RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 FLAD1Q8NFF5 587 aa36.23■■■■□ 3.39
SMARCD2-210ENST00000584400 SLC52A2Q9HAB3 445 aa36.23■■■■□ 3.39
SMARCD2-210ENST00000584400 GNAT3A8MTJ3 354 aa36.22■■■■□ 3.39
SMARCD2-210ENST00000584400 AK7Q96M32 723 aa36.22■■■■□ 3.39
SMARCD2-210ENST00000584400 LGR6Q9HBX8 967 aa36.22■■■■□ 3.39
SMARCD2-210ENST00000584400 PNPLA7Q6ZV29 1317 aa36.22■■■■□ 3.39
SMARCD2-210ENST00000584400 NEFMP07197 916 aa36.21■■■■□ 3.39
SMARCD2-210ENST00000584400 RBM42Q9BTD8 480 aaKnown RBP36.21■■■■□ 3.39
SMARCD2-210ENST00000584400 MAP3K5Q99683 1374 aa36.2■■■■□ 3.39
SMARCD2-210ENST00000584400 ATF5Q9Y2D1 282 aaPredicted RBP36.2■■■■□ 3.39
SMARCD2-210ENST00000584400 SRCAPQ6ZRS2 3230 aa36.19■■■■□ 3.38
SMARCD2-210ENST00000584400 MYBBP1AQ9BQG0 1328 aaKnown RBP36.19■■■■□ 3.38
SMARCD2-210ENST00000584400 C5P01031 1676 aa36.19■■■■□ 3.38
SMARCD2-210ENST00000584400 PNNQ9H307 717 aaKnown RBP36.18■■■■□ 3.38
SMARCD2-210ENST00000584400 PHACTR3Q96KR7 559 aa36.17■■■■□ 3.38
SMARCD2-210ENST00000584400 MSH5O43196 834 aa36.16■■■■□ 3.38
SMARCD2-210ENST00000584400 QSER1Q2KHR3 1735 aa36.16■■■■□ 3.38
SMARCD2-210ENST00000584400 LINC00116Q8NCU8 138 aa36.15■■■■□ 3.38
SMARCD2-210ENST00000584400 SCN11AQ9UI33 1791 aa36.15■■■■□ 3.38
SMARCD2-210ENST00000584400 ITPK1Q13572 414 aa36.14■■■■□ 3.38
SMARCD2-210ENST00000584400 MRC1P22897 1456 aa36.13■■■■□ 3.37
SMARCD2-210ENST00000584400 PTGER2P43116 358 aa36.13■■■■□ 3.37
SMARCD2-210ENST00000584400 TEFQ10587 303 aa36.13■■■■□ 3.37
SMARCD2-210ENST00000584400 ZNF316A6NFI3 1004 aaPredicted RBP36.12■■■■□ 3.37
SMARCD2-210ENST00000584400 PTCD1O75127 700 aaKnown RBP36.12■■■■□ 3.37
SMARCD2-210ENST00000584400 COL23A1Q86Y22 540 aaPredicted RBP36.12■■■■□ 3.37
SMARCD2-210ENST00000584400 C4BP0C0L5 1744 aa36.11■■■■□ 3.37
SMARCD2-210ENST00000584400 POLD1P28340 1107 aa36.1■■■■□ 3.37
SMARCD2-210ENST00000584400 RTF1Q92541 710 aaKnown RBP36.1■■■■□ 3.37
SMARCD2-210ENST00000584400 SSFA2P28290 1259 aa36.09■■■■□ 3.37
SMARCD2-210ENST00000584400 IL17REQ8NFR9 667 aa36.09■■■■□ 3.37
SMARCD2-210ENST00000584400 TAF1LQ8IZX4 1826 aa36.08■■■■□ 3.37
SMARCD2-210ENST00000584400 ADAMTS7Q9UKP4 1686 aa36.08■■■■□ 3.37
SMARCD2-210ENST00000584400 SLC4A9Q96Q91 983 aa36.08■■■■□ 3.37
SMARCD2-210ENST00000584400 PRKRIP1Q9H875 184 aaPredicted RBP36.08■■■■□ 3.37
SMARCD2-210ENST00000584400 ZNF831Q5JPB2 1677 aa36.07■■■■□ 3.37
SMARCD2-210ENST00000584400 GNPATO15228 680 aa36.07■■■■□ 3.36
SMARCD2-210ENST00000584400 SGIP1Q9BQI5 828 aa36.07■■■■□ 3.36
SMARCD2-210ENST00000584400 HTATSF1O43719 755 aaKnown RBP36.06■■■■□ 3.36
SMARCD2-210ENST00000584400 RC3H1Q5TC82 1133 aaKnown RBP36.06■■■■□ 3.36
SMARCD2-210ENST00000584400 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP36.05■■■■□ 3.36
SMARCD2-210ENST00000584400 TTC5Q8N0Z6 440 aa36.05■■■■□ 3.36
SMARCD2-210ENST00000584400 PHF14O94880 888 aa36.04■■■■□ 3.36
SMARCD2-210ENST00000584400 RTCBQ9Y3I0 505 aaKnown RBP36.04■■■■□ 3.36
SMARCD2-210ENST00000584400 CNTNAP4Q9C0A0 1308 aa36.04■■■■□ 3.36
SMARCD2-210ENST00000584400 ARXQ96QS3 562 aa36.03■■■■□ 3.36
SMARCD2-210ENST00000584400 MAPK8IP3Q9UPT6 1336 aa36.03■■■■□ 3.36
SMARCD2-210ENST00000584400 CEMIPQ8WUJ3 1361 aa36.02■■■■□ 3.36
SMARCD2-210ENST00000584400 SLC39A6Q13433 755 aa36.02■■■■□ 3.36
SMARCD2-210ENST00000584400 TUBGCP6Q96RT7 1819 aa36.01■■■■□ 3.35
SMARCD2-210ENST00000584400 PLEKHF1Q96S99 279 aa36■■■■□ 3.35
SMARCD2-210ENST00000584400 VSIG10Q8N0Z9 540 aa35.99■■■■□ 3.35
SMARCD2-210ENST00000584400 ADRA2BP18089 450 aa35.98■■■■□ 3.35
SMARCD2-210ENST00000584400 TRAPPC3LQ5T215 181 aa35.98■■■■□ 3.35
SMARCD2-210ENST00000584400 RPS6KA4O75676 772 aa35.96■■■■□ 3.35
SMARCD2-210ENST00000584400 WDR43Q15061 677 aaKnown RBP eCLIP35.96■■■■□ 3.35
SMARCD2-210ENST00000584400 ZNF790Q6PG37 636 aa35.96■■■■□ 3.35
SMARCD2-210ENST00000584400 AMIGO3Q86WK7 504 aa35.95■■■■□ 3.35
SMARCD2-210ENST00000584400 BTBD11A6QL63 1104 aa35.94■■■■□ 3.34
SMARCD2-210ENST00000584400 CRKLP46109 303 aaKnown RBP35.94■■■■□ 3.34
SMARCD2-210ENST00000584400 MCM10Q7L590 875 aa35.94■■■■□ 3.34
SMARCD2-210ENST00000584400 DCAF8L1A6NGE4 600 aa35.93■■■■□ 3.34
SMARCD2-210ENST00000584400 NFE2L2Q16236 605 aa35.93■■■■□ 3.34
SMARCD2-210ENST00000584400 DNAJC10Q8IXB1 793 aa35.93■■■■□ 3.34
SMARCD2-210ENST00000584400 FHDC1Q9C0D6 1143 aaPredicted RBP35.93■■■■□ 3.34
SMARCD2-210ENST00000584400 UBR3Q6ZT12 1888 aa35.92■■■■□ 3.34
SMARCD2-210ENST00000584400 CICQ96RK0 1608 aaPredicted RBP35.91■■■■□ 3.34
SMARCD2-210ENST00000584400 MSL1Q68DK7 614 aa35.91■■■■□ 3.34
SMARCD2-210ENST00000584400 VIRMAQ69YN4 1812 aaKnown RBP35.91■■■■□ 3.34
SMARCD2-210ENST00000584400 KCPQ6ZWJ8 1503 aa35.91■■■■□ 3.34
SMARCD2-210ENST00000584400 FMNL2Q96PY5 1086 aa35.9■■■■□ 3.34
SMARCD2-210ENST00000584400 SYT17Q9BSW7 474 aa35.9■■■■□ 3.34
SMARCD2-210ENST00000584400 TEX13AQ9BXU3 409 aaPredicted RBP35.9■■■■□ 3.34
SMARCD2-210ENST00000584400 COL5A3P25940 1745 aaPredicted RBP35.9■■■■□ 3.34
SMARCD2-210ENST00000584400 RFC4P35249 363 aa35.89■■■■□ 3.34
SMARCD2-210ENST00000584400 SMIM5Q71RC9 77 aa35.89■■■■□ 3.34
SMARCD2-210ENST00000584400 STARD3NLO95772 234 aa35.88■■■■□ 3.33
SMARCD2-210ENST00000584400 CCDC87Q9NVE4 849 aa35.88■■■■□ 3.33
SMARCD2-210ENST00000584400 CYP19A1P11511 503 aaPredicted RBP35.87■■■■□ 3.33
SMARCD2-210ENST00000584400 DCTN1Q14203 1278 aa35.87■■■■□ 3.33
SMARCD2-210ENST00000584400 ARHGEF1Q92888 912 aaKnown RBP35.87■■■■□ 3.33
SMARCD2-210ENST00000584400 ZNF496Q96IT1 587 aaPredicted RBP35.87■■■■□ 3.33
SMARCD2-210ENST00000584400 COL24A1Q17RW2 1714 aa35.86■■■■□ 3.33
SMARCD2-210ENST00000584400 TAF7Q15545 349 aaPredicted RBP35.86■■■■□ 3.33
SMARCD2-210ENST00000584400 HEG1Q9ULI3 1381 aa35.86■■■■□ 3.33
SMARCD2-210ENST00000584400 INTS5Q6P9B9 1019 aaKnown RBP35.85■■■■□ 3.33
SMARCD2-210ENST00000584400 TJP1Q07157 1748 aa35.85■■■■□ 3.33
SMARCD2-210ENST00000584400 KLHL34Q8N239 644 aa35.83■■■■□ 3.33
SMARCD2-210ENST00000584400 NLGN1Q8N2Q7 840 aa35.83■■■■□ 3.33
SMARCD2-210ENST00000584400 PNISRQ8TF01 805 aaKnown RBP35.83■■■■□ 3.33
SMARCD2-210ENST00000584400 LMOD3Q0VAK6 560 aa35.82■■■■□ 3.32
SMARCD2-210ENST00000584400 SIPA1L3O60292 1781 aaPredicted RBP35.81■■■■□ 3.32
SMARCD2-210ENST00000584400 ANP32CO43423 234 aa35.81■■■■□ 3.32
SMARCD2-210ENST00000584400 RUNDC1Q96C34 613 aa35.81■■■■□ 3.32
SMARCD2-210ENST00000584400 UBR2Q8IWV8 1755 aa35.81■■■■□ 3.32
SMARCD2-210ENST00000584400 RIPK4P57078 832 aa35.8■■■■□ 3.32
SMARCD2-210ENST00000584400 ADAMTS8Q9UP79 889 aa35.79■■■■□ 3.32
SMARCD2-210ENST00000584400 TMPOP42166 694 aaKnown RBP35.77■■■■□ 3.32
SMARCD2-210ENST00000584400 SOS1Q07889 1333 aaPredicted RBP35.77■■■■□ 3.32
SMARCD2-210ENST00000584400 KCNQ3O43525 872 aa35.76■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms