A087X0R7 540 aa17.55■□□□□ 0.4
CHAF1A-202ENST00000585371 RTF1Q92541 710 aaKnown RBP17.55■□□□□ 0.4
CHAF1A-202ENST00000585371 SYT17Q9BSW7 474 aa17.55■□□□□ 0.4
CHAF1A-202ENST00000585371 FHDC1Q9C0D6 1143 aaPredicted RBP17.55■□□□□ 0.4
CHAF1A-202ENST00000585371 KCPQ6ZWJ8 1503 aa17.55■□□□□ 0.4
CHAF1A-202ENST00000585371 NCBP3Q53F19 620 aaKnown RBP17.54■□□□□ 0.4
CHAF1A-202ENST00000585371 PALLDQ8WX93 1383 aa17.53■□□□□ 0.4
CHAF1A-202ENST00000585371 TJP1Q07157 1748 aa17.53■□□□□ 0.4
CHAF1A-202ENST00000585371 TEFQ10587 303 aa17.53■□□□□ 0.4
CHAF1A-202ENST00000585371 ZNF827Q17R98 1081 aa17.53■□□□□ 0.4
CHAF1A-202ENST00000585371 ARXQ96QS3 562 aa17.53■□□□□ 0.4
CHAF1A-202ENST00000585371 LRRC4BQ9NT99 713 aa17.53■□□□□ 0.4
CHAF1A-202ENST00000585371 COL5A3P25940 1745 aaPredicted RBP17.52■□□□□ 0.4
CHAF1A-202ENST00000585371 C5P01031 1676 aa17.52■□□□□ 0.4
CHAF1A-202ENST00000585371 LMOD3Q0VAK6 560 aa17.52■□□□□ 0.4
CHAF1A-202ENST00000585371 SLC39A6Q13433 755 aa17.52■□□□□ 0.4
CHAF1A-202ENST00000585371 CCDC27Q2M243 656 aa17.52■□□□□ 0.4
CHAF1A-202ENST00000585371 SLC16A10Q8TF71 515 aa17.52■□□□□ 0.4
CHAF1A-202ENST00000585371 CHD4Q14839 1912 aa17.51■□□□□ 0.39
CHAF1A-202ENST00000585371 AKT1S1Q96B36 256 aa17.51■□□□□ 0.39
CHAF1A-202ENST00000585371 SLC4A9Q96Q91 983 aa17.51■□□□□ 0.39
CHAF1A-202ENST00000585371 COL24A1Q17RW2 1714 aa17.5■□□□□ 0.39
CHAF1A-202ENST00000585371 KCNQ3O43525 872 aa17.5■□□□□ 0.39
CHAF1A-202ENST00000585371 TAF7Q15545 349 aaPredicted RBP17.5■□□□□ 0.39
CHAF1A-202ENST00000585371 SMARCC1Q92922 1105 aaPredicted RBP17.5■□□□□ 0.39
CHAF1A-202ENST00000585371 TUBGCP6Q96RT7 1819 aa17.49■□□□□ 0.39
CHAF1A-202ENST00000585371 WWC1Q8IX03 1113 aa17.49■□□□□ 0.39
CHAF1A-202ENST00000585371 KCNQ4P56696 695 aa17.48■□□□□ 0.39
CHAF1A-202ENST00000585371 ZNF790Q6PG37 636 aa17.48■□□□□ 0.39
CHAF1A-202ENST00000585371 MIS18AQ9NYP9 233 aa17.48■□□□□ 0.39
CHAF1A-202ENST00000585371 MYH14Q7Z406 1995 aaKnown RBP17.48■□□□□ 0.39
CHAF1A-202ENST00000585371 ZNF521Q96K83 1311 aa17.47■□□□□ 0.39
CHAF1A-202ENST00000585371 LOC102724428A0A0B4J2F2 783 aa17.47■□□□□ 0.39
CHAF1A-202ENST00000585371 BTBD11A6QL63 1104 aa17.47■□□□□ 0.39
CHAF1A-202ENST00000585371 ZNF853P0CG23 659 aa17.47■□□□□ 0.39
CHAF1A-202ENST00000585371 POLD1P28340 1107 aa17.47■□□□□ 0.39
CHAF1A-202ENST00000585371 SIK1P57059 783 aa17.47■□□□□ 0.39
CHAF1A-202ENST00000585371 TFCP2L1Q9NZI6 479 aa17.47■□□□□ 0.39
CHAF1A-202ENST00000585371 CHL1O00533 1208 aa17.46■□□□□ 0.39
CHAF1A-202ENST00000585371 HMGB2P26583 209 aaKnown RBP17.46■□□□□ 0.39
CHAF1A-202ENST00000585371 ITPK1Q13572 414 aa17.46■□□□□ 0.39
CHAF1A-202ENST00000585371 NGEFQ8N5V2 710 aa17.46■□□□□ 0.39
CHAF1A-202ENST00000585371 SALL2Q9Y467 1007 aaPredicted RBP17.46■□□□□ 0.39
CHAF1A-202ENST00000585371 C4BP0C0L5 1744 aa17.46■□□□□ 0.39
CHAF1A-202ENST00000585371 PNPLA7Q6ZV29 1317 aa17.46■□□□□ 0.38
CHAF1A-202ENST00000585371 HEG1Q9ULI3 1381 aa17.45■□□□□ 0.38
CHAF1A-202ENST00000585371 ZNF496Q96IT1 587 aaPredicted RBP17.45■□□□□ 0.38
CHAF1A-202ENST00000585371 BABAM1Q9NWV8 329 aa17.45■□□□□ 0.38
CHAF1A-202ENST00000585371 CCNL1Q9UK58 526 aaPredicted RBP17.45■□□□□ 0.38
CHAF1A-202ENST00000585371 LAMB4A4D0S4 1761 aa17.45■□□□□ 0.38
CHAF1A-202ENST00000585371 UBR3Q6ZT12 1888 aa17.44■□□□□ 0.38
CHAF1A-202ENST00000585371 PTCD1O75127 700 aaKnown RBP17.44■□□□□ 0.38
CHAF1A-202ENST00000585371 RBM42Q9BTD8 480 aaKnown RBP17.44■□□□□ 0.38
CHAF1A-202ENST00000585371 CFAP44Q96MT7 982 aa17.43■□□□□ 0.38
CHAF1A-202ENST00000585371 ATP6V1AP38606 617 aa17.42■□□□□ 0.38
CHAF1A-202ENST00000585371 EIF4A1P60842 406 aaKnown RBP17.42■□□□□ 0.38
CHAF1A-202ENST00000585371 WDR63Q8IWG1 891 aa17.42■□□□□ 0.38
CHAF1A-202ENST00000585371 ZNF784Q8NCA9 323 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms