RNA–Protein interactions for RNA: ENST00000584911.1

LINC00473-205, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best) BASIC

Gene LINC00473, Length 2,212 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-205ENST00000584911 CHD1LQ86WJ1 897 aa14.72□□□□□ -0.05
LINC00473-205ENST00000584911 ITPRIPQ8IWB1 547 aa14.72□□□□□ -0.05
LINC00473-205ENST00000584911 RBM42Q9BTD8 480 aaKnown RBP14.72□□□□□ -0.05
LINC00473-205ENST00000584911 CCDC94Q9BW85 323 aaPredicted RBP14.72□□□□□ -0.05
LINC00473-205ENST00000584911 ACEP12821 1306 aa14.71□□□□□ -0.05
LINC00473-205ENST00000584911 CAVIN1Q6NZI2 390 aaKnown RBP14.71□□□□□ -0.05
LINC00473-205ENST00000584911 NRAPQ86VF7 1730 aa14.71□□□□□ -0.05
LINC00473-205ENST00000584911 PRIM1P49642 420 aaKnown RBP14.7□□□□□ -0.06
LINC00473-205ENST00000584911 LNPKQ9C0E8 428 aa14.7□□□□□ -0.06
LINC00473-205ENST00000584911 SMC4Q9NTJ3 1288 aa14.7□□□□□ -0.06
LINC00473-205ENST00000584911 COL14A1Q05707 1796 aaKnown RBP14.7□□□□□ -0.06
LINC00473-205ENST00000584911 SSH1Q8WYL5 1049 aa14.7□□□□□ -0.06
LINC00473-205ENST00000584911 ONECUT3O60422 494 aaPredicted RBP14.69□□□□□ -0.06
LINC00473-205ENST00000584911 NUCB2P80303 420 aa14.69□□□□□ -0.06
LINC00473-205ENST00000584911 MORC1Q86VD1 984 aa14.69□□□□□ -0.06
LINC00473-205ENST00000584911 SBNO2Q9Y2G9 1366 aa14.69□□□□□ -0.06
LINC00473-205ENST00000584911 NSD3Q9BZ95 1437 aa14.69□□□□□ -0.06
LINC00473-205ENST00000584911 MCTP1Q6DN14 999 aa14.69□□□□□ -0.06
LINC00473-205ENST00000584911 TBC1D9Q6ZT07 1266 aa14.69□□□□□ -0.06
LINC00473-205ENST00000584911 TMEM57Q8N5G2 664 aa14.69□□□□□ -0.06
LINC00473-205ENST00000584911 CCDC39Q9UFE4 941 aa14.69□□□□□ -0.06
LINC00473-205ENST00000584911 ZSCAN20P17040 1043 aaPredicted RBP14.68□□□□□ -0.06
LINC00473-205ENST00000584911 SRPK2P78362 688 aaKnown RBP14.68□□□□□ -0.06
LINC00473-205ENST00000584911 EXOSC9Q06265 439 aaKnown RBP14.68□□□□□ -0.06
LINC00473-205ENST00000584911 PHRF1Q9P1Y6 1649 aaKnown RBP14.68□□□□□ -0.06
LINC00473-205ENST00000584911 PPIP5K1Q6PFW1 1433 aa14.67□□□□□ -0.06
LINC00473-205ENST00000584911 BRWD3Q6RI45 1802 aa14.67□□□□□ -0.06
LINC00473-205ENST00000584911 TSR2Q969E8 191 aaKnown RBP14.67□□□□□ -0.06
LINC00473-205ENST00000584911 CABP2Q9NPB3 220 aa14.67□□□□□ -0.06
LINC00473-205ENST00000584911 BTG4Q9NY30 223 aa14.67□□□□□ -0.06
LINC00473-205ENST00000584911 NOB1Q9ULX3 412 aaKnown RBP14.67□□□□□ -0.06
LINC00473-205ENST00000584911 A0A0U1RQG5 324 aaPredicted RBP14.66□□□□□ -0.06
LINC00473-205ENST00000584911 PRDM10Q9NQV6 1147 aa14.66□□□□□ -0.06
LINC00473-205ENST00000584911 LRSAM1Q6UWE0 723 aa14.66□□□□□ -0.06
LINC00473-205ENST00000584911 GPT2Q8TD30 523 aa14.66□□□□□ -0.06
LINC00473-205ENST00000584911 ZHX1Q9UKY1 873 aaPredicted RBP14.66□□□□□ -0.06
LINC00473-205ENST00000584911 SEPT12Q8IYM1 358 aa14.65□□□□□ -0.06
LINC00473-205ENST00000584911 MYRIPQ8NFW9 859 aa14.65□□□□□ -0.06
LINC00473-205ENST00000584911 NCLP19338 710 aaKnown RBP14.65□□□□□ -0.06
LINC00473-205ENST00000584911 MTHFSP49914 203 aa14.65□□□□□ -0.06
LINC00473-205ENST00000584911 CCDC125Q86Z20 511 aa14.65□□□□□ -0.06
LINC00473-205ENST00000584911 RABEP1Q15276 862 aa14.64□□□□□ -0.07
LINC00473-205ENST00000584911 PRDM11Q9NQV5 511 aa14.64□□□□□ -0.07
LINC00473-205ENST00000584911 CCDC9Q9Y3X0 531 aaKnown RBP14.64□□□□□ -0.07
LINC00473-205ENST00000584911 KIAA0232Q92628 1395 aa14.64□□□□□ -0.07
LINC00473-205ENST00000584911 NUTM2GQ5VZR2 741 aa14.64□□□□□ -0.07
LINC00473-205ENST00000584911 GCC1Q96CN9 775 aa14.64□□□□□ -0.07
LINC00473-205ENST00000584911 CFAP53Q96M91 514 aa14.64□□□□□ -0.07
LINC00473-205ENST00000584911 RBM27Q9P2N5 1060 aaKnown RBP14.64□□□□□ -0.07
LINC00473-205ENST00000584911 EVC2Q86UK5 1308 aa14.63□□□□□ -0.07
LINC00473-205ENST00000584911 FGD1P98174 961 aa14.63□□□□□ -0.07
LINC00473-205ENST00000584911 ABTB2Q8N961 1025 aa14.63□□□□□ -0.07
LINC00473-205ENST00000584911 CABP1Q9NZU7 370 aa14.63□□□□□ -0.07
LINC00473-205ENST00000584911 EP400Q96L91 3159 aa14.63□□□□□ -0.07
LINC00473-205ENST00000584911 NRKQ7Z2Y5 1582 aa14.63□□□□□ -0.07
LINC00473-205ENST00000584911 TNNT2P45379 298 aaPredicted RBP14.62□□□□□ -0.07
LINC00473-205ENST00000584911 PKP1Q13835 747 aa14.62□□□□□ -0.07
LINC00473-205ENST00000584911 ARID3AQ99856 593 aa14.62□□□□□ -0.07
LINC00473-205ENST00000584911 CWC22Q9HCG8 908 aaKnown RBP14.62□□□□□ -0.07
LINC00473-205ENST00000584911 TMEM63CQ9P1W3 806 aa14.62□□□□□ -0.07
LINC00473-205ENST00000584911 SPATA31A5Q5VU36 1347 aa14.62□□□□□ -0.07
LINC00473-205ENST00000584911 SPATA31A7Q8IWB4 1347 aa14.62□□□□□ -0.07
LINC00473-205ENST00000584911 GTF2F1P35269 517 aaKnown RBP eCLIP14.62□□□□□ -0.07
LINC00473-205ENST00000584911 GTPBP4Q9BZE4 634 aaKnown RBP14.62□□□□□ -0.07
LINC00473-205ENST00000584911 IL16Q14005 1332 aa14.62□□□□□ -0.07
LINC00473-205ENST00000584911 USP6P35125 1406 aa14.62□□□□□ -0.07
LINC00473-205ENST00000584911 IPO8O15397 1037 aaKnown RBP14.61□□□□□ -0.07
LINC00473-205ENST00000584911 PRPF40AO75400 957 aaKnown RBP14.61□□□□□ -0.07
LINC00473-205ENST00000584911 CDC45O75419 566 aa14.61□□□□□ -0.07
LINC00473-205ENST00000584911 SSH2Q76I76 1423 aa14.61□□□□□ -0.07
LINC00473-205ENST00000584911 ZNF710Q8N1W2 664 aa14.61□□□□□ -0.07
LINC00473-205ENST00000584911 TRIM35Q9UPQ4 493 aa14.61□□□□□ -0.07
LINC00473-205ENST00000584911 CPDO75976 1380 aa14.61□□□□□ -0.07
LINC00473-205ENST00000584911 ZC3H6P61129 1189 aaKnown RBP14.61□□□□□ -0.07
LINC00473-205ENST00000584911 ANKRD45Q5TZF3 282 aa14.61□□□□□ -0.07
LINC00473-205ENST00000584911 PRIMPOLQ96LW4 560 aa14.61□□□□□ -0.07
LINC00473-205ENST00000584911 ZDHHC9Q9Y397 364 aa14.61□□□□□ -0.07
LINC00473-205ENST00000584911 KIAA2012Q0VF49 1180 aa14.6□□□□□ -0.07
LINC00473-205ENST00000584911 CHRNA2Q15822 529 aa14.6□□□□□ -0.07
LINC00473-205ENST00000584911 FAM98CQ17RN3 349 aaKnown RBP14.6□□□□□ -0.07
LINC00473-205ENST00000584911 U2AF1L5P0DN76 240 aaPredicted RBP14.6□□□□□ -0.07
LINC00473-205ENST00000584911 U2AF1Q01081 240 aaKnown RBP eCLIP14.6□□□□□ -0.07
LINC00473-205ENST00000584911 KRT27Q7Z3Y8 459 aa14.6□□□□□ -0.07
LINC00473-205ENST00000584911 PLEKHF1Q96S99 279 aa14.6□□□□□ -0.07
LINC00473-205ENST00000584911 THSD7AQ9UPZ6 1657 aa14.59□□□□□ -0.07
LINC00473-205ENST00000584911 SYCE3A1L190 88 aa14.59□□□□□ -0.07
LINC00473-205ENST00000584911 ALDH1L2Q3SY69 923 aa14.59□□□□□ -0.07
LINC00473-205ENST00000584911 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.59□□□□□ -0.07
LINC00473-205ENST00000584911 LMO7Q8WWI1 1683 aa14.59□□□□□ -0.07
LINC00473-205ENST00000584911 KIF20AO95235 890 aa14.58□□□□□ -0.07
LINC00473-205ENST00000584911 TMPOP42166 694 aaKnown RBP14.58□□□□□ -0.07
LINC00473-205ENST00000584911 BRPF1P55201 1214 aaPredicted RBP14.58□□□□□ -0.07
LINC00473-205ENST00000584911 HMGN5P82970 282 aaKnown RBP14.58□□□□□ -0.07
LINC00473-205ENST00000584911 SPATA31A1Q5TZJ5 1347 aa14.58□□□□□ -0.08
LINC00473-205ENST00000584911 ZBTB7BO15156 539 aaPredicted RBP14.58□□□□□ -0.08
LINC00473-205ENST00000584911 GCP02774 474 aa14.58□□□□□ -0.08
LINC00473-205ENST00000584911 SLC12A5Q9H2X9 1139 aa14.58□□□□□ -0.08
LINC00473-205ENST00000584911 NSFL1CQ9UNZ2 370 aaKnown RBP14.58□□□□□ -0.08
LINC00473-205ENST00000584911 CAMTA1Q9Y6Y1 1673 aa14.57□□□□□ -0.08
LINC00473-205ENST00000584911 AKAP12Q02952 1782 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms