RNA–Protein interactions for RNA: ENST00000584716.1

CDK5R1-202, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CDK5R1, Length 962 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-202ENST00000584716 BTBD11A6QL63 1104 aa16.16■□□□□ 0.18
CDK5R1-202ENST00000584716 CALD1Q05682 793 aaKnown RBP16.16■□□□□ 0.18
CDK5R1-202ENST00000584716 PTF1AQ7RTS3 328 aa16.16■□□□□ 0.18
CDK5R1-202ENST00000584716 PIGBQ92521 554 aa16.16■□□□□ 0.18
CDK5R1-202ENST00000584716 ZNF521Q96K83 1311 aa16.16■□□□□ 0.18
CDK5R1-202ENST00000584716 SIPA1L3O60292 1781 aaPredicted RBP16.15■□□□□ 0.18
CDK5R1-202ENST00000584716 TRIM37O94972 964 aa16.15■□□□□ 0.18
CDK5R1-202ENST00000584716 GOLGA2Q08379 1002 aa16.15■□□□□ 0.18
CDK5R1-202ENST00000584716 SLC39A6Q13433 755 aa16.15■□□□□ 0.18
CDK5R1-202ENST00000584716 CDCA7LQ96GN5 454 aa16.15■□□□□ 0.18
CDK5R1-202ENST00000584716 SPINK5Q9NQ38 1064 aaPredicted RBP16.15■□□□□ 0.18
CDK5R1-202ENST00000584716 ZBED9Q6R2W3 1325 aa16.15■□□□□ 0.18
CDK5R1-202ENST00000584716 TSPYL4Q9UJ04 414 aa16.14■□□□□ 0.17
CDK5R1-202ENST00000584716 KCNQ3O43525 872 aa16.13■□□□□ 0.17
CDK5R1-202ENST00000584716 GNAI1P63096 354 aa16.13■□□□□ 0.17
CDK5R1-202ENST00000584716 TSR2Q969E8 191 aaKnown RBP16.13■□□□□ 0.17
CDK5R1-202ENST00000584716 CFAP44Q96MT7 982 aa16.13■□□□□ 0.17
CDK5R1-202ENST00000584716 NHSQ6T4R5 1651 aa16.12■□□□□ 0.17
CDK5R1-202ENST00000584716 IFT57Q9NWB7 429 aa16.12■□□□□ 0.17
CDK5R1-202ENST00000584716 ASAP1Q9ULH1 1129 aa16.12■□□□□ 0.17
CDK5R1-202ENST00000584716 BCL9O00512 1426 aa16.11■□□□□ 0.17
CDK5R1-202ENST00000584716 MRC1P22897 1456 aa16.11■□□□□ 0.17
CDK5R1-202ENST00000584716 CHL1O00533 1208 aa16.11■□□□□ 0.17
CDK5R1-202ENST00000584716 ZNF853P0CG23 659 aa16.11■□□□□ 0.17
CDK5R1-202ENST00000584716 SLFN5Q08AF3 891 aa16.11■□□□□ 0.17
CDK5R1-202ENST00000584716 TTC5Q8N0Z6 440 aa16.11■□□□□ 0.17
CDK5R1-202ENST00000584716 BCL11BQ9C0K0 894 aaPredicted RBP16.11■□□□□ 0.17
CDK5R1-202ENST00000584716 MBIPQ9NS73 344 aa16.11■□□□□ 0.17
CDK5R1-202ENST00000584716 IL16Q14005 1332 aa16.11■□□□□ 0.17
CDK5R1-202ENST00000584716 BTAF1O14981 1849 aa16.1■□□□□ 0.17
CDK5R1-202ENST00000584716 ATG3Q9NT62 314 aa16.1■□□□□ 0.17
CDK5R1-202ENST00000584716 KDM3BQ7LBC6 1761 aa16.09■□□□□ 0.17
CDK5R1-202ENST00000584716 E9PSI1 815 aa16.09■□□□□ 0.17
CDK5R1-202ENST00000584716 PTCD1O75127 700 aaKnown RBP16.09■□□□□ 0.17
CDK5R1-202ENST00000584716 ZNF790Q6PG37 636 aa16.09■□□□□ 0.17
CDK5R1-202ENST00000584716 MYH16Q9H6N6 1097 aa16.09■□□□□ 0.17
CDK5R1-202ENST00000584716 RBM42Q9BTD8 480 aaKnown RBP16.08■□□□□ 0.16
CDK5R1-202ENST00000584716 FANCIQ9NVI1 1328 aa16.08■□□□□ 0.16
CDK5R1-202ENST00000584716 APBA3O96018 575 aa16.07■□□□□ 0.16
CDK5R1-202ENST00000584716 BABAM1Q9NWV8 329 aa16.07■□□□□ 0.16
CDK5R1-202ENST00000584716 PAPPAQ13219 1627 aa16.06■□□□□ 0.16
CDK5R1-202ENST00000584716 ELL2O00472 640 aaPredicted RBP16.06■□□□□ 0.16
CDK5R1-202ENST00000584716 EIF4A1P60842 406 aaKnown RBP16.06■□□□□ 0.16
CDK5R1-202ENST00000584716 EXOSC9Q06265 439 aaKnown RBP16.06■□□□□ 0.16
CDK5R1-202ENST00000584716 KRT24Q2M2I5 525 aa16.06■□□□□ 0.16
CDK5R1-202ENST00000584716 ZNF496Q96IT1 587 aaPredicted RBP16.06■□□□□ 0.16
CDK5R1-202ENST00000584716 TRMT2AQ8IZ69 625 aaKnown RBP16.05■□□□□ 0.16
CDK5R1-202ENST00000584716 SMARCC1Q92922 1105 aaPredicted RBP16.05■□□□□ 0.16
CDK5R1-202ENST00000584716 PALLDQ8WX93 1383 aa16.04■□□□□ 0.16
CDK5R1-202ENST00000584716 SF3B2Q13435 895 aaKnown RBP16.04■□□□□ 0.16
CDK5R1-202ENST00000584716 DUSP27Q5VZP5 1158 aa16.04■□□□□ 0.16
CDK5R1-202ENST00000584716 C8orf58Q8NAV2 365 aa16.04■□□□□ 0.16
CDK5R1-202ENST00000584716 FMNL2Q96PY5 1086 aa16.04■□□□□ 0.16
CDK5R1-202ENST00000584716 UBR2Q8IWV8 1755 aa16.03■□□□□ 0.16
CDK5R1-202ENST00000584716 TNS1Q9HBL0 1735 aaKnown RBP16.03■□□□□ 0.16
CDK5R1-202ENST00000584716 PRAMEF22A3QJZ6 481 aa16.03■□□□□ 0.16
CDK5R1-202ENST00000584716 KCNQ4P56696 695 aa16.03■□□□□ 0.16
CDK5R1-202ENST00000584716 KCPQ6ZWJ8 1503 aa16.03■□□□□ 0.16
CDK5R1-202ENST00000584716 ATP6V1AP38606 617 aa16.02■□□□□ 0.16
CDK5R1-202ENST00000584716 TSPYL6Q8N831 410 aa16.02■□□□□ 0.16
CDK5R1-202ENST00000584716 EP400Q96L91 3159 aa16.02■□□□□ 0.15
CDK5R1-202ENST00000584716 LOC102724428A0A0B4J2F2 783 aa16.01■□□□□ 0.15
CDK5R1-202ENST00000584716 SIK1P57059 783 aa16.01■□□□□ 0.15
CDK5R1-202ENST00000584716 NECTIN2Q92692 538 aa16.01■□□□□ 0.15
CDK5R1-202ENST00000584716 SLC4A9Q96Q91 983 aa16.01■□□□□ 0.15
CDK5R1-202ENST00000584716 HEG1Q9ULI3 1381 aa16■□□□□ 0.15
CDK5R1-202ENST00000584716 LY75O60449 1722 aa16■□□□□ 0.15
CDK5R1-202ENST00000584716 GIGYF1O75420 1035 aaPredicted RBP16■□□□□ 0.15
CDK5R1-202ENST00000584716 SNRPA1P09661 255 aaKnown RBP16■□□□□ 0.15
CDK5R1-202ENST00000584716 EIF2S2P20042 333 aaKnown RBP16■□□□□ 0.15
CDK5R1-202ENST00000584716 EN1Q05925 392 aaPredicted RBP16■□□□□ 0.15
CDK5R1-202ENST00000584716 TWISTNBQ3B726 338 aaPredicted RBP16■□□□□ 0.15
CDK5R1-202ENST00000584716 CCNL1Q9UK58 526 aaPredicted RBP16■□□□□ 0.15
CDK5R1-202ENST00000584716 C5P01031 1676 aa15.99■□□□□ 0.15
CDK5R1-202ENST00000584716 DEFB132Q7Z7B7 95 aa15.99■□□□□ 0.15
CDK5R1-202ENST00000584716 DNAJC10Q8IXB1 793 aa15.99■□□□□ 0.15
CDK5R1-202ENST00000584716 USP16Q9Y5T5 823 aa15.99■□□□□ 0.15
CDK5R1-202ENST00000584716 TCERG1O14776 1098 aaKnown RBP15.98■□□□□ 0.15
CDK5R1-202ENST00000584716 PLSCR1O15162 318 aa15.98■□□□□ 0.15
CDK5R1-202ENST00000584716 BAG6P46379 1132 aa15.98■□□□□ 0.15
CDK5R1-202ENST00000584716 ITPK1Q13572 414 aa15.98■□□□□ 0.15
CDK5R1-202ENST00000584716 EZH2Q15910 746 aaKnown RBP15.98■□□□□ 0.15
CDK5R1-202ENST00000584716 TXNRD1Q16881 649 aa15.98■□□□□ 0.15
CDK5R1-202ENST00000584716 CCDC125Q86Z20 511 aa15.98■□□□□ 0.15
CDK5R1-202ENST00000584716 UPF1Q92900 1129 aaKnown RBP eCLIP15.98■□□□□ 0.15
CDK5R1-202ENST00000584716 VAMP4O75379 141 aa15.97■□□□□ 0.15
CDK5R1-202ENST00000584716 VSIG10Q8N0Z9 540 aa15.97■□□□□ 0.15
CDK5R1-202ENST00000584716 PROM2Q8N271 834 aa15.97■□□□□ 0.15
CDK5R1-202ENST00000584716 TJP1Q07157 1748 aa15.97■□□□□ 0.15
CDK5R1-202ENST00000584716 LRRC4BQ9NT99 713 aa15.96■□□□□ 0.15
CDK5R1-202ENST00000584716 PIP4K2AP48426 406 aaPredicted RBP15.95■□□□□ 0.14
CDK5R1-202ENST00000584716 HDGFL1Q5TGJ6 251 aa15.95■□□□□ 0.14
CDK5R1-202ENST00000584716 LINC00116Q8NCU8 138 aa15.95■□□□□ 0.14
CDK5R1-202ENST00000584716 CAMKK2Q96RR4 588 aa15.95■□□□□ 0.14
CDK5R1-202ENST00000584716 TEX13AQ9BXU3 409 aaPredicted RBP15.95■□□□□ 0.14
CDK5R1-202ENST00000584716 STARD3NLO95772 234 aa15.94■□□□□ 0.14
CDK5R1-202ENST00000584716 A1BGP04217 495 aa15.94■□□□□ 0.14
CDK5R1-202ENST00000584716 CYP19A1P11511 503 aaPredicted RBP15.94■□□□□ 0.14
CDK5R1-202ENST00000584716 LAMB4A4D0S4 1761 aa15.94■□□□□ 0.14
CDK5R1-202ENST00000584716 TAF1LQ8IZX4 1826 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms