RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 KDM3BQ7LBC6 1761 aa20.79■□□□□ 0.92
CSNK1D-212ENST00000580061 IL16Q14005 1332 aa20.78■□□□□ 0.92
CSNK1D-212ENST00000580061 TAF7Q15545 349 aaPredicted RBP20.78■□□□□ 0.92
CSNK1D-212ENST00000580061 BTAF1O14981 1849 aa20.78■□□□□ 0.92
CSNK1D-212ENST00000580061 PAPPAQ13219 1627 aa20.78■□□□□ 0.92
CSNK1D-212ENST00000580061 KCNQ2O43526 872 aa20.77■□□□□ 0.92
CSNK1D-212ENST00000580061 SYTL4Q96C24 671 aaPredicted RBP20.77■□□□□ 0.92
CSNK1D-212ENST00000580061 TMOD3Q9NYL9 352 aa20.77■□□□□ 0.92
CSNK1D-212ENST00000580061 GOLGA2Q08379 1002 aa20.76■□□□□ 0.91
CSNK1D-212ENST00000580061 IFT57Q9NWB7 429 aa20.76■□□□□ 0.91
CSNK1D-212ENST00000580061 ZNF853P0CG23 659 aa20.75■□□□□ 0.91
CSNK1D-212ENST00000580061 PIGBQ92521 554 aa20.75■□□□□ 0.91
CSNK1D-212ENST00000580061 CFAP44Q96MT7 982 aa20.75■□□□□ 0.91
CSNK1D-212ENST00000580061 BTBD11A6QL63 1104 aa20.74■□□□□ 0.91
CSNK1D-212ENST00000580061 GNAI1P63096 354 aa20.74■□□□□ 0.91
CSNK1D-212ENST00000580061 SPINK5Q9NQ38 1064 aaPredicted RBP20.74■□□□□ 0.91
CSNK1D-212ENST00000580061 BABAM1Q9NWV8 329 aa20.74■□□□□ 0.91
CSNK1D-212ENST00000580061 LAS1LQ9Y4W2 734 aaKnown RBP20.74■□□□□ 0.91
CSNK1D-212ENST00000580061 UBR2Q8IWV8 1755 aa20.74■□□□□ 0.91
CSNK1D-212ENST00000580061 CHL1O00533 1208 aa20.73■□□□□ 0.91
CSNK1D-212ENST00000580061 PTF1AQ7RTS3 328 aa20.73■□□□□ 0.91
CSNK1D-212ENST00000580061 MIS18AQ9NYP9 233 aa20.73■□□□□ 0.91
CSNK1D-212ENST00000580061 TNS1Q9HBL0 1735 aaKnown RBP20.73■□□□□ 0.91
CSNK1D-212ENST00000580061 CDCA7LQ96GN5 454 aa20.72■□□□□ 0.91
CSNK1D-212ENST00000580061 BCL11BQ9C0K0 894 aaPredicted RBP20.72■□□□□ 0.91
CSNK1D-212ENST00000580061 E9PSI1 815 aa20.71■□□□□ 0.91
CSNK1D-212ENST00000580061 TRIM37O94972 964 aa20.71■□□□□ 0.91
CSNK1D-212ENST00000580061 SLFN5Q08AF3 891 aa20.71■□□□□ 0.91
CSNK1D-212ENST00000580061 TSPYL4Q9UJ04 414 aa20.71■□□□□ 0.91
CSNK1D-212ENST00000580061 SLC39A6Q13433 755 aa20.7■□□□□ 0.9
CSNK1D-212ENST00000580061 MBIPQ9NS73 344 aa20.7■□□□□ 0.9
CSNK1D-212ENST00000580061 ATG3Q9NT62 314 aa20.7■□□□□ 0.9
CSNK1D-212ENST00000580061 ZNF790Q6PG37 636 aa20.69■□□□□ 0.9
CSNK1D-212ENST00000580061 TRMT2AQ8IZ69 625 aaKnown RBP20.69■□□□□ 0.9
CSNK1D-212ENST00000580061 MYH16Q9H6N6 1097 aa20.69■□□□□ 0.9
CSNK1D-212ENST00000580061 ASAP1Q9ULH1 1129 aa20.69■□□□□ 0.9
CSNK1D-212ENST00000580061 KCPQ6ZWJ8 1503 aa20.68■□□□□ 0.9
CSNK1D-212ENST00000580061 LY75O60449 1722 aa20.68■□□□□ 0.9
CSNK1D-212ENST00000580061 KCNQ3O43525 872 aa20.68■□□□□ 0.9
CSNK1D-212ENST00000580061 TSR2Q969E8 191 aaKnown RBP20.68■□□□□ 0.9
CSNK1D-212ENST00000580061 FANCIQ9NVI1 1328 aa20.68■□□□□ 0.9
CSNK1D-212ENST00000580061 TTC5Q8N0Z6 440 aa20.67■□□□□ 0.9
CSNK1D-212ENST00000580061 DUSP27Q5VZP5 1158 aa20.65■□□□□ 0.9
CSNK1D-212ENST00000580061 SMARCC1Q92922 1105 aaPredicted RBP20.65■□□□□ 0.9
CSNK1D-212ENST00000580061 PALLDQ8WX93 1383 aa20.64■□□□□ 0.89
CSNK1D-212ENST00000580061 EIF4A1P60842 406 aaKnown RBP20.64■□□□□ 0.89
CSNK1D-212ENST00000580061 RGPD3A6NKT7 1758 aaPredicted RBP20.64■□□□□ 0.89
CSNK1D-212ENST00000580061 RGPD4Q7Z3J3 1758 aa20.64■□□□□ 0.89
CSNK1D-212ENST00000580061 ZNF831Q5JPB2 1677 aa20.64■□□□□ 0.89
CSNK1D-212ENST00000580061 HEG1Q9ULI3 1381 aa20.63■□□□□ 0.89
CSNK1D-212ENST00000580061 ILDR2Q71H61 639 aa20.63■□□□□ 0.89
CSNK1D-212ENST00000580061 ZNF496Q96IT1 587 aaPredicted RBP20.63■□□□□ 0.89
CSNK1D-212ENST00000580061 C5P01031 1676 aa20.63■□□□□ 0.89
CSNK1D-212ENST00000580061 FMNL2Q96PY5 1086 aa20.62■□□□□ 0.89
CSNK1D-212ENST00000580061 CICQ96RK0 1608 aaPredicted RBP20.62■□□□□ 0.89
CSNK1D-212ENST00000580061 TJP1Q07157 1748 aa20.61■□□□□ 0.89
CSNK1D-212ENST00000580061 PTCD1O75127 700 aaKnown RBP20.61■□□□□ 0.89
CSNK1D-212ENST00000580061 APBA3O96018 575 aa20.61■□□□□ 0.89
CSNK1D-212ENST00000580061 LAMB4A4D0S4 1761 aa20.61■□□□□ 0.89
CSNK1D-212ENST00000580061 EXOSC9Q06265 439 aaKnown RBP20.6■□□□□ 0.89
CSNK1D-212ENST00000580061 KRT24Q2M2I5 525 aa20.6■□□□□ 0.89
CSNK1D-212ENST00000580061 RBM42Q9BTD8 480 aaKnown RBP20.6■□□□□ 0.89
CSNK1D-212ENST00000580061 PLSCR1O15162 318 aa20.59■□□□□ 0.89
CSNK1D-212ENST00000580061 C8orf58Q8NAV2 365 aa20.59■□□□□ 0.89
CSNK1D-212ENST00000580061 SLC4A9Q96Q91 983 aa20.59■□□□□ 0.89
CSNK1D-212ENST00000580061 TAF1LQ8IZX4 1826 aa20.59■□□□□ 0.89
CSNK1D-212ENST00000580061 LOC102724428A0A0B4J2F2 783 aa20.58■□□□□ 0.89
CSNK1D-212ENST00000580061 GIGYF1O75420 1035 aaPredicted RBP20.58■□□□□ 0.89
CSNK1D-212ENST00000580061 SIK1P57059 783 aa20.58■□□□□ 0.89
CSNK1D-212ENST00000580061 VSIG10Q8N0Z9 540 aa20.58■□□□□ 0.89
CSNK1D-212ENST00000580061 COL5A3P25940 1745 aaPredicted RBP20.58■□□□□ 0.88
CSNK1D-212ENST00000580061 CCDC125Q86Z20 511 aa20.57■□□□□ 0.88
CSNK1D-212ENST00000580061 TSPYL6Q8N831 410 aa20.57■□□□□ 0.88
CSNK1D-212ENST00000580061 ELL2O00472 640 aaPredicted RBP20.56■□□□□ 0.88
CSNK1D-212ENST00000580061 SNRPA1P09661 255 aaKnown RBP20.56■□□□□ 0.88
CSNK1D-212ENST00000580061 SF3B2Q13435 895 aaKnown RBP20.56■□□□□ 0.88
CSNK1D-212ENST00000580061 TWISTNBQ3B726 338 aaPredicted RBP20.56■□□□□ 0.88
CSNK1D-212ENST00000580061 SOS1Q07889 1333 aaPredicted RBP20.55■□□□□ 0.88
CSNK1D-212ENST00000580061 PRAMEF22A3QJZ6 481 aa20.55■□□□□ 0.88
CSNK1D-212ENST00000580061 HOXB7P09629 217 aa20.55■□□□□ 0.88
CSNK1D-212ENST00000580061 ATP6V1AP38606 617 aa20.55■□□□□ 0.88
CSNK1D-212ENST00000580061 UPF1Q92900 1129 aaKnown RBP eCLIP20.54■□□□□ 0.884e-6■□□□□ 10.4
CSNK1D-212ENST00000580061 CCNL1Q9UK58 526 aaPredicted RBP20.54■□□□□ 0.88
CSNK1D-212ENST00000580061 VAMP4O75379 141 aa20.53■□□□□ 0.88
CSNK1D-212ENST00000580061 ITPK1Q13572 414 aa20.53■□□□□ 0.88
CSNK1D-212ENST00000580061 TXNRD1Q16881 649 aa20.53■□□□□ 0.88
CSNK1D-212ENST00000580061 SLC27A3Q5K4L6 730 aa20.53■□□□□ 0.88
CSNK1D-212ENST00000580061 DNAJC10Q8IXB1 793 aa20.53■□□□□ 0.88
CSNK1D-212ENST00000580061 PROM2Q8N271 834 aa20.53■□□□□ 0.88
CSNK1D-212ENST00000580061 TEX13AQ9BXU3 409 aaPredicted RBP20.53■□□□□ 0.88
CSNK1D-212ENST00000580061 RREB1Q92766 1687 aa20.53■□□□□ 0.88
CSNK1D-212ENST00000580061 CT47B1P0C2W7 299 aaPredicted RBP20.52■□□□□ 0.88
CSNK1D-212ENST00000580061 BAG6P46379 1132 aa20.52■□□□□ 0.88
CSNK1D-212ENST00000580061 USP16Q9Y5T5 823 aa20.52■□□□□ 0.88
CSNK1D-212ENST00000580061 KCNQ4P56696 695 aa20.51■□□□□ 0.87
CSNK1D-212ENST00000580061 EN1Q05925 392 aaPredicted RBP20.51■□□□□ 0.87
CSNK1D-212ENST00000580061 CAMKK2Q96RR4 588 aa20.51■□□□□ 0.87
CSNK1D-212ENST00000580061 LRRC4BQ9NT99 713 aa20.51■□□□□ 0.87
CSNK1D-212ENST00000580061 CACNA1FO60840 1977 aa20.51■□□□□ 0.87
CSNK1D-212ENST00000580061 MYH14Q7Z406 1995 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms