RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 DEFB132Q7Z7B7 95 aa10.99□□□□□ -0.65
ERBB2-216ENST00000584014 NFATC2IPQ8NCF5 419 aa10.99□□□□□ -0.65
ERBB2-216ENST00000584014 THUMPD2Q9BTF0 503 aaKnown RBP10.99□□□□□ -0.65
ERBB2-216ENST00000584014 BCL11BQ9C0K0 894 aaPredicted RBP10.99□□□□□ -0.65
ERBB2-216ENST00000584014 SBF2Q86WG5 1849 aa10.99□□□□□ -0.65
ERBB2-216ENST00000584014 VIRMAQ69YN4 1812 aaKnown RBP10.98□□□□□ -0.65
ERBB2-216ENST00000584014 RNMTO43148 476 aaKnown RBP10.98□□□□□ -0.65
ERBB2-216ENST00000584014 BAG6P46379 1132 aa10.98□□□□□ -0.65
ERBB2-216ENST00000584014 LAS1LQ9Y4W2 734 aaKnown RBP10.98□□□□□ -0.65
ERBB2-216ENST00000584014 EP400Q96L91 3159 aa10.98□□□□□ -0.65
ERBB2-216ENST00000584014 DLG5Q8TDM6 1919 aa10.97□□□□□ -0.65
ERBB2-216ENST00000584014 NKX1-1Q15270 411 aaPredicted RBP10.97□□□□□ -0.65
ERBB2-216ENST00000584014 IL17REQ8NFR9 667 aa10.97□□□□□ -0.65
ERBB2-216ENST00000584014 PIGBQ92521 554 aa10.97□□□□□ -0.65
ERBB2-216ENST00000584014 ITGB4P16144 1822 aa10.97□□□□□ -0.65
ERBB2-216ENST00000584014 TOGARAM1Q9Y4F4 1720 aa10.96□□□□□ -0.65
ERBB2-216ENST00000584014 KDM6AO15550 1401 aaPredicted RBP10.96□□□□□ -0.65
ERBB2-216ENST00000584014 ERVV-2B6SEH9 535 aa10.96□□□□□ -0.65
ERBB2-216ENST00000584014 KCNQ4P56696 695 aa10.96□□□□□ -0.65
ERBB2-216ENST00000584014 CCDC125Q86Z20 511 aa10.96□□□□□ -0.65
ERBB2-216ENST00000584014 RBM42Q9BTD8 480 aaKnown RBP10.96□□□□□ -0.65
ERBB2-216ENST00000584014 BTAF1O14981 1849 aa10.95□□□□□ -0.66
ERBB2-216ENST00000584014 SCN11AQ9UI33 1791 aa10.95□□□□□ -0.66
ERBB2-216ENST00000584014 NHSQ6T4R5 1651 aa10.95□□□□□ -0.66
ERBB2-216ENST00000584014 LMOD3Q0VAK6 560 aa10.95□□□□□ -0.66
ERBB2-216ENST00000584014 SLC39A6Q13433 755 aa10.95□□□□□ -0.66
ERBB2-216ENST00000584014 EZH2Q15910 746 aaKnown RBP10.95□□□□□ -0.66
ERBB2-216ENST00000584014 SLC52A2Q9HAB3 445 aa10.95□□□□□ -0.66
ERBB2-216ENST00000584014 MIS18AQ9NYP9 233 aa10.95□□□□□ -0.66
ERBB2-216ENST00000584014 ASAP1Q9ULH1 1129 aa10.95□□□□□ -0.66
ERBB2-216ENST00000584014 PLEKHG2Q9H7P9 1386 aa10.94□□□□□ -0.66
ERBB2-216ENST00000584014 BTBD11A6QL63 1104 aa10.94□□□□□ -0.66
ERBB2-216ENST00000584014 PTCD1O75127 700 aaKnown RBP10.94□□□□□ -0.66
ERBB2-216ENST00000584014 TNS1Q9HBL0 1735 aaKnown RBP10.93□□□□□ -0.66
ERBB2-216ENST00000584014 HTATSF1O43719 755 aaKnown RBP10.93□□□□□ -0.66
ERBB2-216ENST00000584014 TTC5Q8N0Z6 440 aa10.93□□□□□ -0.66
ERBB2-216ENST00000584014 ATG3Q9NT62 314 aa10.93□□□□□ -0.66
ERBB2-216ENST00000584014 TAF7Q15545 349 aaPredicted RBP10.92□□□□□ -0.66
ERBB2-216ENST00000584014 TXNRD1Q16881 649 aa10.92□□□□□ -0.66
ERBB2-216ENST00000584014 SMARCC1Q92922 1105 aaPredicted RBP10.92□□□□□ -0.66
ERBB2-216ENST00000584014 CCNL1Q9UK58 526 aaPredicted RBP10.92□□□□□ -0.66
ERBB2-216ENST00000584014 TRIM35Q9UPQ4 493 aa10.92□□□□□ -0.66
ERBB2-216ENST00000584014 BCL9O00512 1426 aa10.92□□□□□ -0.66
ERBB2-216ENST00000584014 PALLDQ8WX93 1383 aa10.91□□□□□ -0.66
ERBB2-216ENST00000584014 KCNQ3O43525 872 aa10.91□□□□□ -0.66
ERBB2-216ENST00000584014 ATP6V1AP38606 617 aa10.91□□□□□ -0.66
ERBB2-216ENST00000584014 TSPYL4Q9UJ04 414 aa10.91□□□□□ -0.66
ERBB2-216ENST00000584014 U3KPZ7 1027 aaPredicted RBP10.91□□□□□ -0.66
ERBB2-216ENST00000584014 PLSCR1O15162 318 aa10.9□□□□□ -0.66
ERBB2-216ENST00000584014 HNRNPUQ00839 825 aaKnown RBP eCLIP10.9□□□□□ -0.66
ERBB2-216ENST00000584014 YTHDC1Q96MU7 727 aaKnown RBP10.9□□□□□ -0.66
ERBB2-216ENST00000584014 CAMKK2Q96RR4 588 aa10.9□□□□□ -0.66
ERBB2-216ENST00000584014 LOC102724428A0A0B4J2F2 783 aa10.89□□□□□ -0.67
ERBB2-216ENST00000584014 SIK1P57059 783 aa10.89□□□□□ -0.67
ERBB2-216ENST00000584014 TULP1O00294 542 aaPredicted RBP10.88□□□□□ -0.67
ERBB2-216ENST00000584014 CALD1Q05682 793 aaKnown RBP10.88□□□□□ -0.67
ERBB2-216ENST00000584014 ZNF790Q6PG37 636 aa10.88□□□□□ -0.67
ERBB2-216ENST00000584014 PROM2Q8N271 834 aa10.88□□□□□ -0.67
ERBB2-216ENST00000584014 CEMIPQ8WUJ3 1361 aa10.88□□□□□ -0.67
ERBB2-216ENST00000584014 NBPF14Q5TI25 921 aa10.87□□□□□ -0.67
ERBB2-216ENST00000584014 WWC1Q8IX03 1113 aa10.87□□□□□ -0.67
ERBB2-216ENST00000584014 ZNF496Q96IT1 587 aaPredicted RBP10.87□□□□□ -0.67
ERBB2-216ENST00000584014 FMNL2Q96PY5 1086 aa10.87□□□□□ -0.67
ERBB2-216ENST00000584014 LRRC4BQ9NT99 713 aa10.87□□□□□ -0.67
ERBB2-216ENST00000584014 ADAMTS7Q9UKP4 1686 aa10.86□□□□□ -0.67
ERBB2-216ENST00000584014 SIPA1L3O60292 1781 aaPredicted RBP10.86□□□□□ -0.67
ERBB2-216ENST00000584014 PSDA5PKW4 1024 aaPredicted RBP10.86□□□□□ -0.67
ERBB2-216ENST00000584014 GNAI1P63096 354 aa10.86□□□□□ -0.67
ERBB2-216ENST00000584014 DNAJC10Q8IXB1 793 aa10.86□□□□□ -0.67
ERBB2-216ENST00000584014 TSR2Q969E8 191 aaKnown RBP10.86□□□□□ -0.67
ERBB2-216ENST00000584014 STK32BQ9NY57 414 aa10.86□□□□□ -0.67
ERBB2-216ENST00000584014 ZNF330Q9Y3S2 320 aaPredicted RBP10.86□□□□□ -0.67
ERBB2-216ENST00000584014 LY75O60449 1722 aa10.85□□□□□ -0.67
ERBB2-216ENST00000584014 ELL2O00472 640 aaPredicted RBP10.85□□□□□ -0.67
ERBB2-216ENST00000584014 ITPK1Q13572 414 aa10.85□□□□□ -0.67
ERBB2-216ENST00000584014 SLC27A3Q5K4L6 730 aa10.85□□□□□ -0.67
ERBB2-216ENST00000584014 NECTIN2Q92692 538 aa10.85□□□□□ -0.67
ERBB2-216ENST00000584014 AK7Q96M32 723 aa10.85□□□□□ -0.67
ERBB2-216ENST00000584014 SLC4A9Q96Q91 983 aa10.85□□□□□ -0.67
ERBB2-216ENST00000584014 MBIPQ9NS73 344 aa10.85□□□□□ -0.67
ERBB2-216ENST00000584014 TFCP2L1Q9NZI6 479 aa10.85□□□□□ -0.67
ERBB2-216ENST00000584014 MRC1P22897 1456 aa10.85□□□□□ -0.67
ERBB2-216ENST00000584014 PRAMEF22A3QJZ6 481 aa10.84□□□□□ -0.67
ERBB2-216ENST00000584014 PHF14O94880 888 aa10.84□□□□□ -0.67
ERBB2-216ENST00000584014 EIF2S2P20042 333 aaKnown RBP10.84□□□□□ -0.67
ERBB2-216ENST00000584014 R3HDM1Q15032 1099 aaKnown RBP10.84□□□□□ -0.67
ERBB2-216ENST00000584014 CCDC27Q2M243 656 aa10.84□□□□□ -0.67
ERBB2-216ENST00000584014 KRT24Q2M2I5 525 aa10.84□□□□□ -0.67
ERBB2-216ENST00000584014 SMIM5Q71RC9 77 aa10.84□□□□□ -0.67
ERBB2-216ENST00000584014 LINC00116Q8NCU8 138 aa10.84□□□□□ -0.67
ERBB2-216ENST00000584014 CFAP44Q96MT7 982 aa10.84□□□□□ -0.67
ERBB2-216ENST00000584014 HEG1Q9ULI3 1381 aa10.83□□□□□ -0.68
ERBB2-216ENST00000584014 CHL1O00533 1208 aa10.83□□□□□ -0.68
ERBB2-216ENST00000584014 GNPATO15228 680 aa10.83□□□□□ -0.68
ERBB2-216ENST00000584014 SNRPA1P09661 255 aaKnown RBP10.83□□□□□ -0.68
ERBB2-216ENST00000584014 CANXP27824 592 aaKnown RBP10.83□□□□□ -0.68
ERBB2-216ENST00000584014 PIP4K2AP48426 406 aaPredicted RBP10.83□□□□□ -0.68
ERBB2-216ENST00000584014 EIF4A1P60842 406 aaKnown RBP10.83□□□□□ -0.68
ERBB2-216ENST00000584014 WDR63Q8IWG1 891 aa10.83□□□□□ -0.68
ERBB2-216ENST00000584014 NGEFQ8N5V2 710 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms