RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 SALL2Q9Y467 1007 aaPredicted RBP18.45■□□□□ 0.54
GGA3-216ENST00000583282 KDM3BQ7LBC6 1761 aa18.45■□□□□ 0.54
GGA3-216ENST00000583282 NUP188Q5SRE5 1749 aa18.44■□□□□ 0.54
GGA3-216ENST00000583282 ERVV-2B6SEH9 535 aa18.44■□□□□ 0.54
GGA3-216ENST00000583282 LMOD3Q0VAK6 560 aa18.44■□□□□ 0.54
GGA3-216ENST00000583282 DEFB132Q7Z7B7 95 aa18.44■□□□□ 0.54
GGA3-216ENST00000583282 PIGBQ92521 554 aa18.44■□□□□ 0.54
GGA3-216ENST00000583282 SLC52A2Q9HAB3 445 aa18.44■□□□□ 0.54
GGA3-216ENST00000583282 PALLDQ8WX93 1383 aa18.43■□□□□ 0.54
GGA3-216ENST00000583282 UBR2Q8IWV8 1755 aa18.43■□□□□ 0.54
GGA3-216ENST00000583282 BAG6P46379 1132 aa18.43■□□□□ 0.54
GGA3-216ENST00000583282 NFATC2IPQ8NCF5 419 aa18.42■□□□□ 0.54
GGA3-216ENST00000583282 HTATSF1O43719 755 aaKnown RBP18.41■□□□□ 0.54
GGA3-216ENST00000583282 EN1Q05925 392 aaPredicted RBP18.41■□□□□ 0.54
GGA3-216ENST00000583282 TRIM35Q9UPQ4 493 aa18.41■□□□□ 0.54
GGA3-216ENST00000583282 C5P01031 1676 aa18.41■□□□□ 0.54
GGA3-216ENST00000583282 KCPQ6ZWJ8 1503 aa18.4■□□□□ 0.54
GGA3-216ENST00000583282 ASAP1Q9ULH1 1129 aa18.4■□□□□ 0.54
GGA3-216ENST00000583282 TJP1Q07157 1748 aa18.4■□□□□ 0.54
GGA3-216ENST00000583282 SOCS7O14512 581 aa18.39■□□□□ 0.53
GGA3-216ENST00000583282 SLC39A6Q13433 755 aa18.39■□□□□ 0.53
GGA3-216ENST00000583282 EZH2Q15910 746 aaKnown RBP18.38■□□□□ 0.53
GGA3-216ENST00000583282 CCDC125Q86Z20 511 aa18.38■□□□□ 0.53
GGA3-216ENST00000583282 ATG3Q9NT62 314 aa18.37■□□□□ 0.53
GGA3-216ENST00000583282 LAS1LQ9Y4W2 734 aaKnown RBP18.37■□□□□ 0.53
GGA3-216ENST00000583282 TAF1LQ8IZX4 1826 aa18.37■□□□□ 0.53
GGA3-216ENST00000583282 BTBD11A6QL63 1104 aa18.36■□□□□ 0.53
GGA3-216ENST00000583282 LAMB4A4D0S4 1761 aa18.35■□□□□ 0.53
GGA3-216ENST00000583282 COL5A3P25940 1745 aaPredicted RBP18.35■□□□□ 0.53
GGA3-216ENST00000583282 KCNQ4P56696 695 aa18.35■□□□□ 0.53
GGA3-216ENST00000583282 TTC5Q8N0Z6 440 aa18.35■□□□□ 0.53
GGA3-216ENST00000583282 SMARCC1Q92922 1105 aaPredicted RBP18.35■□□□□ 0.53
GGA3-216ENST00000583282 RBM42Q9BTD8 480 aaKnown RBP18.35■□□□□ 0.53
GGA3-216ENST00000583282 MIS18AQ9NYP9 233 aa18.35■□□□□ 0.53
GGA3-216ENST00000583282 CICQ96RK0 1608 aaPredicted RBP18.34■□□□□ 0.53
GGA3-216ENST00000583282 KCNQ3O43525 872 aa18.34■□□□□ 0.53
GGA3-216ENST00000583282 PTCD1O75127 700 aaKnown RBP18.34■□□□□ 0.53
GGA3-216ENST00000583282 CCNL1Q9UK58 526 aaPredicted RBP18.34■□□□□ 0.53
GGA3-216ENST00000583282 HNRNPUQ00839 825 aaKnown RBP eCLIP18.33■□□□□ 0.52
GGA3-216ENST00000583282 TAF7Q15545 349 aaPredicted RBP18.33■□□□□ 0.52
GGA3-216ENST00000583282 TXNRD1Q16881 649 aa18.33■□□□□ 0.52
GGA3-216ENST00000583282 WWC1Q8IX03 1113 aa18.33■□□□□ 0.52
GGA3-216ENST00000583282 CAMKK2Q96RR4 588 aa18.33■□□□□ 0.52
GGA3-216ENST00000583282 TSPYL4Q9UJ04 414 aa18.33■□□□□ 0.52
GGA3-216ENST00000583282 ZNF831Q5JPB2 1677 aa18.33■□□□□ 0.52
GGA3-216ENST00000583282 TUBGCP6Q96RT7 1819 aa18.33■□□□□ 0.52
GGA3-216ENST00000583282 C4BP0C0L5 1744 aa18.32■□□□□ 0.52
GGA3-216ENST00000583282 LOC102724428A0A0B4J2F2 783 aa18.32■□□□□ 0.52
GGA3-216ENST00000583282 PLSCR1O15162 318 aa18.32■□□□□ 0.52
GGA3-216ENST00000583282 SIK1P57059 783 aa18.32■□□□□ 0.52
GGA3-216ENST00000583282 CCDC27Q2M243 656 aa18.32■□□□□ 0.52
GGA3-216ENST00000583282 ZNF790Q6PG37 636 aa18.32■□□□□ 0.52
GGA3-216ENST00000583282 CALD1Q05682 793 aaKnown RBP18.3■□□□□ 0.52
GGA3-216ENST00000583282 ATP6V1AP38606 617 aa18.29■□□□□ 0.52
GGA3-216ENST00000583282 ZNF496Q96IT1 587 aaPredicted RBP18.29■□□□□ 0.52
GGA3-216ENST00000583282 LRRC4BQ9NT99 713 aa18.29■□□□□ 0.52
GGA3-216ENST00000583282 HEG1Q9ULI3 1381 aa18.29■□□□□ 0.52
GGA3-216ENST00000583282 SLC27A3Q5K4L6 730 aa18.28■□□□□ 0.52
GGA3-216ENST00000583282 PROM2Q8N271 834 aa18.28■□□□□ 0.52
GGA3-216ENST00000583282 SLC4A9Q96Q91 983 aa18.28■□□□□ 0.52
GGA3-216ENST00000583282 IFT57Q9NWB7 429 aa18.28■□□□□ 0.52
GGA3-216ENST00000583282 ITPK1Q13572 414 aa18.27■□□□□ 0.52
GGA3-216ENST00000583282 TSR2Q969E8 191 aaKnown RBP18.27■□□□□ 0.52
GGA3-216ENST00000583282 FMNL2Q96PY5 1086 aa18.27■□□□□ 0.52
GGA3-216ENST00000583282 ANO8Q9HCE9 1232 aaPredicted RBP18.27■□□□□ 0.52
GGA3-216ENST00000583282 MBIPQ9NS73 344 aa18.27■□□□□ 0.52
GGA3-216ENST00000583282 ZNF521Q96K83 1311 aa18.26■□□□□ 0.51
GGA3-216ENST00000583282 GNAI1P63096 354 aa18.26■□□□□ 0.51
GGA3-216ENST00000583282 NCBP3Q53F19 620 aaKnown RBP18.26■□□□□ 0.51
GGA3-216ENST00000583282 DNAJC10Q8IXB1 793 aa18.26■□□□□ 0.51
GGA3-216ENST00000583282 NGEFQ8N5V2 710 aa18.26■□□□□ 0.51
GGA3-216ENST00000583282 LINC00116Q8NCU8 138 aa18.26■□□□□ 0.51
GGA3-216ENST00000583282 CFAP44Q96MT7 982 aa18.26■□□□□ 0.51
GGA3-216ENST00000583282 KRT24Q2M2I5 525 aa18.25■□□□□ 0.51
GGA3-216ENST00000583282 FANCIQ9NVI1 1328 aa18.24■□□□□ 0.51
GGA3-216ENST00000583282 UBR3Q6ZT12 1888 aa18.24■□□□□ 0.51
GGA3-216ENST00000583282 PRAMEF22A3QJZ6 481 aa18.24■□□□□ 0.51
GGA3-216ENST00000583282 CHL1O00533 1208 aa18.24■□□□□ 0.51
GGA3-216ENST00000583282 EIF4A1P60842 406 aaKnown RBP18.24■□□□□ 0.51
GGA3-216ENST00000583282 YTHDC1Q96MU7 727 aaKnown RBP18.24■□□□□ 0.51
GGA3-216ENST00000583282 IL16Q14005 1332 aa18.23■□□□□ 0.51
GGA3-216ENST00000583282 MYH14Q7Z406 1995 aaKnown RBP18.23■□□□□ 0.51
GGA3-216ENST00000583282 ZNF853P0CG23 659 aa18.23■□□□□ 0.51
GGA3-216ENST00000583282 ZNF827Q17R98 1081 aa18.23■□□□□ 0.51
GGA3-216ENST00000583282 WDR63Q8IWG1 891 aa18.23■□□□□ 0.51
GGA3-216ENST00000583282 SPINK5Q9NQ38 1064 aaPredicted RBP18.23■□□□□ 0.51
GGA3-216ENST00000583282 QSER1Q2KHR3 1735 aa18.23■□□□□ 0.51
GGA3-216ENST00000583282 BABAM1Q9NWV8 329 aa18.22■□□□□ 0.51
GGA3-216ENST00000583282 C4AP0C0L4 1744 aa18.22■□□□□ 0.51
GGA3-216ENST00000583282 AK7Q96M32 723 aa18.21■□□□□ 0.51
GGA3-216ENST00000583282 STK32BQ9NY57 414 aa18.21■□□□□ 0.51
GGA3-216ENST00000583282 SNRPA1P09661 255 aaKnown RBP18.2■□□□□ 0.5
GGA3-216ENST00000583282 GOLGA2Q08379 1002 aa18.2■□□□□ 0.5
GGA3-216ENST00000583282 VSIG10Q8N0Z9 540 aa18.2■□□□□ 0.5
GGA3-216ENST00000583282 ZBED9Q6R2W3 1325 aa18.2■□□□□ 0.5
GGA3-216ENST00000583282 GNPATO15228 680 aa18.19■□□□□ 0.5
GGA3-216ENST00000583282 PHF14O94880 888 aa18.19■□□□□ 0.5
GGA3-216ENST00000583282 CRKLP46109 303 aaKnown RBP18.19■□□□□ 0.5
GGA3-216ENST00000583282 CDCA7LQ96GN5 454 aa18.19■□□□□ 0.5
GGA3-216ENST00000583282 MYH16Q9H6N6 1097 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms