RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 FAM161AQ3B820 660 aa15.81■□□□□ 0.12
GGA3-217ENST00000583667 SMC1BQ8NDV3 1235 aa15.81■□□□□ 0.12
GGA3-217ENST00000583667 RRAGCQ9HB90 399 aa15.81■□□□□ 0.12
GGA3-217ENST00000583667 POLKQ9UBT6 870 aa15.81■□□□□ 0.12
GGA3-217ENST00000583667 TNNT2P45379 298 aaPredicted RBP15.8■□□□□ 0.12
GGA3-217ENST00000583667 AMIGO3Q86WK7 504 aa15.8■□□□□ 0.12
GGA3-217ENST00000583667 ANKRD24Q8TF21 1146 aa15.8■□□□□ 0.12
GGA3-217ENST00000583667 BCS1LQ9Y276 419 aa15.8■□□□□ 0.12
GGA3-217ENST00000583667 COL3A1P02461 1466 aaPredicted RBP15.79■□□□□ 0.12
GGA3-217ENST00000583667 C9orf131Q5VYM1 1079 aa15.79■□□□□ 0.12
GGA3-217ENST00000583667 SMIM5Q71RC9 77 aa15.79■□□□□ 0.12
GGA3-217ENST00000583667 KDM2BQ8NHM5 1336 aa15.78■□□□□ 0.12
GGA3-217ENST00000583667 NUDCQ9Y266 331 aa15.78■□□□□ 0.12
GGA3-217ENST00000583667 USP54Q70EL1 1684 aa15.77■□□□□ 0.12
GGA3-217ENST00000583667 KCPQ6ZWJ8 1503 aa15.77■□□□□ 0.11
GGA3-217ENST00000583667 C10orf71Q711Q0 1435 aa15.77■□□□□ 0.11
GGA3-217ENST00000583667 A0A0G2JLW4 131 aa15.76■□□□□ 0.11
GGA3-217ENST00000583667 PXDNLA1KZ92 1463 aa15.76■□□□□ 0.11
GGA3-217ENST00000583667 HMGB2P26583 209 aaKnown RBP15.75■□□□□ 0.11
GGA3-217ENST00000583667 TGFB2P61812 414 aa15.75■□□□□ 0.11
GGA3-217ENST00000583667 KIF24Q5T7B8 1368 aa15.75■□□□□ 0.11
GGA3-217ENST00000583667 PLEKHG2Q9H7P9 1386 aa15.75■□□□□ 0.11
GGA3-217ENST00000583667 DOT1LQ8TEK3 1739 aa15.74■□□□□ 0.11
GGA3-217ENST00000583667 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.74■□□□□ 0.11
GGA3-217ENST00000583667 DIAPH1O60610 1272 aaKnown RBP15.74■□□□□ 0.11
GGA3-217ENST00000583667 PHF14O94880 888 aa15.74■□□□□ 0.11
GGA3-217ENST00000583667 RUNDC1Q96C34 613 aa15.74■□□□□ 0.11
GGA3-217ENST00000583667 PRDM10Q9NQV6 1147 aa15.74■□□□□ 0.11
GGA3-217ENST00000583667 C5P01031 1676 aa15.73■□□□□ 0.11
GGA3-217ENST00000583667 ZNF521Q96K83 1311 aa15.73■□□□□ 0.11
GGA3-217ENST00000583667 FOXN1O15353 648 aa15.73■□□□□ 0.11
GGA3-217ENST00000583667 PNNQ9H307 717 aaKnown RBP15.73■□□□□ 0.11
GGA3-217ENST00000583667 FCHSD2O94868 740 aa15.72■□□□□ 0.11
GGA3-217ENST00000583667 ZCRB1Q8TBF4 217 aaKnown RBP15.72■□□□□ 0.11
GGA3-217ENST00000583667 AK7Q96M32 723 aa15.72■□□□□ 0.11
GGA3-217ENST00000583667 MAP2P11137 1827 aaKnown RBP15.71■□□□□ 0.11
GGA3-217ENST00000583667 CCDC27Q2M243 656 aa15.71■□□□□ 0.11
GGA3-217ENST00000583667 DPEP1P16444 411 aa15.7■□□□□ 0.1
GGA3-217ENST00000583667 IL13P35225 146 aa15.7■□□□□ 0.1
GGA3-217ENST00000583667 KIAA1551Q9HCM1 1747 aa15.69■□□□□ 0.1
GGA3-217ENST00000583667 APAF1O14727 1248 aa15.69■□□□□ 0.1
GGA3-217ENST00000583667 MMP10P09238 476 aa15.69■□□□□ 0.1
GGA3-217ENST00000583667 U2AF1L5P0DN76 240 aaPredicted RBP15.69■□□□□ 0.1
GGA3-217ENST00000583667 U2AF1Q01081 240 aaKnown RBP eCLIP15.69■□□□□ 0.1
GGA3-217ENST00000583667 PLEKHF1Q96S99 279 aa15.69■□□□□ 0.1
GGA3-217ENST00000583667 RNF181Q9P0P0 153 aa15.69■□□□□ 0.1
GGA3-217ENST00000583667 GTF3C3Q9Y5Q9 886 aa15.69■□□□□ 0.1
GGA3-217ENST00000583667 EMILIN1Q9Y6C2 1016 aa15.69■□□□□ 0.1
GGA3-217ENST00000583667 N4BP2Q86UW6 1770 aaPredicted RBP15.68■□□□□ 0.1
GGA3-217ENST00000583667 PALLDQ8WX93 1383 aa15.68■□□□□ 0.1
GGA3-217ENST00000583667 SSFA2P28290 1259 aa15.68■□□□□ 0.1
GGA3-217ENST00000583667 MLLT1Q03111 559 aaPredicted RBP15.68■□□□□ 0.1
GGA3-217ENST00000583667 ABHD8Q96I13 439 aa15.68■□□□□ 0.1
GGA3-217ENST00000583667 TOGARAM1Q9Y4F4 1720 aa15.68■□□□□ 0.1
GGA3-217ENST00000583667 TAF1LQ8IZX4 1826 aa15.67■□□□□ 0.1
GGA3-217ENST00000583667 KCNA3P22001 575 aa15.67■□□□□ 0.1
GGA3-217ENST00000583667 FBLN1P23142 703 aa15.67■□□□□ 0.1
GGA3-217ENST00000583667 TRMT2AQ8IZ69 625 aaKnown RBP15.67■□□□□ 0.1
GGA3-217ENST00000583667 LTV1Q96GA3 475 aaPredicted RBP15.67■□□□□ 0.1
GGA3-217ENST00000583667 C4BP0C0L5 1744 aa15.67■□□□□ 0.1
GGA3-217ENST00000583667 VEGFAP15692 232 aaPredicted RBP15.66■□□□□ 0.1
GGA3-217ENST00000583667 MKRN1Q9UHC7 482 aaKnown RBP15.66■□□□□ 0.1
GGA3-217ENST00000583667 KIF13BQ9NQT8 1826 aa15.66■□□□□ 0.1
GGA3-217ENST00000583667 TNRC6CQ9HCJ0 1690 aaKnown RBP15.65■□□□□ 0.1
GGA3-217ENST00000583667 CTCFP49711 727 aaPredicted RBP15.65■□□□□ 0.1
GGA3-217ENST00000583667 RGS19P49795 217 aa15.65■□□□□ 0.1
GGA3-217ENST00000583667 GOLGA2Q08379 1002 aa15.65■□□□□ 0.1
GGA3-217ENST00000583667 RRS1Q15050 365 aaKnown RBP15.65■□□□□ 0.1
GGA3-217ENST00000583667 CCDC146Q8IYE0 955 aa15.65■□□□□ 0.1
GGA3-217ENST00000583667 IP6K1Q92551 441 aa15.65■□□□□ 0.1
GGA3-217ENST00000583667 PKD1L3Q7Z443 1732 aa15.65■□□□□ 0.1
GGA3-217ENST00000583667 MAP3K19Q56UN5 1328 aa15.65■□□□□ 0.1
GGA3-217ENST00000583667 FLT4P35916 1363 aa15.64■□□□□ 0.09
GGA3-217ENST00000583667 U2SURPO15042 1029 aaKnown RBP15.64■□□□□ 0.09
GGA3-217ENST00000583667 MPRIPQ6WCQ1 1025 aa15.64■□□□□ 0.09
GGA3-217ENST00000583667 UBR3Q6ZT12 1888 aa15.64■□□□□ 0.09
GGA3-217ENST00000583667 WDR63Q8IWG1 891 aa15.64■□□□□ 0.09
GGA3-217ENST00000583667 DCAF5Q96JK2 942 aa15.64■□□□□ 0.09
GGA3-217ENST00000583667 RNF123Q5XPI4 1314 aa15.64■□□□□ 0.09
GGA3-217ENST00000583667 RTL1A6NKG5 1358 aa15.63■□□□□ 0.09
GGA3-217ENST00000583667 LTN1O94822 1766 aa15.63■□□□□ 0.09
GGA3-217ENST00000583667 PPM1GO15355 546 aaPredicted RBP15.63■□□□□ 0.09
GGA3-217ENST00000583667 SLFN5Q08AF3 891 aa15.63■□□□□ 0.09
GGA3-217ENST00000583667 RSPH6AQ9H0K4 717 aa15.63■□□□□ 0.09
GGA3-217ENST00000583667 WWC1Q8IX03 1113 aa15.62■□□□□ 0.09
GGA3-217ENST00000583667 LINC00116Q8NCU8 138 aa15.62■□□□□ 0.09
GGA3-217ENST00000583667 CREBZFQ9NS37 354 aa15.62■□□□□ 0.09
GGA3-217ENST00000583667 PIM2Q9P1W9 311 aa15.62■□□□□ 0.09
GGA3-217ENST00000583667 E9PSI1 815 aa15.61■□□□□ 0.09
GGA3-217ENST00000583667 LBX1P52954 281 aa15.61■□□□□ 0.09
GGA3-217ENST00000583667 EIF4A2Q14240 407 aaKnown RBP15.61■□□□□ 0.09
GGA3-217ENST00000583667 SMARCC1Q92922 1105 aaPredicted RBP15.61■□□□□ 0.09
GGA3-217ENST00000583667 MEGF6O75095 1541 aa15.61■□□□□ 0.09
GGA3-217ENST00000583667 GLTPD2A6NH11 291 aa15.6■□□□□ 0.09
GGA3-217ENST00000583667 HSP90AB2PQ58FF8 381 aa15.6■□□□□ 0.09
GGA3-217ENST00000583667 DALRD3Q5D0E6 543 aaKnown RBP15.6■□□□□ 0.09
GGA3-217ENST00000583667 ERICH6BQ5W0A0 696 aa15.6■□□□□ 0.09
GGA3-217ENST00000583667 NLGN1Q8N2Q7 840 aa15.6■□□□□ 0.09
GGA3-217ENST00000583667 AIDAQ96BJ3 306 aa15.6■□□□□ 0.09
GGA3-217ENST00000583667 CDCA7LQ96GN5 454 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms