RNA–Protein interactions for RNA: ENST00000584439.1

CTC1-212, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-212ENST00000584439 RNF25Q96BH1 459 aaPredicted RBP9.1□□□□□ -0.95
CTC1-212ENST00000584439 ARID3AQ99856 593 aa9.1□□□□□ -0.95
CTC1-212ENST00000584439 ZMYND15Q9H091 742 aa9.1□□□□□ -0.95
CTC1-212ENST00000584439 CABP2Q9NPB3 220 aa9.1□□□□□ -0.95
CTC1-212ENST00000584439 MAP2P11137 1827 aaKnown RBP9.1□□□□□ -0.95
CTC1-212ENST00000584439 ARHGAP27Q6ZUM4 889 aa9.09□□□□□ -0.95
CTC1-212ENST00000584439 MIER1Q8N108 512 aa9.09□□□□□ -0.95
CTC1-212ENST00000584439 NLRP2Q9NX02 1062 aa9.09□□□□□ -0.95
CTC1-212ENST00000584439 FAM208AQ9UK61 1670 aaKnown RBP9.09□□□□□ -0.95
CTC1-212ENST00000584439 PDE4DIPQ5VU43 2346 aa9.09□□□□□ -0.95
CTC1-212ENST00000584439 A0A0G2JLW4 131 aa9.08□□□□□ -0.96
CTC1-212ENST00000584439 C9orf131Q5VYM1 1079 aa9.08□□□□□ -0.96
CTC1-212ENST00000584439 CABP1Q9NZU7 370 aa9.08□□□□□ -0.96
CTC1-212ENST00000584439 BCS1LQ9Y276 419 aa9.08□□□□□ -0.96
CTC1-212ENST00000584439 ANKRD36BQ8N2N9 1353 aa9.08□□□□□ -0.96
CTC1-212ENST00000584439 TIAM2Q8IVF5 1701 aa9.08□□□□□ -0.96
CTC1-212ENST00000584439 RSPH6AQ9H0K4 717 aa9.07□□□□□ -0.96
CTC1-212ENST00000584439 SLC24A3Q9HC58 644 aa9.07□□□□□ -0.96
CTC1-212ENST00000584439 MON2Q7Z3U7 1717 aa9.07□□□□□ -0.96
CTC1-212ENST00000584439 SRPK2P78362 688 aaKnown RBP9.06□□□□□ -0.96
CTC1-212ENST00000584439 POLA2Q14181 598 aa9.06□□□□□ -0.96
CTC1-212ENST00000584439 DCAF11Q8TEB1 546 aa9.06□□□□□ -0.96
CTC1-212ENST00000584439 ZC3H15Q8WU90 426 aaKnown RBP9.06□□□□□ -0.96
CTC1-212ENST00000584439 C10orf71Q711Q0 1435 aa9.05□□□□□ -0.96
CTC1-212ENST00000584439 PHF14O94880 888 aa9.05□□□□□ -0.96
CTC1-212ENST00000584439 SMC1BQ8NDV3 1235 aa9.05□□□□□ -0.96
CTC1-212ENST00000584439 KCNV2Q8TDN2 545 aa9.05□□□□□ -0.96
CTC1-212ENST00000584439 ABHD8Q96I13 439 aa9.05□□□□□ -0.96
CTC1-212ENST00000584439 RBM42Q9BTD8 480 aaKnown RBP9.05□□□□□ -0.96
CTC1-212ENST00000584439 MKRN1Q9UHC7 482 aaKnown RBP9.05□□□□□ -0.96
CTC1-212ENST00000584439 TTC21BQ7Z4L5 1316 aa9.05□□□□□ -0.96
CTC1-212ENST00000584439 DICER1Q9UPY3 1922 aaKnown RBP9.04□□□□□ -0.96
CTC1-212ENST00000584439 KCNH5Q8NCM2 988 aa9.04□□□□□ -0.96
CTC1-212ENST00000584439 ANKRD24Q8TF21 1146 aa9.04□□□□□ -0.96
CTC1-212ENST00000584439 C4AP0C0L4 1744 aa9.03□□□□□ -0.96
CTC1-212ENST00000584439 USP47Q96K76 1375 aa9.03□□□□□ -0.96
CTC1-212ENST00000584439 DPEP1P16444 411 aa9.03□□□□□ -0.96
CTC1-212ENST00000584439 MLLT1Q03111 559 aaPredicted RBP9.03□□□□□ -0.96
CTC1-212ENST00000584439 PRDM10Q9NQV6 1147 aa9.03□□□□□ -0.96
CTC1-212ENST00000584439 CASP8AP2Q9UKL3 1982 aa9.03□□□□□ -0.96
CTC1-212ENST00000584439 PLEKHG2Q9H7P9 1386 aa9.02□□□□□ -0.97
CTC1-212ENST00000584439 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.02□□□□□ -0.97
CTC1-212ENST00000584439 FCHSD2O94868 740 aa9.02□□□□□ -0.97
CTC1-212ENST00000584439 KCNA3P22001 575 aa9.02□□□□□ -0.97
CTC1-212ENST00000584439 LBX1P52954 281 aa9.02□□□□□ -0.97
CTC1-212ENST00000584439 RNF181Q9P0P0 153 aa9.02□□□□□ -0.97
CTC1-212ENST00000584439 KDM2BQ8NHM5 1336 aa9.02□□□□□ -0.97
CTC1-212ENST00000584439 MEGF6O75095 1541 aa9.01□□□□□ -0.97
CTC1-212ENST00000584439 MYH14Q7Z406 1995 aaKnown RBP9.01□□□□□ -0.97
CTC1-212ENST00000584439 MMP10P09238 476 aa9.01□□□□□ -0.97
CTC1-212ENST00000584439 RGS19P49795 217 aa9.01□□□□□ -0.97
CTC1-212ENST00000584439 NBPF1Q3BBV0 1214 aa9.01□□□□□ -0.97
CTC1-212ENST00000584439 CCDC85CA6NKD9 419 aa9□□□□□ -0.97
CTC1-212ENST00000584439 POTECB2RU33 542 aa9□□□□□ -0.97
CTC1-212ENST00000584439 FLAD1Q8NFF5 587 aa9□□□□□ -0.97
CTC1-212ENST00000584439 C1orf115Q9H7X2 142 aa9□□□□□ -0.97
CTC1-212ENST00000584439 PALLDQ8WX93 1383 aa8.99□□□□□ -0.97
CTC1-212ENST00000584439 AFDNP55196 1824 aaKnown RBP8.99□□□□□ -0.97
CTC1-212ENST00000584439 TGFB2P61812 414 aa8.99□□□□□ -0.97
CTC1-212ENST00000584439 LTV1Q96GA3 475 aaPredicted RBP8.99□□□□□ -0.97
CTC1-212ENST00000584439 AK7Q96M32 723 aa8.99□□□□□ -0.97
CTC1-212ENST00000584439 CACNA1SQ13698 1873 aa8.98□□□□□ -0.97
CTC1-212ENST00000584439 RASSF7Q02833 373 aa8.98□□□□□ -0.97
CTC1-212ENST00000584439 LINC00116Q8NCU8 138 aa8.98□□□□□ -0.97
CTC1-212ENST00000584439 DLEC1Q9Y238 1755 aa8.98□□□□□ -0.97
CTC1-212ENST00000584439 RAB3GAP2Q9H2M9 1393 aa8.98□□□□□ -0.97
CTC1-212ENST00000584439 COL5A3P25940 1745 aaPredicted RBP8.97□□□□□ -0.97
CTC1-212ENST00000584439 POTEIP0CG38 1075 aa8.97□□□□□ -0.97
CTC1-212ENST00000584439 POTEJP0CG39 1038 aa8.97□□□□□ -0.97
CTC1-212ENST00000584439 HSPA8P11142 646 aaKnown RBP8.97□□□□□ -0.97
CTC1-212ENST00000584439 CTCFP49711 727 aaPredicted RBP8.97□□□□□ -0.97
CTC1-212ENST00000584439 NME9Q86XW9 330 aa8.97□□□□□ -0.97
CTC1-212ENST00000584439 ZCRB1Q8TBF4 217 aaKnown RBP8.97□□□□□ -0.97
CTC1-212ENST00000584439 DCAF5Q96JK2 942 aa8.97□□□□□ -0.97
CTC1-212ENST00000584439 STK25O00506 426 aa8.96□□□□□ -0.98
CTC1-212ENST00000584439 VEGFAP15692 232 aaPredicted RBP8.96□□□□□ -0.98
CTC1-212ENST00000584439 VEGFBP49765 207 aa8.96□□□□□ -0.98
CTC1-212ENST00000584439 MPRIPQ6WCQ1 1025 aa8.96□□□□□ -0.98
CTC1-212ENST00000584439 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.96□□□□□ -0.98
CTC1-212ENST00000584439 WBP1LQ9NX94 342 aa8.96□□□□□ -0.98
CTC1-212ENST00000584439 TTC21AQ8NDW8 1320 aa8.96□□□□□ -0.98
CTC1-212ENST00000584439 CENPJQ9HC77 1338 aaPredicted RBP8.96□□□□□ -0.98
CTC1-212ENST00000584439 CNTNAP1P78357 1384 aa8.96□□□□□ -0.98
CTC1-212ENST00000584439 GLTPD2A6NH11 291 aa8.95□□□□□ -0.98
CTC1-212ENST00000584439 RIOK3O14730 519 aaKnown RBP8.95□□□□□ -0.98
CTC1-212ENST00000584439 FBLN1P23142 703 aa8.95□□□□□ -0.98
CTC1-212ENST00000584439 SSFA2P28290 1259 aa8.95□□□□□ -0.98
CTC1-212ENST00000584439 CREBZFQ9NS37 354 aa8.95□□□□□ -0.98
CTC1-212ENST00000584439 USP31Q70CQ4 1352 aa8.95□□□□□ -0.98
CTC1-212ENST00000584439 KTN1Q86UP2 1357 aaKnown RBP8.95□□□□□ -0.98
CTC1-212ENST00000584439 KDM6AO15550 1401 aaPredicted RBP8.95□□□□□ -0.98
CTC1-212ENST00000584439 NSD3Q9BZ95 1437 aa8.95□□□□□ -0.98
CTC1-212ENST00000584439 FER1L6Q2WGJ9 1857 aa8.94□□□□□ -0.98
CTC1-212ENST00000584439 CHRNA5P30532 468 aa8.94□□□□□ -0.98
CTC1-212ENST00000584439 ITPK1Q13572 414 aa8.94□□□□□ -0.98
CTC1-212ENST00000584439 CHRDL2Q6WN34 429 aa8.94□□□□□ -0.98
CTC1-212ENST00000584439 USHBP1Q8N6Y0 703 aa8.94□□□□□ -0.98
CTC1-212ENST00000584439 GNPATO15228 680 aa8.93□□□□□ -0.98
CTC1-212ENST00000584439 ZNF692Q9BU19 519 aaPredicted RBP8.93□□□□□ -0.98
CTC1-212ENST00000584439 WDR70Q9NW82 654 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms