RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 TAF7Q15545 349 aaPredicted RBP23.87■■□□□ 1.41
RFFL-211ENST00000584541 FAM182BQ5T319 152 aa23.87■■□□□ 1.41
RFFL-211ENST00000584541 TMOD3Q9NYL9 352 aa23.87■■□□□ 1.41
RFFL-211ENST00000584541 LAS1LQ9Y4W2 734 aaKnown RBP23.87■■□□□ 1.41
RFFL-211ENST00000584541 NFATC2IPQ8NCF5 419 aa23.86■■□□□ 1.41
RFFL-211ENST00000584541 SYTL4Q96C24 671 aaPredicted RBP23.86■■□□□ 1.41
RFFL-211ENST00000584541 ACSBG1Q96GR2 724 aa23.86■■□□□ 1.41
RFFL-211ENST00000584541 IFT57Q9NWB7 429 aa23.86■■□□□ 1.41
RFFL-211ENST00000584541 CFAP44Q96MT7 982 aa23.85■■□□□ 1.41
RFFL-211ENST00000584541 PRIM1P49642 420 aaKnown RBP23.84■■□□□ 1.41
RFFL-211ENST00000584541 MYH16Q9H6N6 1097 aa23.84■■□□□ 1.41
RFFL-211ENST00000584541 BABAM1Q9NWV8 329 aa23.84■■□□□ 1.41
RFFL-211ENST00000584541 KDM3BQ7LBC6 1761 aa23.83■■□□□ 1.41
RFFL-211ENST00000584541 BTBD11A6QL63 1104 aa23.83■■□□□ 1.41
RFFL-211ENST00000584541 E9PSI1 815 aa23.83■■□□□ 1.41
RFFL-211ENST00000584541 TSPYL4Q9UJ04 414 aa23.82■■□□□ 1.4
RFFL-211ENST00000584541 BTAF1O14981 1849 aa23.8■■□□□ 1.4
RFFL-211ENST00000584541 CHL1O00533 1208 aa23.8■■□□□ 1.4
RFFL-211ENST00000584541 ZNF853P0CG23 659 aa23.8■■□□□ 1.4
RFFL-211ENST00000584541 SLFN5Q08AF3 891 aa23.8■■□□□ 1.4
RFFL-211ENST00000584541 PIGBQ92521 554 aa23.8■■□□□ 1.4
RFFL-211ENST00000584541 PAPPAQ13219 1627 aa23.8■■□□□ 1.4
RFFL-211ENST00000584541 CDCA7LQ96GN5 454 aa23.79■■□□□ 1.4
RFFL-211ENST00000584541 TTC5Q8N0Z6 440 aa23.78■■□□□ 1.4
RFFL-211ENST00000584541 MBIPQ9NS73 344 aa23.78■■□□□ 1.4
RFFL-211ENST00000584541 MIS18AQ9NYP9 233 aa23.78■■□□□ 1.4
RFFL-211ENST00000584541 KCNQ2O43526 872 aa23.77■■□□□ 1.4
RFFL-211ENST00000584541 SPINK5Q9NQ38 1064 aaPredicted RBP23.77■■□□□ 1.4
RFFL-211ENST00000584541 BCL11BQ9C0K0 894 aaPredicted RBP23.76■■□□□ 1.39
RFFL-211ENST00000584541 FANCIQ9NVI1 1328 aa23.76■■□□□ 1.39
RFFL-211ENST00000584541 UBR2Q8IWV8 1755 aa23.75■■□□□ 1.39
RFFL-211ENST00000584541 ZNF790Q6PG37 636 aa23.75■■□□□ 1.39
RFFL-211ENST00000584541 TSR2Q969E8 191 aaKnown RBP23.75■■□□□ 1.39
RFFL-211ENST00000584541 TRIM37O94972 964 aa23.74■■□□□ 1.39
RFFL-211ENST00000584541 SLC39A6Q13433 755 aa23.74■■□□□ 1.39
RFFL-211ENST00000584541 SMARCC1Q92922 1105 aaPredicted RBP23.74■■□□□ 1.39
RFFL-211ENST00000584541 TRMT2AQ8IZ69 625 aaKnown RBP23.73■■□□□ 1.39
RFFL-211ENST00000584541 ATG3Q9NT62 314 aa23.72■■□□□ 1.39
RFFL-211ENST00000584541 ASAP1Q9ULH1 1129 aa23.72■■□□□ 1.39
RFFL-211ENST00000584541 DUSP27Q5VZP5 1158 aa23.71■■□□□ 1.39
RFFL-211ENST00000584541 TNS1Q9HBL0 1735 aaKnown RBP23.7■■□□□ 1.39
RFFL-211ENST00000584541 KCNQ3O43525 872 aa23.7■■□□□ 1.38
RFFL-211ENST00000584541 FMNL2Q96PY5 1086 aa23.7■■□□□ 1.38
RFFL-211ENST00000584541 EIF4A1P60842 406 aaKnown RBP23.69■■□□□ 1.38
RFFL-211ENST00000584541 PTF1AQ7RTS3 328 aa23.69■■□□□ 1.38
RFFL-211ENST00000584541 KCPQ6ZWJ8 1503 aa23.69■■□□□ 1.38
RFFL-211ENST00000584541 PALLDQ8WX93 1383 aa23.68■■□□□ 1.38
RFFL-211ENST00000584541 LY75O60449 1722 aa23.67■■□□□ 1.38
RFFL-211ENST00000584541 PTCD1O75127 700 aaKnown RBP23.67■■□□□ 1.38
RFFL-211ENST00000584541 EXOSC9Q06265 439 aaKnown RBP23.67■■□□□ 1.38
RFFL-211ENST00000584541 RBM42Q9BTD8 480 aaKnown RBP23.67■■□□□ 1.38
RFFL-211ENST00000584541 ZNF496Q96IT1 587 aaPredicted RBP23.66■■□□□ 1.38
RFFL-211ENST00000584541 HEG1Q9ULI3 1381 aa23.65■■□□□ 1.38
RFFL-211ENST00000584541 SOS1Q07889 1333 aaPredicted RBP23.65■■□□□ 1.38
RFFL-211ENST00000584541 ZNF831Q5JPB2 1677 aa23.65■■□□□ 1.38
RFFL-211ENST00000584541 SF3B2Q13435 895 aaKnown RBP23.65■■□□□ 1.38
RFFL-211ENST00000584541 LAMB4A4D0S4 1761 aa23.65■■□□□ 1.38
RFFL-211ENST00000584541 C5P01031 1676 aa23.64■■□□□ 1.38
RFFL-211ENST00000584541 APBA3O96018 575 aa23.64■■□□□ 1.37
RFFL-211ENST00000584541 VSIG10Q8N0Z9 540 aa23.64■■□□□ 1.37
RFFL-211ENST00000584541 RGPD3A6NKT7 1758 aaPredicted RBP23.63■■□□□ 1.37
RFFL-211ENST00000584541 RGPD4Q7Z3J3 1758 aa23.63■■□□□ 1.37
RFFL-211ENST00000584541 SNRPA1P09661 255 aaKnown RBP23.63■■□□□ 1.37
RFFL-211ENST00000584541 TWISTNBQ3B726 338 aaPredicted RBP23.63■■□□□ 1.37
RFFL-211ENST00000584541 C8orf58Q8NAV2 365 aa23.63■■□□□ 1.37
RFFL-211ENST00000584541 ELL2O00472 640 aaPredicted RBP23.62■■□□□ 1.37
RFFL-211ENST00000584541 HOXB7P09629 217 aa23.62■■□□□ 1.37
RFFL-211ENST00000584541 CT47B1P0C2W7 299 aaPredicted RBP23.62■■□□□ 1.37
RFFL-211ENST00000584541 KRT24Q2M2I5 525 aa23.62■■□□□ 1.37
RFFL-211ENST00000584541 CHMP4AQ9BY43 222 aa23.62■■□□□ 1.37
RFFL-211ENST00000584541 LOC102724428A0A0B4J2F2 783 aa23.61■■□□□ 1.37
RFFL-211ENST00000584541 GIGYF1O75420 1035 aaPredicted RBP23.61■■□□□ 1.37
RFFL-211ENST00000584541 SIK1P57059 783 aa23.61■■□□□ 1.37
RFFL-211ENST00000584541 CCDC125Q86Z20 511 aa23.61■■□□□ 1.37
RFFL-211ENST00000584541 TEX13AQ9BXU3 409 aaPredicted RBP23.61■■□□□ 1.37
RFFL-211ENST00000584541 CICQ96RK0 1608 aaPredicted RBP23.61■■□□□ 1.37
RFFL-211ENST00000584541 TJP1Q07157 1748 aa23.6■■□□□ 1.37
RFFL-211ENST00000584541 PLSCR1O15162 318 aa23.6■■□□□ 1.37
RFFL-211ENST00000584541 TSPYL6Q8N831 410 aa23.6■■□□□ 1.37
RFFL-211ENST00000584541 ATP6V1AP38606 617 aa23.59■■□□□ 1.37
RFFL-211ENST00000584541 CENPBP07199 599 aaPredicted RBP23.58■■□□□ 1.37
RFFL-211ENST00000584541 HMGB2P26583 209 aaKnown RBP23.58■■□□□ 1.37
RFFL-211ENST00000584541 CCNL1Q9UK58 526 aaPredicted RBP23.58■■□□□ 1.37
RFFL-211ENST00000584541 EP400Q96L91 3159 aa23.57■■□□□ 1.36
RFFL-211ENST00000584541 TAF1LQ8IZX4 1826 aa23.57■■□□□ 1.36
RFFL-211ENST00000584541 VAMP4O75379 141 aa23.57■■□□□ 1.36
RFFL-211ENST00000584541 ZNF428Q96B54 188 aa23.57■■□□□ 1.36
RFFL-211ENST00000584541 COL5A3P25940 1745 aaPredicted RBP23.56■■□□□ 1.36
RFFL-211ENST00000584541 CACNA1FO60840 1977 aa23.56■■□□□ 1.36
RFFL-211ENST00000584541 BAG6P46379 1132 aa23.56■■□□□ 1.36
RFFL-211ENST00000584541 SLC27A3Q5K4L6 730 aa23.56■■□□□ 1.36
RFFL-211ENST00000584541 HDGFL1Q5TGJ6 251 aa23.56■■□□□ 1.36
RFFL-211ENST00000584541 STARD3NLO95772 234 aa23.55■■□□□ 1.36
RFFL-211ENST00000584541 EIF2S2P20042 333 aaKnown RBP23.55■■□□□ 1.36
RFFL-211ENST00000584541 CCDC30Q5VVM6 783 aa23.55■■□□□ 1.36
RFFL-211ENST00000584541 DNAJC10Q8IXB1 793 aa23.55■■□□□ 1.36
RFFL-211ENST00000584541 SLC4A9Q96Q91 983 aa23.55■■□□□ 1.36
RFFL-211ENST00000584541 PRAMEF22A3QJZ6 481 aa23.54■■□□□ 1.36
RFFL-211ENST00000584541 USP16Q9Y5T5 823 aa23.54■■□□□ 1.36
RFFL-211ENST00000584541 TXNRD1Q16881 649 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms