RNA–Protein interactions for RNA: ENST00000584273.1

LINC01956-202, Transcript of long intergenic non-protein coding RNA 1956, humanhuman

TSL 3 BASIC

Gene LINC01956, Length 612 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01956-202ENST00000584273 PNPLA7Q6ZV29 1317 aa23.43■■□□□ 1.34
LINC01956-202ENST00000584273 RALBP1Q15311 655 aa23.43■■□□□ 1.34
LINC01956-202ENST00000584273 NFATC2IPQ8NCF5 419 aa23.43■■□□□ 1.34
LINC01956-202ENST00000584273 RBM42Q9BTD8 480 aaKnown RBP23.42■■□□□ 1.34
LINC01956-202ENST00000584273 MAP3K5Q99683 1374 aa23.41■■□□□ 1.34
LINC01956-202ENST00000584273 RNMTO43148 476 aaKnown RBP23.41■■□□□ 1.34
LINC01956-202ENST00000584273 PHACTR3Q96KR7 559 aa23.41■■□□□ 1.34
LINC01956-202ENST00000584273 MRC1P22897 1456 aa23.41■■□□□ 1.34
LINC01956-202ENST00000584273 ADAMTS7Q9UKP4 1686 aa23.41■■□□□ 1.34
LINC01956-202ENST00000584273 ATP6V1AP38606 617 aa23.4■■□□□ 1.34
LINC01956-202ENST00000584273 ITPK1Q13572 414 aa23.4■■□□□ 1.34
LINC01956-202ENST00000584273 LINC00116Q8NCU8 138 aa23.4■■□□□ 1.34
LINC01956-202ENST00000584273 GAS2L2Q8NHY3 880 aa23.4■■□□□ 1.34
LINC01956-202ENST00000584273 PPP1R1BQ9UD71 204 aaPredicted RBP23.4■■□□□ 1.34
LINC01956-202ENST00000584273 MSH5O43196 834 aa23.39■■□□□ 1.33
LINC01956-202ENST00000584273 AK7Q96M32 723 aa23.39■■□□□ 1.33
LINC01956-202ENST00000584273 SLC52A2Q9HAB3 445 aa23.39■■□□□ 1.33
LINC01956-202ENST00000584273 PTCD1O75127 700 aaKnown RBP23.38■■□□□ 1.33
LINC01956-202ENST00000584273 MTFR1LQ9H019 292 aa23.38■■□□□ 1.33
LINC01956-202ENST00000584273 MYBBP1AQ9BQG0 1328 aaKnown RBP23.37■■□□□ 1.33
LINC01956-202ENST00000584273 GNAT3A8MTJ3 354 aa23.36■■□□□ 1.33
LINC01956-202ENST00000584273 FCHSD2O94868 740 aa23.36■■□□□ 1.33
LINC01956-202ENST00000584273 SMIM5Q71RC9 77 aa23.36■■□□□ 1.33
LINC01956-202ENST00000584273 SLC4A9Q96Q91 983 aa23.36■■□□□ 1.33
LINC01956-202ENST00000584273 UBR3Q6ZT12 1888 aa23.36■■□□□ 1.33
LINC01956-202ENST00000584273 PHF14O94880 888 aa23.35■■□□□ 1.33
LINC01956-202ENST00000584273 COL5A3P25940 1745 aaPredicted RBP23.35■■□□□ 1.33
LINC01956-202ENST00000584273 PTGER2P43116 358 aa23.34■■□□□ 1.33
LINC01956-202ENST00000584273 AMIGO3Q86WK7 504 aa23.34■■□□□ 1.33
LINC01956-202ENST00000584273 COL23A1Q86Y22 540 aaPredicted RBP23.34■■□□□ 1.33
LINC01956-202ENST00000584273 ZNF831Q5JPB2 1677 aa23.34■■□□□ 1.33
LINC01956-202ENST00000584273 TJP1Q07157 1748 aa23.33■■□□□ 1.33
LINC01956-202ENST00000584273 ZNF316A6NFI3 1004 aaPredicted RBP23.33■■□□□ 1.33
LINC01956-202ENST00000584273 SLC39A6Q13433 755 aa23.33■■□□□ 1.33
LINC01956-202ENST00000584273 GNPATO15228 680 aa23.32■■□□□ 1.32
LINC01956-202ENST00000584273 IL17REQ8NFR9 667 aa23.32■■□□□ 1.32
LINC01956-202ENST00000584273 HMGB2P26583 209 aaKnown RBP23.31■■□□□ 1.32
LINC01956-202ENST00000584273 SIPA1L3O60292 1781 aaPredicted RBP23.31■■□□□ 1.32
LINC01956-202ENST00000584273 TEFQ10587 303 aa23.3■■□□□ 1.32
LINC01956-202ENST00000584273 MSL1Q68DK7 614 aa23.3■■□□□ 1.32
LINC01956-202ENST00000584273 PRKRIP1Q9H875 184 aaPredicted RBP23.3■■□□□ 1.32
LINC01956-202ENST00000584273 KCPQ6ZWJ8 1503 aa23.29■■□□□ 1.32
LINC01956-202ENST00000584273 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.29■■□□□ 1.32
LINC01956-202ENST00000584273 SLC16A10Q8TF71 515 aa23.29■■□□□ 1.32
LINC01956-202ENST00000584273 SGIP1Q9BQI5 828 aa23.29■■□□□ 1.32
LINC01956-202ENST00000584273 NEFMP07197 916 aa23.28■■□□□ 1.32
LINC01956-202ENST00000584273 MCM10Q7L590 875 aa23.28■■□□□ 1.32
LINC01956-202ENST00000584273 DLG5Q8TDM6 1919 aa23.27■■□□□ 1.32
LINC01956-202ENST00000584273 UBR2Q8IWV8 1755 aa23.27■■□□□ 1.32
LINC01956-202ENST00000584273 CICQ96RK0 1608 aaPredicted RBP23.27■■□□□ 1.32
LINC01956-202ENST00000584273 CEMIPQ8WUJ3 1361 aa23.27■■□□□ 1.31
LINC01956-202ENST00000584273 COL24A1Q17RW2 1714 aa23.26■■□□□ 1.31
LINC01956-202ENST00000584273 DCTN1Q14203 1278 aa23.26■■□□□ 1.31
LINC01956-202ENST00000584273 FLAD1Q8NFF5 587 aa23.26■■□□□ 1.31
LINC01956-202ENST00000584273 RTF1Q92541 710 aaKnown RBP23.26■■□□□ 1.31
LINC01956-202ENST00000584273 MAPK8IP3Q9UPT6 1336 aa23.26■■□□□ 1.31
LINC01956-202ENST00000584273 SSFA2P28290 1259 aa23.25■■□□□ 1.31
LINC01956-202ENST00000584273 POLD1P28340 1107 aa23.25■■□□□ 1.31
LINC01956-202ENST00000584273 TTC5Q8N0Z6 440 aa23.25■■□□□ 1.31
LINC01956-202ENST00000584273 ARXQ96QS3 562 aa23.25■■□□□ 1.31
LINC01956-202ENST00000584273 PLEKHF1Q96S99 279 aa23.25■■□□□ 1.31
LINC01956-202ENST00000584273 MYH14Q7Z406 1995 aaKnown RBP23.25■■□□□ 1.31
LINC01956-202ENST00000584273 DNAJC10Q8IXB1 793 aa23.24■■□□□ 1.31
LINC01956-202ENST00000584273 KLHL34Q8N239 644 aa23.24■■□□□ 1.31
LINC01956-202ENST00000584273 CNTNAP4Q9C0A0 1308 aa23.24■■□□□ 1.31
LINC01956-202ENST00000584273 CRKLP46109 303 aaKnown RBP23.23■■□□□ 1.31
LINC01956-202ENST00000584273 FHDC1Q9C0D6 1143 aaPredicted RBP23.23■■□□□ 1.31
LINC01956-202ENST00000584273 RTCBQ9Y3I0 505 aaKnown RBP23.23■■□□□ 1.31
LINC01956-202ENST00000584273 WDR43Q15061 677 aaKnown RBP eCLIP23.21■■□□□ 1.31
LINC01956-202ENST00000584273 CCDC146Q8IYE0 955 aa23.21■■□□□ 1.31
LINC01956-202ENST00000584273 PNNQ9H307 717 aaKnown RBP23.21■■□□□ 1.31
LINC01956-202ENST00000584273 C4AP0C0L4 1744 aa23.21■■□□□ 1.31
LINC01956-202ENST00000584273 BTBD11A6QL63 1104 aa23.2■■□□□ 1.3
LINC01956-202ENST00000584273 NFE2L2Q16236 605 aa23.2■■□□□ 1.3
LINC01956-202ENST00000584273 RC3H1Q5TC82 1133 aaKnown RBP23.2■■□□□ 1.3
LINC01956-202ENST00000584273 ZNF790Q6PG37 636 aa23.2■■□□□ 1.3
LINC01956-202ENST00000584273 ZNF496Q96IT1 587 aaPredicted RBP23.19■■□□□ 1.3
LINC01956-202ENST00000584273 KCNQ3O43525 872 aa23.18■■□□□ 1.3
LINC01956-202ENST00000584273 RPS6KA4O75676 772 aa23.18■■□□□ 1.3
LINC01956-202ENST00000584273 TRAPPC3LQ5T215 181 aa23.18■■□□□ 1.3
LINC01956-202ENST00000584273 HTATSF1O43719 755 aaKnown RBP23.17■■□□□ 1.3
LINC01956-202ENST00000584273 THUMPD2Q9BTF0 503 aaKnown RBP23.17■■□□□ 1.3
LINC01956-202ENST00000584273 CCDC87Q9NVE4 849 aa23.17■■□□□ 1.3
LINC01956-202ENST00000584273 CYP19A1P11511 503 aaPredicted RBP23.16■■□□□ 1.3
LINC01956-202ENST00000584273 INTS5Q6P9B9 1019 aaKnown RBP23.16■■□□□ 1.3
LINC01956-202ENST00000584273 ARHGEF1Q92888 912 aaKnown RBP23.16■■□□□ 1.3
LINC01956-202ENST00000584273 SYT17Q9BSW7 474 aa23.16■■□□□ 1.3
LINC01956-202ENST00000584273 HEG1Q9ULI3 1381 aa23.15■■□□□ 1.3
LINC01956-202ENST00000584273 RFC4P35249 363 aa23.15■■□□□ 1.3
LINC01956-202ENST00000584273 VSIG10Q8N0Z9 540 aa23.15■■□□□ 1.3
LINC01956-202ENST00000584273 ADRA2BP18089 450 aa23.14■■□□□ 1.29
LINC01956-202ENST00000584273 FMNL2Q96PY5 1086 aa23.14■■□□□ 1.29
LINC01956-202ENST00000584273 ADAMTS8Q9UP79 889 aa23.14■■□□□ 1.29
LINC01956-202ENST00000584273 RRP7AQ9Y3A4 280 aaKnown RBP23.14■■□□□ 1.29
LINC01956-202ENST00000584273 MIS18AQ9NYP9 233 aa23.13■■□□□ 1.29
LINC01956-202ENST00000584273 ZBTB1Q9Y2K1 713 aa23.13■■□□□ 1.29
LINC01956-202ENST00000584273 RIPK4P57078 832 aa23.12■■□□□ 1.29
LINC01956-202ENST00000584273 SRP68Q9UHB9 627 aaKnown RBP23.12■■□□□ 1.29
LINC01956-202ENST00000584273 CANXP27824 592 aaKnown RBP23.11■■□□□ 1.29
LINC01956-202ENST00000584273 NEUROD2Q15784 382 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms