RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 DTNBO60941 627 aa13.3□□□□□ -0.28
CDK5RAP3-225ENST00000582482 IL1RAPL2Q9NP60 686 aa13.3□□□□□ -0.28
CDK5RAP3-225ENST00000582482 CABLES1Q8TDN4 633 aa13.29□□□□□ -0.28
CDK5RAP3-225ENST00000582482 MAP3K5Q99683 1374 aa13.29□□□□□ -0.28
CDK5RAP3-225ENST00000582482 RBM25P49756 843 aaKnown RBP13.29□□□□□ -0.28
CDK5RAP3-225ENST00000582482 STK31Q9BXU1 1019 aa13.29□□□□□ -0.28
CDK5RAP3-225ENST00000582482 HSP90AB1P08238 724 aaKnown RBP13.28□□□□□ -0.28
CDK5RAP3-225ENST00000582482 CHPF2Q9P2E5 772 aa13.28□□□□□ -0.28
CDK5RAP3-225ENST00000582482 PIP4K2AP48426 406 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP3-225ENST00000582482 PROSER3Q2NL68 480 aa13.28□□□□□ -0.28
CDK5RAP3-225ENST00000582482 HDGFL1Q5TGJ6 251 aa13.28□□□□□ -0.28
CDK5RAP3-225ENST00000582482 PXDNQ92626 1479 aa13.27□□□□□ -0.28
CDK5RAP3-225ENST00000582482 CDC45O75419 566 aa13.27□□□□□ -0.29
CDK5RAP3-225ENST00000582482 UNC5CLQ8IV45 518 aa13.27□□□□□ -0.29
CDK5RAP3-225ENST00000582482 PTPRCP08575 1304 aa13.27□□□□□ -0.29
CDK5RAP3-225ENST00000582482 TAF7Q15545 349 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-225ENST00000582482 NOL8Q76FK4 1167 aaKnown RBP13.27□□□□□ -0.29
CDK5RAP3-225ENST00000582482 ZNF530Q6P9A1 599 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-225ENST00000582482 NUTM1Q86Y26 1132 aa13.26□□□□□ -0.29
CDK5RAP3-225ENST00000582482 IL25Q9H293 177 aa13.26□□□□□ -0.29
CDK5RAP3-225ENST00000582482 PKP1Q13835 747 aa13.25□□□□□ -0.29
CDK5RAP3-225ENST00000582482 IP6K1Q92551 441 aa13.25□□□□□ -0.29
CDK5RAP3-225ENST00000582482 GCP02774 474 aa13.25□□□□□ -0.29
CDK5RAP3-225ENST00000582482 NBPF7P0C2Y1 421 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-225ENST00000582482 USP44Q9H0E7 712 aa13.25□□□□□ -0.29
CDK5RAP3-225ENST00000582482 CHD2O14647 1828 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-225ENST00000582482 MCM4P33991 863 aa13.24□□□□□ -0.29
CDK5RAP3-225ENST00000582482 FOXD4L5Q5VV16 416 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-225ENST00000582482 FOXD4L4Q8WXT5 416 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-225ENST00000582482 FAM208AQ9UK61 1670 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-225ENST00000582482 GNAI2P04899 355 aa13.24□□□□□ -0.29
CDK5RAP3-225ENST00000582482 HSP90AA1P07900 732 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-225ENST00000582482 SLC39A6Q13433 755 aa13.24□□□□□ -0.29
CDK5RAP3-225ENST00000582482 CCDC30Q5VVM6 783 aa13.24□□□□□ -0.29
CDK5RAP3-225ENST00000582482 RPAP2Q8IXW5 612 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-225ENST00000582482 ANKARQ7Z5J8 1434 aa13.24□□□□□ -0.29
CDK5RAP3-225ENST00000582482 SSFA2P28290 1259 aa13.23□□□□□ -0.29
CDK5RAP3-225ENST00000582482 CHRNA2Q15822 529 aa13.23□□□□□ -0.29
CDK5RAP3-225ENST00000582482 JARID2Q92833 1246 aaPredicted RBP13.23□□□□□ -0.29
CDK5RAP3-225ENST00000582482 TNPO1Q92973 898 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-225ENST00000582482 RILPL2Q969X0 211 aa13.23□□□□□ -0.29
CDK5RAP3-225ENST00000582482 NFAT5O94916 1531 aa13.23□□□□□ -0.29
CDK5RAP3-225ENST00000582482 PDE1AP54750 535 aa13.23□□□□□ -0.29
CDK5RAP3-225ENST00000582482 ANKRD24Q8TF21 1146 aa13.23□□□□□ -0.29
CDK5RAP3-225ENST00000582482 PI4KAP2A4QPH2 592 aa13.22□□□□□ -0.29
CDK5RAP3-225ENST00000582482 EIF4A1P60842 406 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-225ENST00000582482 PROSER2Q86WR7 435 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-225ENST00000582482 PI4KAP1Q8N8J0 262 aa13.22□□□□□ -0.29
CDK5RAP3-225ENST00000582482 PANK2Q9BZ23 570 aa13.22□□□□□ -0.29
CDK5RAP3-225ENST00000582482 CHMP4BQ9H444 224 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-225ENST00000582482 CHMP5Q9NZZ3 219 aa13.22□□□□□ -0.29
CDK5RAP3-225ENST00000582482 LRRC37A3O60309 1634 aa13.22□□□□□ -0.29
CDK5RAP3-225ENST00000582482 BTBD11A6QL63 1104 aa13.22□□□□□ -0.29
CDK5RAP3-225ENST00000582482 CCT4P50991 539 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-225ENST00000582482 AIMP1Q12904 312 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-225ENST00000582482 USP26Q9BXU7 913 aa13.22□□□□□ -0.29
CDK5RAP3-225ENST00000582482 HOXD11P31277 338 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP3-225ENST00000582482 HSPA2P54652 639 aa13.21□□□□□ -0.29
CDK5RAP3-225ENST00000582482 ZGPATQ8N5A5 531 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP3-225ENST00000582482 PALD1Q9ULE6 856 aa13.21□□□□□ -0.29
CDK5RAP3-225ENST00000582482 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP3-225ENST00000582482 TRIM6-TRIM34B2RNG4 842 aa13.21□□□□□ -0.29
CDK5RAP3-225ENST00000582482 DDIT3P35638 169 aa13.21□□□□□ -0.29
CDK5RAP3-225ENST00000582482 CWF19L2Q2TBE0 894 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP3-225ENST00000582482 RGPD5Q99666 1765 aa13.21□□□□□ -0.3
CDK5RAP3-225ENST00000582482 SOS1Q07889 1333 aaPredicted RBP13.21□□□□□ -0.3
CDK5RAP3-225ENST00000582482 PPP1R42Q7Z4L9 355 aa13.2□□□□□ -0.3
CDK5RAP3-225ENST00000582482 LARP6Q9BRS8 491 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-225ENST00000582482 TEFQ10587 303 aa13.2□□□□□ -0.3
CDK5RAP3-225ENST00000582482 KRT28Q7Z3Y7 464 aa13.2□□□□□ -0.3
CDK5RAP3-225ENST00000582482 PA2G4Q9UQ80 394 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-225ENST00000582482 ADGRL3Q9HAR2 1447 aa13.2□□□□□ -0.3
CDK5RAP3-225ENST00000582482 KIF24Q5T7B8 1368 aa13.19□□□□□ -0.3
CDK5RAP3-225ENST00000582482 K7ELQ4 463 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-225ENST00000582482 UBTFL1P0CB47 393 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-225ENST00000582482 TRAK2O60296 914 aa13.19□□□□□ -0.3
CDK5RAP3-225ENST00000582482 ARHGEF25Q86VW2 580 aa13.19□□□□□ -0.3
CDK5RAP3-225ENST00000582482 NPHP4O75161 1426 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-225ENST00000582482 SURF6O75683 361 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-225ENST00000582482 LRRCC1Q9C099 1032 aa13.18□□□□□ -0.3
CDK5RAP3-225ENST00000582482 NCOA3Q9Y6Q9 1424 aa13.18□□□□□ -0.3
CDK5RAP3-225ENST00000582482 ATP8B2P98198 1209 aa13.18□□□□□ -0.3
CDK5RAP3-225ENST00000582482 SRGAP3O43295 1099 aa13.17□□□□□ -0.3
CDK5RAP3-225ENST00000582482 MYL6BP14649 208 aa13.17□□□□□ -0.3
CDK5RAP3-225ENST00000582482 MX1P20591 662 aa13.17□□□□□ -0.3
CDK5RAP3-225ENST00000582482 KLHDC4Q8TBB5 520 aa13.17□□□□□ -0.3
CDK5RAP3-225ENST00000582482 SNX21Q969T3 373 aa13.17□□□□□ -0.3
CDK5RAP3-225ENST00000582482 NLRP2Q9NX02 1062 aa13.17□□□□□ -0.3
CDK5RAP3-225ENST00000582482 CEMIPQ8WUJ3 1361 aa13.17□□□□□ -0.3
CDK5RAP3-225ENST00000582482 RNMTO43148 476 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-225ENST00000582482 HMMRO75330 724 aa13.17□□□□□ -0.3
CDK5RAP3-225ENST00000582482 FOXD4L6Q3SYB3 417 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-225ENST00000582482 FOXD4L3Q6VB84 417 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-225ENST00000582482 ADCY9O60503 1353 aa13.17□□□□□ -0.3
CDK5RAP3-225ENST00000582482 HAP1P54257 671 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-225ENST00000582482 TPRNQ4KMQ1 711 aa13.16□□□□□ -0.3
CDK5RAP3-225ENST00000582482 DDX54Q8TDD1 881 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-225ENST00000582482 UPF3BQ9BZI7 483 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-225ENST00000582482 SALL3Q9BXA9 1300 aa13.16□□□□□ -0.3
CDK5RAP3-225ENST00000582482 HTATSF1O43719 755 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms