RNA–Protein interactions for RNA: ENST00000584397.1

ARHGDIA-216, Transcript of Rho GDP dissociation inhibitor alpha, human

TSL 2

Gene ARHGDIA, Length 622 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGDIA-216	ENST00000584397	ANP32C	O43423	234 aa		32.96	■■■□□ 2.87
ARHGDIA-216	ENST00000584397	STK32B	Q9NY57	414 aa		32.96	■■■□□ 2.87
ARHGDIA-216	ENST00000584397	LOC102724428	A0A0B4J2F2	783 aa		32.95	■■■□□ 2.87
ARHGDIA-216	ENST00000584397	SIK1	P57059	783 aa		32.95	■■■□□ 2.87
ARHGDIA-216	ENST00000584397	HTATSF1	O43719	755 aa	Known RBP	32.94	■■■□□ 2.86
ARHGDIA-216	ENST00000584397	HMGB2	P26583	209 aa	Known RBP	32.94	■■■□□ 2.86
ARHGDIA-216	ENST00000584397	ZNF827	Q17R98	1081 aa		32.94	■■■□□ 2.86
ARHGDIA-216	ENST00000584397	VIRMA	Q69YN4	1812 aa	Known RBP	32.93	■■■□□ 2.86
ARHGDIA-216	ENST00000584397	NEFM	P07197	916 aa		32.91	■■■□□ 2.86
ARHGDIA-216	ENST00000584397	ADAMTS8	Q9UP79	889 aa		32.91	■■■□□ 2.86
ARHGDIA-216	ENST00000584397	WDR43	Q15061	677 aa	Known RBP eCLIP	32.9	■■■□□ 2.86
ARHGDIA-216	ENST00000584397	NFE2L2	Q16236	605 aa		32.9	■■■□□ 2.86
ARHGDIA-216	ENST00000584397	CCDC184	Q52MB2	194 aa		32.9	■■■□□ 2.86
ARHGDIA-216	ENST00000584397	SLC4A9	Q96Q91	983 aa		32.9	■■■□□ 2.86
ARHGDIA-216	ENST00000584397	ZNF831	Q5JPB2	1677 aa		32.9	■■■□□ 2.86
ARHGDIA-216	ENST00000584397	TAF1L	Q8IZX4	1826 aa		32.87	■■■□□ 2.85
ARHGDIA-216	ENST00000584397	ITPK1	Q13572	414 aa		32.87	■■■□□ 2.85
ARHGDIA-216	ENST00000584397	C5	P01031	1676 aa		32.87	■■■□□ 2.85
ARHGDIA-216	ENST00000584397	SRCAP	Q6ZRS2	3230 aa		32.86	■■■□□ 2.85
ARHGDIA-216	ENST00000584397	MAPK8IP3	Q9UPT6	1336 aa		32.86	■■■□□ 2.85
ARHGDIA-216	ENST00000584397	SIPA1L3	O60292	1781 aa	Predicted RBP	32.86	■■■□□ 2.85
ARHGDIA-216	ENST00000584397	TEF	Q10587	303 aa		32.85	■■■□□ 2.85
ARHGDIA-216	ENST00000584397	RTF1	Q92541	710 aa	Known RBP	32.85	■■■□□ 2.85
ARHGDIA-216	ENST00000584397	CASZ1	Q86V15	1759 aa		32.85	■■■□□ 2.85
ARHGDIA-216	ENST00000584397	ATP6V1A	P38606	617 aa		32.84	■■■□□ 2.85
ARHGDIA-216	ENST00000584397	MCM10	Q7L590	875 aa		32.83	■■■□□ 2.85
ARHGDIA-216	ENST00000584397	LINC00116	Q8NCU8	138 aa		32.83	■■■□□ 2.85
ARHGDIA-216	ENST00000584397	RUNDC1	Q96C34	613 aa		32.83	■■■□□ 2.85
ARHGDIA-216	ENST00000584397	PDGFD	Q9GZP0	370 aa	Predicted RBP	32.83	■■■□□ 2.85
ARHGDIA-216	ENST00000584397	QSER1	Q2KHR3	1735 aa		32.82	■■■□□ 2.85
ARHGDIA-216	ENST00000584397	SLC39A6	Q13433	755 aa		32.82	■■■□□ 2.84
ARHGDIA-216	ENST00000584397	RBM42	Q9BTD8	480 aa	Known RBP	32.81	■■■□□ 2.84
ARHGDIA-216	ENST00000584397	KCP	Q6ZWJ8	1503 aa		32.81	■■■□□ 2.84
ARHGDIA-216	ENST00000584397	CIC	Q96RK0	1608 aa	Predicted RBP	32.8	■■■□□ 2.84
ARHGDIA-216	ENST00000584397	C4B	P0C0L5	1744 aa		32.8	■■■□□ 2.84
ARHGDIA-216	ENST00000584397	PTCD1	O75127	700 aa	Known RBP	32.8	■■■□□ 2.84
ARHGDIA-216	ENST00000584397	TMPO	P42166	694 aa	Known RBP	32.8	■■■□□ 2.84
ARHGDIA-216	ENST00000584397	DCTN1	Q14203	1278 aa		32.8	■■■□□ 2.84
ARHGDIA-216	ENST00000584397	DLG5	Q8TDM6	1919 aa		32.8	■■■□□ 2.84
ARHGDIA-216	ENST00000584397	PNPLA7	Q6ZV29	1317 aa		32.79	■■■□□ 2.84
ARHGDIA-216	ENST00000584397	PNISR	Q8TF01	805 aa	Known RBP	32.79	■■■□□ 2.84
ARHGDIA-216	ENST00000584397	TFCP2L1	Q9NZI6	479 aa		32.79	■■■□□ 2.84
ARHGDIA-216	ENST00000584397	CCDC146	Q8IYE0	955 aa		32.78	■■■□□ 2.84
ARHGDIA-216	ENST00000584397	ZNF790	Q6PG37	636 aa		32.77	■■■□□ 2.84
ARHGDIA-216	ENST00000584397	LRP5	O75197	1615 aa		32.77	■■■□□ 2.84
ARHGDIA-216	ENST00000584397	UBR2	Q8IWV8	1755 aa		32.76	■■■□□ 2.84
ARHGDIA-216	ENST00000584397	TUBGCP6	Q96RT7	1819 aa		32.76	■■■□□ 2.83
ARHGDIA-216	ENST00000584397	RIPK4	P57078	832 aa		32.75	■■■□□ 2.83
ARHGDIA-216	ENST00000584397	RC3H1	Q5TC82	1133 aa	Known RBP	32.75	■■■□□ 2.83
ARHGDIA-216	ENST00000584397	VSIG10	Q8N0Z9	540 aa		32.75	■■■□□ 2.83
ARHGDIA-216	ENST00000584397	MRS2	Q9HD23	443 aa		32.75	■■■□□ 2.83
ARHGDIA-216	ENST00000584397	COL5A3	P25940	1745 aa	Predicted RBP	32.74	■■■□□ 2.83
ARHGDIA-216	ENST00000584397	BTBD11	A6QL63	1104 aa		32.73	■■■□□ 2.83
ARHGDIA-216	ENST00000584397	TAF7	Q15545	349 aa	Predicted RBP	32.73	■■■□□ 2.83
ARHGDIA-216	ENST00000584397	CNTNAP4	Q9C0A0	1308 aa		32.73	■■■□□ 2.83
ARHGDIA-216	ENST00000584397	AMIGO3	Q86WK7	504 aa		32.72	■■■□□ 2.83
ARHGDIA-216	ENST00000584397	AK7	Q96M32	723 aa		32.72	■■■□□ 2.83
ARHGDIA-216	ENST00000584397	TJP1	Q07157	1748 aa		32.71	■■■□□ 2.83
ARHGDIA-216	ENST00000584397	COL23A1	Q86Y22	540 aa	Predicted RBP	32.71	■■■□□ 2.83
ARHGDIA-216	ENST00000584397	TTC5	Q8N0Z6	440 aa		32.71	■■■□□ 2.83
ARHGDIA-216	ENST00000584397	FLAD1	Q8NFF5	587 aa		32.71	■■■□□ 2.83
ARHGDIA-216	ENST00000584397	SLC16A10	Q8TF71	515 aa		32.71	■■■□□ 2.83
ARHGDIA-216	ENST00000584397	ZNF496	Q96IT1	587 aa	Predicted RBP	32.71	■■■□□ 2.83
ARHGDIA-216	ENST00000584397	UBR3	Q6ZT12	1888 aa		32.69	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	KCNQ3	O43525	872 aa		32.69	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	LMOD3	Q0VAK6	560 aa		32.69	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	THUMPD2	Q9BTF0	503 aa	Known RBP	32.69	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	MTFR1L	Q9H019	292 aa		32.69	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	SPON1	Q9HCB6	807 aa		32.69	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	SSFA2	P28290	1259 aa		32.68	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	DNAJC10	Q8IXB1	793 aa		32.68	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	TRIM35	Q9UPQ4	493 aa		32.68	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	RRP7A	Q9Y3A4	280 aa	Known RBP	32.68	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	ZBTB7A	O95365	584 aa		32.67	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	HEG1	Q9ULI3	1381 aa		32.67	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	MYH14	Q7Z406	1995 aa	Known RBP	32.66	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	GNPAT	O15228	680 aa		32.65	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	CYP19A1	P11511	503 aa	Predicted RBP	32.65	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	CRKL	P46109	303 aa	Known RBP	32.65	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	FMNL2	Q96PY5	1086 aa		32.65	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	SGIP1	Q9BQI5	828 aa		32.65	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.64	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	APAF1	O14727	1248 aa		32.64	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	RPS6KA4	O75676	772 aa		32.64	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	PTGER2	P43116	358 aa		32.64	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	INTS5	Q6P9B9	1019 aa	Known RBP	32.64	■■■□□ 2.82
ARHGDIA-216	ENST00000584397	SMIM5	Q71RC9	77 aa		32.62	■■■□□ 2.81
ARHGDIA-216	ENST00000584397	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.62	■■■□□ 2.81
ARHGDIA-216	ENST00000584397	COL24A1	Q17RW2	1714 aa		32.61	■■■□□ 2.81
ARHGDIA-216	ENST00000584397	NEUROD2	Q15784	382 aa		32.61	■■■□□ 2.81
ARHGDIA-216	ENST00000584397	BABAM1	Q9NWV8	329 aa		32.61	■■■□□ 2.81
ARHGDIA-216	ENST00000584397	RTCB	Q9Y3I0	505 aa	Known RBP	32.61	■■■□□ 2.81
ARHGDIA-216	ENST00000584397	ADRA2B	P18089	450 aa		32.6	■■■□□ 2.81
ARHGDIA-216	ENST00000584397	MIS18A	Q9NYP9	233 aa		32.6	■■■□□ 2.81
ARHGDIA-216	ENST00000584397	ATF5	Q9Y2D1	282 aa	Predicted RBP	32.6	■■■□□ 2.81
ARHGDIA-216	ENST00000584397	CCDC87	Q9NVE4	849 aa		32.59	■■■□□ 2.81
ARHGDIA-216	ENST00000584397	KDM3B	Q7LBC6	1761 aa		32.58	■■■□□ 2.81
ARHGDIA-216	ENST00000584397	PHF14	O94880	888 aa		32.57	■■■□□ 2.8
ARHGDIA-216	ENST00000584397	STARD3NL	O95772	234 aa		32.57	■■■□□ 2.8
ARHGDIA-216	ENST00000584397	NCBP3	Q53F19	620 aa	Known RBP	32.56	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms