RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 TAF7Q15545 349 aaPredicted RBP15.22■□□□□ 0.03
CDRT1-207ENST00000583965 THUMPD2Q9BTF0 503 aaKnown RBP15.22■□□□□ 0.03
CDRT1-207ENST00000583965 BABAM1Q9NWV8 329 aa15.22■□□□□ 0.03
CDRT1-207ENST00000583965 GNAI1P63096 354 aa15.21■□□□□ 0.03
CDRT1-207ENST00000583965 GOLGA2Q08379 1002 aa15.21■□□□□ 0.03
CDRT1-207ENST00000583965 YTHDC1Q96MU7 727 aaKnown RBP15.21■□□□□ 0.03
CDRT1-207ENST00000583965 IFT57Q9NWB7 429 aa15.21■□□□□ 0.03
CDRT1-207ENST00000583965 TMOD3Q9NYL9 352 aa15.21■□□□□ 0.03
CDRT1-207ENST00000583965 TNS1Q9HBL0 1735 aaKnown RBP15.2■□□□□ 0.02
CDRT1-207ENST00000583965 FAM182BQ5T319 152 aa15.2■□□□□ 0.02
CDRT1-207ENST00000583965 NFATC2IPQ8NCF5 419 aa15.2■□□□□ 0.02
CDRT1-207ENST00000583965 CFAP44Q96MT7 982 aa15.2■□□□□ 0.02
CDRT1-207ENST00000583965 CACNA1FO60840 1977 aa15.19■□□□□ 0.02
CDRT1-207ENST00000583965 ZNF853P0CG23 659 aa15.19■□□□□ 0.02
CDRT1-207ENST00000583965 PRIM1P49642 420 aaKnown RBP15.19■□□□□ 0.02
CDRT1-207ENST00000583965 LY75O60449 1722 aa15.19■□□□□ 0.02
CDRT1-207ENST00000583965 E9PSI1 815 aa15.18■□□□□ 0.02
CDRT1-207ENST00000583965 CHL1O00533 1208 aa15.18■□□□□ 0.02
CDRT1-207ENST00000583965 SYTL4Q96C24 671 aaPredicted RBP15.18■□□□□ 0.02
CDRT1-207ENST00000583965 ACSBG1Q96GR2 724 aa15.18■□□□□ 0.02
CDRT1-207ENST00000583965 ZNF831Q5JPB2 1677 aa15.18■□□□□ 0.02
CDRT1-207ENST00000583965 RGPD3A6NKT7 1758 aaPredicted RBP15.18■□□□□ 0.02
CDRT1-207ENST00000583965 RGPD4Q7Z3J3 1758 aa15.18■□□□□ 0.02
CDRT1-207ENST00000583965 BTBD11A6QL63 1104 aa15.17■□□□□ 0.02
CDRT1-207ENST00000583965 PIGBQ92521 554 aa15.17■□□□□ 0.02
CDRT1-207ENST00000583965 BCL11BQ9C0K0 894 aaPredicted RBP15.17■□□□□ 0.02
CDRT1-207ENST00000583965 MYH16Q9H6N6 1097 aa15.17■□□□□ 0.02
CDRT1-207ENST00000583965 TSPYL4Q9UJ04 414 aa15.17■□□□□ 0.02
CDRT1-207ENST00000583965 SLFN5Q08AF3 891 aa15.16■□□□□ 0.02
CDRT1-207ENST00000583965 LAS1LQ9Y4W2 734 aaKnown RBP15.16■□□□□ 0.02
CDRT1-207ENST00000583965 CICQ96RK0 1608 aaPredicted RBP15.16■□□□□ 0.02
CDRT1-207ENST00000583965 LAMB4A4D0S4 1761 aa15.16■□□□□ 0.02
CDRT1-207ENST00000583965 KCNQ2O43526 872 aa15.15■□□□□ 0.02
CDRT1-207ENST00000583965 TAF1LQ8IZX4 1826 aa15.15■□□□□ 0.02
CDRT1-207ENST00000583965 ZNF790Q6PG37 636 aa15.14■□□□□ 0.01
CDRT1-207ENST00000583965 TRMT2AQ8IZ69 625 aaKnown RBP15.14■□□□□ 0.01
CDRT1-207ENST00000583965 TTC5Q8N0Z6 440 aa15.14■□□□□ 0.01
CDRT1-207ENST00000583965 SMARCC1Q92922 1105 aaPredicted RBP15.14■□□□□ 0.01
CDRT1-207ENST00000583965 MBIPQ9NS73 344 aa15.14■□□□□ 0.01
CDRT1-207ENST00000583965 FANCIQ9NVI1 1328 aa15.14■□□□□ 0.01
CDRT1-207ENST00000583965 KCPQ6ZWJ8 1503 aa15.13■□□□□ 0.01
CDRT1-207ENST00000583965 C5P01031 1676 aa15.13■□□□□ 0.01
CDRT1-207ENST00000583965 TRIM37O94972 964 aa15.13■□□□□ 0.01
CDRT1-207ENST00000583965 CDCA7LQ96GN5 454 aa15.13■□□□□ 0.01
CDRT1-207ENST00000583965 SPINK5Q9NQ38 1064 aaPredicted RBP15.13■□□□□ 0.01
CDRT1-207ENST00000583965 MIS18AQ9NYP9 233 aa15.13■□□□□ 0.01
CDRT1-207ENST00000583965 SLC39A6Q13433 755 aa15.12■□□□□ 0.01
CDRT1-207ENST00000583965 DUSP27Q5VZP5 1158 aa15.12■□□□□ 0.01
CDRT1-207ENST00000583965 ATG3Q9NT62 314 aa15.12■□□□□ 0.01
CDRT1-207ENST00000583965 ASAP1Q9ULH1 1129 aa15.12■□□□□ 0.01
CDRT1-207ENST00000583965 COL5A3P25940 1745 aaPredicted RBP15.12■□□□□ 0.01
CDRT1-207ENST00000583965 TSR2Q969E8 191 aaKnown RBP15.11■□□□□ 0.01
CDRT1-207ENST00000583965 FMNL2Q96PY5 1086 aa15.11■□□□□ 0.01
CDRT1-207ENST00000583965 TJP1Q07157 1748 aa15.11■□□□□ 0.01
CDRT1-207ENST00000583965 SOS1Q07889 1333 aaPredicted RBP15.11■□□□□ 0.01
CDRT1-207ENST00000583965 PALLDQ8WX93 1383 aa15.11■□□□□ 0.01
CDRT1-207ENST00000583965 EIF4A1P60842 406 aaKnown RBP15.1■□□□□ 0.01
CDRT1-207ENST00000583965 PTF1AQ7RTS3 328 aa15.1■□□□□ 0.01
CDRT1-207ENST00000583965 HEG1Q9ULI3 1381 aa15.1■□□□□ 0.01
CDRT1-207ENST00000583965 KCNQ3O43525 872 aa15.09■□□□□ 0.01
CDRT1-207ENST00000583965 CCDC125Q86Z20 511 aa15.09■□□□□ 0.01
CDRT1-207ENST00000583965 VSIG10Q8N0Z9 540 aa15.09■□□□□ 0.01
CDRT1-207ENST00000583965 PLSCR1O15162 318 aa15.08■□□□□ 0
CDRT1-207ENST00000583965 HOXB7P09629 217 aa15.08■□□□□ 0
CDRT1-207ENST00000583965 ZNF496Q96IT1 587 aaPredicted RBP15.08■□□□□ 0
CDRT1-207ENST00000583965 PTCD1O75127 700 aaKnown RBP15.07■□□□□ 0
CDRT1-207ENST00000583965 CT47B1P0C2W7 299 aaPredicted RBP15.07■□□□□ 0
CDRT1-207ENST00000583965 HMGB2P26583 209 aaKnown RBP15.07■□□□□ 0
CDRT1-207ENST00000583965 SF3B2Q13435 895 aaKnown RBP15.07■□□□□ 0
CDRT1-207ENST00000583965 RBM42Q9BTD8 480 aaKnown RBP15.07■□□□□ 0
CDRT1-207ENST00000583965 CHMP4AQ9BY43 222 aa15.07■□□□□ 0
CDRT1-207ENST00000583965 MYH14Q7Z406 1995 aaKnown RBP15.07■□□□□ 0
CDRT1-207ENST00000583965 RREB1Q92766 1687 aa15.06■□□□□ 0
CDRT1-207ENST00000583965 LOC102724428A0A0B4J2F2 783 aa15.06■□□□□ 0
CDRT1-207ENST00000583965 GIGYF1O75420 1035 aaPredicted RBP15.06■□□□□ 0
CDRT1-207ENST00000583965 APBA3O96018 575 aa15.06■□□□□ 0
CDRT1-207ENST00000583965 SNRPA1P09661 255 aaKnown RBP15.06■□□□□ 0
CDRT1-207ENST00000583965 SIK1P57059 783 aa15.06■□□□□ 0
CDRT1-207ENST00000583965 EXOSC9Q06265 439 aaKnown RBP15.06■□□□□ 0
CDRT1-207ENST00000583965 TEX13AQ9BXU3 409 aaPredicted RBP15.06■□□□□ 0
CDRT1-207ENST00000583965 TWISTNBQ3B726 338 aaPredicted RBP15.05■□□□□ -0
CDRT1-207ENST00000583965 C8orf58Q8NAV2 365 aa15.05■□□□□ -0
CDRT1-207ENST00000583965 SLC27A3Q5K4L6 730 aa15.04■□□□□ -0
CDRT1-207ENST00000583965 ZNF428Q96B54 188 aa15.04■□□□□ -0
CDRT1-207ENST00000583965 ATP6V1AP38606 617 aa15.03■□□□□ -0
CDRT1-207ENST00000583965 BAG6P46379 1132 aa15.03■□□□□ -0
CDRT1-207ENST00000583965 KRT24Q2M2I5 525 aa15.03■□□□□ -0
CDRT1-207ENST00000583965 TSPYL6Q8N831 410 aa15.03■□□□□ -0
CDRT1-207ENST00000583965 C4BP0C0L5 1744 aa15.03■□□□□ -0
CDRT1-207ENST00000583965 VAMP4O75379 141 aa15.02■□□□□ -0
CDRT1-207ENST00000583965 SLC4A9Q96Q91 983 aa15.02■□□□□ -0
CDRT1-207ENST00000583965 CCNL1Q9UK58 526 aaPredicted RBP15.02■□□□□ -0
CDRT1-207ENST00000583965 NUP188Q5SRE5 1749 aa15.02□□□□□ -0.01
CDRT1-207ENST00000583965 UBR3Q6ZT12 1888 aa15.01□□□□□ -0.01
CDRT1-207ENST00000583965 ELL2O00472 640 aaPredicted RBP15.01□□□□□ -0.01
CDRT1-207ENST00000583965 STARD3NLO95772 234 aa15.01□□□□□ -0.01
CDRT1-207ENST00000583965 TXNRD1Q16881 649 aa15.01□□□□□ -0.01
CDRT1-207ENST00000583965 ILDR2Q71H61 639 aa15.01□□□□□ -0.01
CDRT1-207ENST00000583965 ERBB4Q15303 1308 aa15□□□□□ -0.01
CDRT1-207ENST00000583965 HDGFL1Q5TGJ6 251 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms