RNA–Protein interactions for RNA: ENST00000584336.1

CDK12-208, Transcript of cyclin dependent kinase 12, humanhuman

Gene CDK12, Length 1,963 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-208ENST00000584336 RGS12O14924 1447 aa13.28□□□□□ -0.28
CDK12-208ENST00000584336 TEFQ10587 303 aa13.28□□□□□ -0.28
CDK12-208ENST00000584336 SLC39A6Q13433 755 aa13.28□□□□□ -0.28
CDK12-208ENST00000584336 NUTM2AQ8IVF1 878 aaPredicted RBP13.28□□□□□ -0.28
CDK12-208ENST00000584336 C1orf115Q9H7X2 142 aa13.28□□□□□ -0.28
CDK12-208ENST00000584336 BTG4Q9NY30 223 aa13.28□□□□□ -0.28
CDK12-208ENST00000584336 RGS17Q9UGC6 210 aaPredicted RBP13.28□□□□□ -0.28
CDK12-208ENST00000584336 EVA1CP58658 441 aa13.27□□□□□ -0.28
CDK12-208ENST00000584336 ABCC6O95255 1503 aa13.27□□□□□ -0.28
CDK12-208ENST00000584336 F6X3S4 739 aa13.27□□□□□ -0.29
CDK12-208ENST00000584336 EIF2S2P20042 333 aaKnown RBP13.27□□□□□ -0.29
CDK12-208ENST00000584336 CENPQQ7L2Z9 268 aaPredicted RBP13.27□□□□□ -0.29
CDK12-208ENST00000584336 ARHGAP45Q92619 1136 aa13.27□□□□□ -0.29
CDK12-208ENST00000584336 ABCC4O15439 1325 aa13.26□□□□□ -0.29
CDK12-208ENST00000584336 ADAMTS2O95450 1211 aa13.26□□□□□ -0.29
CDK12-208ENST00000584336 ANXA1P04083 346 aa13.26□□□□□ -0.29
CDK12-208ENST00000584336 SPG7Q9UQ90 795 aa13.26□□□□□ -0.29
CDK12-208ENST00000584336 KDM3BQ7LBC6 1761 aa13.26□□□□□ -0.29
CDK12-208ENST00000584336 ZBTB7BO15156 539 aaPredicted RBP13.25□□□□□ -0.29
CDK12-208ENST00000584336 ZBTB40Q9NUA8 1239 aa13.25□□□□□ -0.29
CDK12-208ENST00000584336 MS4A1P11836 297 aa13.25□□□□□ -0.29
CDK12-208ENST00000584336 IFNL2Q8IZJ0 200 aa13.25□□□□□ -0.29
CDK12-208ENST00000584336 NFATC2IPQ8NCF5 419 aa13.25□□□□□ -0.29
CDK12-208ENST00000584336 PHAXQ9H814 394 aaKnown RBP13.25□□□□□ -0.29
CDK12-208ENST00000584336 DDX19BQ9UMR2 479 aa13.25□□□□□ -0.29
CDK12-208ENST00000584336 MEX3CQ5U5Q3 659 aaKnown RBP13.24□□□□□ -0.29
CDK12-208ENST00000584336 CARD10Q9BWT7 1032 aa13.24□□□□□ -0.29
CDK12-208ENST00000584336 BABAM1Q9NWV8 329 aa13.24□□□□□ -0.29
CDK12-208ENST00000584336 RBM19Q9Y4C8 960 aaKnown RBP13.24□□□□□ -0.29
CDK12-208ENST00000584336 OVOS2A0A0G2JMS6 1433 aa13.24□□□□□ -0.29
CDK12-208ENST00000584336 SIPA1L3O60292 1781 aaPredicted RBP13.23□□□□□ -0.29
CDK12-208ENST00000584336 ILDR2Q71H61 639 aa13.23□□□□□ -0.29
CDK12-208ENST00000584336 API5Q9BZZ5 524 aaKnown RBP13.23□□□□□ -0.29
CDK12-208ENST00000584336 ADAMTS7Q9UKP4 1686 aa13.23□□□□□ -0.29
CDK12-208ENST00000584336 RGS3P49796 1198 aa13.23□□□□□ -0.29
CDK12-208ENST00000584336 HDGFL1Q5TGJ6 251 aa13.23□□□□□ -0.29
CDK12-208ENST00000584336 DDX54Q8TDD1 881 aaKnown RBP13.23□□□□□ -0.29
CDK12-208ENST00000584336 SLC52A2Q9HAB3 445 aa13.23□□□□□ -0.29
CDK12-208ENST00000584336 PKD1L3Q7Z443 1732 aa13.23□□□□□ -0.29
CDK12-208ENST00000584336 ZCRB1Q8TBF4 217 aaKnown RBP13.22□□□□□ -0.29
CDK12-208ENST00000584336 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.22□□□□□ -0.29
CDK12-208ENST00000584336 SCN11AQ9UI33 1791 aa13.22□□□□□ -0.29
CDK12-208ENST00000584336 IL2RBP14784 551 aa13.21□□□□□ -0.29
CDK12-208ENST00000584336 PROSER3Q2NL68 480 aa13.21□□□□□ -0.29
CDK12-208ENST00000584336 CCDC30Q5VVM6 783 aa13.21□□□□□ -0.29
CDK12-208ENST00000584336 SLC4A10Q6U841 1118 aa13.21□□□□□ -0.29
CDK12-208ENST00000584336 FLIIQ13045 1269 aa13.21□□□□□ -0.29
CDK12-208ENST00000584336 CHPF2Q9P2E5 772 aa13.21□□□□□ -0.29
CDK12-208ENST00000584336 GIGYF1O75420 1035 aaPredicted RBP13.2□□□□□ -0.3
CDK12-208ENST00000584336 INTS3Q68E01 1043 aaKnown RBP13.2□□□□□ -0.3
CDK12-208ENST00000584336 POTEAQ6S8J7 498 aa13.2□□□□□ -0.3
CDK12-208ENST00000584336 SIRT2Q8IXJ6 389 aa13.2□□□□□ -0.3
CDK12-208ENST00000584336 STK31Q9BXU1 1019 aa13.2□□□□□ -0.3
CDK12-208ENST00000584336 SHANK3Q9BYB0 1731 aa13.2□□□□□ -0.3
CDK12-208ENST00000584336 ZNF772Q68DY9 489 aaPredicted RBP13.2□□□□□ -0.3
CDK12-208ENST00000584336 PDZRN3Q9UPQ7 1066 aa13.2□□□□□ -0.3
CDK12-208ENST00000584336 PIP4K2AP48426 406 aaPredicted RBP13.19□□□□□ -0.3
CDK12-208ENST00000584336 ZNF790Q6PG37 636 aa13.19□□□□□ -0.3
CDK12-208ENST00000584336 NGLY1Q96IV0 654 aa13.19□□□□□ -0.3
CDK12-208ENST00000584336 DCAF5Q96JK2 942 aa13.19□□□□□ -0.3
CDK12-208ENST00000584336 C8orf37Q96NL8 207 aa13.19□□□□□ -0.3
CDK12-208ENST00000584336 MEIS3Q99687 375 aa13.19□□□□□ -0.3
CDK12-208ENST00000584336 PARP4Q9UKK3 1724 aaKnown RBP13.19□□□□□ -0.3
CDK12-208ENST00000584336 PTPRCP08575 1304 aa13.19□□□□□ -0.3
CDK12-208ENST00000584336 AFF2P51816 1311 aa13.19□□□□□ -0.3
CDK12-208ENST00000584336 HEG1Q9ULI3 1381 aa13.19□□□□□ -0.3
CDK12-208ENST00000584336 COL14A1Q05707 1796 aaKnown RBP13.18□□□□□ -0.3
CDK12-208ENST00000584336 FKBP5Q13451 457 aaPredicted RBP13.18□□□□□ -0.3
CDK12-208ENST00000584336 FNBP4Q8N3X1 1017 aaPredicted RBP13.18□□□□□ -0.3
CDK12-208ENST00000584336 ZNF496Q96IT1 587 aaPredicted RBP13.18□□□□□ -0.3
CDK12-208ENST00000584336 RWDD1Q9H446 243 aaPredicted RBP13.18□□□□□ -0.3
CDK12-208ENST00000584336 CABP4P57796 275 aa13.18□□□□□ -0.3
CDK12-208ENST00000584336 PCDH11XQ9BZA7 1347 aa13.17□□□□□ -0.3
CDK12-208ENST00000584336 PCDH11YQ9BZA8 1340 aa13.17□□□□□ -0.3
CDK12-208ENST00000584336 USP16Q9Y5T5 823 aa13.17□□□□□ -0.3
CDK12-208ENST00000584336 C5P01031 1676 aa13.16□□□□□ -0.3
CDK12-208ENST00000584336 AAMPQ13685 434 aa13.16□□□□□ -0.3
CDK12-208ENST00000584336 HDAC1Q13547 482 aaPredicted RBP13.16□□□□□ -0.3
CDK12-208ENST00000584336 MRC1P22897 1456 aa13.15□□□□□ -0.3
CDK12-208ENST00000584336 PDE4AP27815 886 aa13.15□□□□□ -0.3
CDK12-208ENST00000584336 PDIA6Q15084 440 aa13.15□□□□□ -0.3
CDK12-208ENST00000584336 PLCH1Q4KWH8 1693 aa13.15□□□□□ -0.3
CDK12-208ENST00000584336 HOXB7P09629 217 aa13.14□□□□□ -0.31
CDK12-208ENST00000584336 NKX1-1Q15270 411 aaPredicted RBP13.14□□□□□ -0.31
CDK12-208ENST00000584336 TOGARAM1Q9Y4F4 1720 aa13.14□□□□□ -0.31
CDK12-208ENST00000584336 DISP2A7MBM2 1401 aa13.14□□□□□ -0.31
CDK12-208ENST00000584336 SOS1Q07889 1333 aaPredicted RBP13.14□□□□□ -0.31
CDK12-208ENST00000584336 HSP90AB1P08238 724 aaKnown RBP13.14□□□□□ -0.31
CDK12-208ENST00000584336 USP21Q9UK80 565 aa13.14□□□□□ -0.31
CDK12-208ENST00000584336 SLIT2O94813 1529 aa13.13□□□□□ -0.31
CDK12-208ENST00000584336 MYL6BP14649 208 aa13.13□□□□□ -0.31
CDK12-208ENST00000584336 AIMP1Q12904 312 aaKnown RBP13.13□□□□□ -0.31
CDK12-208ENST00000584336 QTRT2Q9H974 415 aaKnown RBP13.13□□□□□ -0.31
CDK12-208ENST00000584336 BCL9LQ86UU0 1499 aa13.13□□□□□ -0.31
CDK12-208ENST00000584336 GLI3P10071 1580 aa13.13□□□□□ -0.31
CDK12-208ENST00000584336 ADCY9O60503 1353 aa13.13□□□□□ -0.31
CDK12-208ENST00000584336 PI4KAP2A4QPH2 592 aa13.12□□□□□ -0.31
CDK12-208ENST00000584336 PI4KAP1Q8N8J0 262 aa13.12□□□□□ -0.31
CDK12-208ENST00000584336 NRAPQ86VF7 1730 aa13.12□□□□□ -0.31
CDK12-208ENST00000584336 SMC5Q8IY18 1101 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms