RNA–Protein interactions for RNA: ENST00000580238.5

ATG13-226, Transcript of autophagy related 13, humanhuman

TSL 4

Gene ATG13, Length 624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-226ENST00000580238 NFE2L2Q16236 605 aa22.35■■□□□ 1.17
ATG13-226ENST00000580238 PNISRQ8TF01 805 aaKnown RBP22.35■■□□□ 1.17
ATG13-226ENST00000580238 MAPK8IP3Q9UPT6 1336 aa22.34■■□□□ 1.17
ATG13-226ENST00000580238 SMARCC1Q92922 1105 aaPredicted RBP22.34■■□□□ 1.17
ATG13-226ENST00000580238 ANO8Q9HCE9 1232 aaPredicted RBP22.34■■□□□ 1.17
ATG13-226ENST00000580238 NEFMP07197 916 aa22.33■■□□□ 1.17
ATG13-226ENST00000580238 SLC27A3Q5K4L6 730 aa22.33■■□□□ 1.17
ATG13-226ENST00000580238 DCTN1Q14203 1278 aa22.32■■□□□ 1.16
ATG13-226ENST00000580238 MCM10Q7L590 875 aa22.32■■□□□ 1.16
ATG13-226ENST00000580238 RUNDC1Q96C34 613 aa22.32■■□□□ 1.16
ATG13-226ENST00000580238 CCNL1Q9UK58 526 aaPredicted RBP22.32■■□□□ 1.16
ATG13-226ENST00000580238 TAF1LQ8IZX4 1826 aa22.31■■□□□ 1.16
ATG13-226ENST00000580238 HTATSF1O43719 755 aaKnown RBP22.31■■□□□ 1.16
ATG13-226ENST00000580238 TMPOP42166 694 aaKnown RBP22.3■■□□□ 1.16
ATG13-226ENST00000580238 SLC4A9Q96Q91 983 aa22.3■■□□□ 1.16
ATG13-226ENST00000580238 C5P01031 1676 aa22.3■■□□□ 1.16
ATG13-226ENST00000580238 LOC102724428A0A0B4J2F2 783 aa22.29■■□□□ 1.16
ATG13-226ENST00000580238 SIK1P57059 783 aa22.29■■□□□ 1.16
ATG13-226ENST00000580238 ZNF831Q5JPB2 1677 aa22.28■■□□□ 1.16
ATG13-226ENST00000580238 PSDA5PKW4 1024 aaPredicted RBP22.28■■□□□ 1.16
ATG13-226ENST00000580238 SLC39A6Q13433 755 aa22.28■■□□□ 1.16
ATG13-226ENST00000580238 R3HDM1Q15032 1099 aaKnown RBP22.28■■□□□ 1.16
ATG13-226ENST00000580238 ZNF827Q17R98 1081 aa22.28■■□□□ 1.16
ATG13-226ENST00000580238 DIEXFQ68CQ4 756 aaKnown RBP22.28■■□□□ 1.16
ATG13-226ENST00000580238 RTF1Q92541 710 aaKnown RBP22.28■■□□□ 1.16
ATG13-226ENST00000580238 RRP7AQ9Y3A4 280 aaKnown RBP22.28■■□□□ 1.16
ATG13-226ENST00000580238 UBR2Q8IWV8 1755 aa22.27■■□□□ 1.16
ATG13-226ENST00000580238 TEFQ10587 303 aa22.27■■□□□ 1.16
ATG13-226ENST00000580238 NBPF14Q5TI25 921 aa22.27■■□□□ 1.16
ATG13-226ENST00000580238 KCPQ6ZWJ8 1503 aa22.26■■□□□ 1.15
ATG13-226ENST00000580238 RIPK4P57078 832 aa22.26■■□□□ 1.15
ATG13-226ENST00000580238 ITPK1Q13572 414 aa22.26■■□□□ 1.15
ATG13-226ENST00000580238 AKT1S1Q96B36 256 aa22.26■■□□□ 1.15
ATG13-226ENST00000580238 SLC15A2Q16348 729 aa22.25■■□□□ 1.15
ATG13-226ENST00000580238 THUMPD2Q9BTF0 503 aaKnown RBP22.25■■□□□ 1.15
ATG13-226ENST00000580238 TUBGCP6Q96RT7 1819 aa22.24■■□□□ 1.15
ATG13-226ENST00000580238 CICQ96RK0 1608 aaPredicted RBP22.24■■□□□ 1.15
ATG13-226ENST00000580238 PTCD1O75127 700 aaKnown RBP22.24■■□□□ 1.15
ATG13-226ENST00000580238 RBM42Q9BTD8 480 aaKnown RBP22.24■■□□□ 1.15
ATG13-226ENST00000580238 C4BP0C0L5 1744 aa22.23■■□□□ 1.15
ATG13-226ENST00000580238 COL5A3P25940 1745 aaPredicted RBP22.23■■□□□ 1.15
ATG13-226ENST00000580238 TJP1Q07157 1748 aa22.23■■□□□ 1.15
ATG13-226ENST00000580238 ATP6V1AP38606 617 aa22.23■■□□□ 1.15
ATG13-226ENST00000580238 LINC00116Q8NCU8 138 aa22.23■■□□□ 1.15
ATG13-226ENST00000580238 STK32BQ9NY57 414 aa22.23■■□□□ 1.15
ATG13-226ENST00000580238 TRIM35Q9UPQ4 493 aa22.23■■□□□ 1.15
ATG13-226ENST00000580238 APAF1O14727 1248 aa22.22■■□□□ 1.15
ATG13-226ENST00000580238 NEUROD2Q15784 382 aa22.22■■□□□ 1.15
ATG13-226ENST00000580238 QSER1Q2KHR3 1735 aa22.21■■□□□ 1.15
ATG13-226ENST00000580238 CASZ1Q86V15 1759 aa22.21■■□□□ 1.15
ATG13-226ENST00000580238 KCNQ3O43525 872 aa22.21■■□□□ 1.15
ATG13-226ENST00000580238 ZNF790Q6PG37 636 aa22.21■■□□□ 1.15
ATG13-226ENST00000580238 BTBD11A6QL63 1104 aa22.2■■□□□ 1.14
ATG13-226ENST00000580238 PDGFDQ9GZP0 370 aaPredicted RBP22.2■■□□□ 1.14
ATG13-226ENST00000580238 CCER2I3L3R5 266 aa22.19■■□□□ 1.14
ATG13-226ENST00000580238 TAF7Q15545 349 aaPredicted RBP22.19■■□□□ 1.14
ATG13-226ENST00000580238 KDM3BQ7LBC6 1761 aa22.19■■□□□ 1.14
ATG13-226ENST00000580238 LMOD3Q0VAK6 560 aa22.18■■□□□ 1.14
ATG13-226ENST00000580238 FAM9BQ8IZU0 186 aa22.18■■□□□ 1.14
ATG13-226ENST00000580238 ZNF496Q96IT1 587 aaPredicted RBP22.18■■□□□ 1.14
ATG13-226ENST00000580238 MYH14Q7Z406 1995 aaKnown RBP22.18■■□□□ 1.14
ATG13-226ENST00000580238 SRCAPQ6ZRS2 3230 aa22.18■■□□□ 1.14
ATG13-226ENST00000580238 UBR3Q6ZT12 1888 aa22.17■■□□□ 1.14
ATG13-226ENST00000580238 AMIGO3Q86WK7 504 aa22.17■■□□□ 1.14
ATG13-226ENST00000580238 TTC5Q8N0Z6 440 aa22.17■■□□□ 1.14
ATG13-226ENST00000580238 MIER1Q8N108 512 aa22.17■■□□□ 1.14
ATG13-226ENST00000580238 MIS18AQ9NYP9 233 aa22.17■■□□□ 1.14
ATG13-226ENST00000580238 PNPLA7Q6ZV29 1317 aa22.16■■□□□ 1.14
ATG13-226ENST00000580238 SENP3-EIF4A1A0A087X0R7 540 aa22.16■■□□□ 1.14
ATG13-226ENST00000580238 DNAJC10Q8IXB1 793 aa22.16■■□□□ 1.14
ATG13-226ENST00000580238 HEG1Q9ULI3 1381 aa22.14■■□□□ 1.14
ATG13-226ENST00000580238 VSIG10Q8N0Z9 540 aa22.14■■□□□ 1.13
ATG13-226ENST00000580238 TFCP2L1Q9NZI6 479 aa22.14■■□□□ 1.13
ATG13-226ENST00000580238 CNTNAP4Q9C0A0 1308 aa22.13■■□□□ 1.13
ATG13-226ENST00000580238 SMIM5Q71RC9 77 aa22.13■■□□□ 1.13
ATG13-226ENST00000580238 HMGB2P26583 209 aaKnown RBP22.12■■□□□ 1.13
ATG13-226ENST00000580238 AK7Q96M32 723 aa22.12■■□□□ 1.13
ATG13-226ENST00000580238 FMNL2Q96PY5 1086 aa22.12■■□□□ 1.13
ATG13-226ENST00000580238 CYP19A1P11511 503 aaPredicted RBP22.11■■□□□ 1.13
ATG13-226ENST00000580238 RC3H1Q5TC82 1133 aaKnown RBP22.11■■□□□ 1.13
ATG13-226ENST00000580238 CRKLP46109 303 aaKnown RBP22.1■■□□□ 1.13
ATG13-226ENST00000580238 INTS5Q6P9B9 1019 aaKnown RBP22.1■■□□□ 1.13
ATG13-226ENST00000580238 COL23A1Q86Y22 540 aaPredicted RBP22.1■■□□□ 1.13
ATG13-226ENST00000580238 PRAMEF22A3QJZ6 481 aa22.09■■□□□ 1.13
ATG13-226ENST00000580238 GNPATO15228 680 aa22.09■■□□□ 1.13
ATG13-226ENST00000580238 CHL1O00533 1208 aa22.08■■□□□ 1.13
ATG13-226ENST00000580238 EIF4A1P60842 406 aaKnown RBP22.08■■□□□ 1.13
ATG13-226ENST00000580238 CCDC27Q2M243 656 aa22.08■■□□□ 1.13
ATG13-226ENST00000580238 NCBP3Q53F19 620 aaKnown RBP22.08■■□□□ 1.13
ATG13-226ENST00000580238 BABAM1Q9NWV8 329 aa22.08■■□□□ 1.13
ATG13-226ENST00000580238 TSPYL4Q9UJ04 414 aa22.08■■□□□ 1.13
ATG13-226ENST00000580238 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.07■■□□□ 1.12
ATG13-226ENST00000580238 SSFA2P28290 1259 aa22.07■■□□□ 1.12
ATG13-226ENST00000580238 RPS6KA4O75676 772 aa22.06■■□□□ 1.12
ATG13-226ENST00000580238 PHF14O94880 888 aa22.06■■□□□ 1.12
ATG13-226ENST00000580238 ZBTB7AO95365 584 aa22.06■■□□□ 1.12
ATG13-226ENST00000580238 WWC1Q8IX03 1113 aa22.06■■□□□ 1.12
ATG13-226ENST00000580238 CCDC87Q9NVE4 849 aa22.06■■□□□ 1.12
ATG13-226ENST00000580238 USP16Q9Y5T5 823 aa22.06■■□□□ 1.12
ATG13-226ENST00000580238 LRP5O75197 1615 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms