RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 CLEC11AQ9Y240 323 aa3.54□□□□□ -1.84
SNORD53-201ENST00000579969 CASP8AP2Q9UKL3 1982 aa3.54□□□□□ -1.84
SNORD53-201ENST00000579969 SLIT3O75094 1523 aa3.54□□□□□ -1.84
SNORD53-201ENST00000579969 SBF1O95248 1867 aa3.54□□□□□ -1.84
SNORD53-201ENST00000579969 LY75O60449 1722 aa3.53□□□□□ -1.84
SNORD53-201ENST00000579969 PALLDQ8WX93 1383 aa3.53□□□□□ -1.84
SNORD53-201ENST00000579969 TNRC6CQ9HCJ0 1690 aaKnown RBP3.53□□□□□ -1.84
SNORD53-201ENST00000579969 LOC102724428A0A0B4J2F2 783 aa3.53□□□□□ -1.84
SNORD53-201ENST00000579969 DDNO94850 711 aaPredicted RBP3.53□□□□□ -1.84
SNORD53-201ENST00000579969 GYS1P13807 737 aa3.53□□□□□ -1.84
SNORD53-201ENST00000579969 PRKCSHP14314 528 aaPredicted RBP3.53□□□□□ -1.84
SNORD53-201ENST00000579969 RFC4P35249 363 aa3.53□□□□□ -1.84
SNORD53-201ENST00000579969 MAP2K2P36507 400 aa3.53□□□□□ -1.84
SNORD53-201ENST00000579969 ATP6V1AP38606 617 aa3.53□□□□□ -1.84
SNORD53-201ENST00000579969 ECE1P42892 770 aa3.53□□□□□ -1.84
SNORD53-201ENST00000579969 SIK1P57059 783 aa3.53□□□□□ -1.84
SNORD53-201ENST00000579969 GRM1Q13255 1194 aa3.53□□□□□ -1.84
SNORD53-201ENST00000579969 NBPF1Q3BBV0 1214 aa3.53□□□□□ -1.84
SNORD53-201ENST00000579969 ERFEQ4G0M1 354 aa3.53□□□□□ -1.84
SNORD53-201ENST00000579969 PAXIP1Q6ZW49 1069 aaPredicted RBP3.53□□□□□ -1.84
SNORD53-201ENST00000579969 CNTROBQ8N137 903 aa3.53□□□□□ -1.84
SNORD53-201ENST00000579969 NBPF15Q8N660 670 aa3.53□□□□□ -1.84
SNORD53-201ENST00000579969 SLC17A8Q8NDX2 589 aa3.53□□□□□ -1.84
SNORD53-201ENST00000579969 PIGBQ92521 554 aa3.53□□□□□ -1.84
SNORD53-201ENST00000579969 IP6K1Q92551 441 aa3.53□□□□□ -1.84
SNORD53-201ENST00000579969 CAPNS2Q96L46 248 aa3.53□□□□□ -1.84
SNORD53-201ENST00000579969 STAC3Q96MF2 364 aa3.53□□□□□ -1.84
SNORD53-201ENST00000579969 RTCBQ9Y3I0 505 aaKnown RBP3.53□□□□□ -1.84
SNORD53-201ENST00000579969 WNK3Q9BYP7 1800 aa3.53□□□□□ -1.84
SNORD53-201ENST00000579969 ITSN1Q15811 1721 aa3.53□□□□□ -1.85
SNORD53-201ENST00000579969 NSD3Q9BZ95 1437 aa3.53□□□□□ -1.85
SNORD53-201ENST00000579969 TTC21AQ8NDW8 1320 aa3.52□□□□□ -1.85
SNORD53-201ENST00000579969 ADGRB1O14514 1584 aa3.52□□□□□ -1.85
SNORD53-201ENST00000579969 IQCA1LA6NCM1 817 aa3.52□□□□□ -1.85
SNORD53-201ENST00000579969 CA12O43570 354 aa3.52□□□□□ -1.85
SNORD53-201ENST00000579969 AOC2O75106 756 aa3.52□□□□□ -1.85
SNORD53-201ENST00000579969 ITPK1Q13572 414 aa3.52□□□□□ -1.85
SNORD53-201ENST00000579969 EAPPQ56P03 285 aaPredicted RBP3.52□□□□□ -1.85
SNORD53-201ENST00000579969 CYP4F22Q6NT55 531 aa3.52□□□□□ -1.85
SNORD53-201ENST00000579969 PPARGC1BQ86YN6 1023 aaKnown RBP3.52□□□□□ -1.85
SNORD53-201ENST00000579969 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.52□□□□□ -1.85
SNORD53-201ENST00000579969 TTLL6Q8N841 843 aa3.52□□□□□ -1.85
SNORD53-201ENST00000579969 TAF1DQ9H5J8 278 aaPredicted RBP3.52□□□□□ -1.85
SNORD53-201ENST00000579969 KDM6AO15550 1401 aaPredicted RBP3.52□□□□□ -1.85
SNORD53-201ENST00000579969 A0A0C4DFX4 3053 aa3.52□□□□□ -1.85
SNORD53-201ENST00000579969 VIRMAQ69YN4 1812 aaKnown RBP3.51□□□□□ -1.85
SNORD53-201ENST00000579969 PKD1L3Q7Z443 1732 aa3.51□□□□□ -1.85
SNORD53-201ENST00000579969 NFKBIEO00221 500 aa3.51□□□□□ -1.85
SNORD53-201ENST00000579969 RPS6KA4O75676 772 aa3.51□□□□□ -1.85
SNORD53-201ENST00000579969 ADRA2BP18089 450 aa3.51□□□□□ -1.85
SNORD53-201ENST00000579969 FXR1P51114 621 aaKnown RBP eCLIP3.51□□□□□ -1.85
SNORD53-201ENST00000579969 FKBP8Q14318 412 aa3.51□□□□□ -1.85
SNORD53-201ENST00000579969 RC3H1Q5TC82 1133 aaKnown RBP3.51□□□□□ -1.85
SNORD53-201ENST00000579969 MAP1SQ66K74 1059 aaPredicted RBP3.51□□□□□ -1.85
SNORD53-201ENST00000579969 RAPGEF4Q8WZA2 1011 aa3.51□□□□□ -1.85
SNORD53-201ENST00000579969 ASAP1Q9ULH1 1129 aa3.51□□□□□ -1.85
SNORD53-201ENST00000579969 CUL9Q8IWT3 2517 aa3.51□□□□□ -1.85
SNORD53-201ENST00000579969 PIK3C2AO00443 1686 aa3.51□□□□□ -1.85
SNORD53-201ENST00000579969 ARFGEF1Q9Y6D6 1849 aa3.51□□□□□ -1.85
SNORD53-201ENST00000579969 KIAA1551Q9HCM1 1747 aa3.5□□□□□ -1.85
SNORD53-201ENST00000579969 CGNL1Q0VF96 1302 aa3.5□□□□□ -1.85
SNORD53-201ENST00000579969 USP54Q70EL1 1684 aa3.5□□□□□ -1.85
SNORD53-201ENST00000579969 KIF13BQ9NQT8 1826 aa3.5□□□□□ -1.85
SNORD53-201ENST00000579969 CYP27B1O15528 508 aa3.5□□□□□ -1.85
SNORD53-201ENST00000579969 TATP17735 454 aaPredicted RBP3.5□□□□□ -1.85
SNORD53-201ENST00000579969 TM4SF1P30408 202 aa3.5□□□□□ -1.85
SNORD53-201ENST00000579969 AMPHP49418 695 aa3.5□□□□□ -1.85
SNORD53-201ENST00000579969 FMR1Q06787 632 aaKnown RBP eCLIP3.5□□□□□ -1.85
SNORD53-201ENST00000579969 DDR1Q08345 913 aa3.5□□□□□ -1.85
SNORD53-201ENST00000579969 NBPF6Q5VWK0 638 aa3.5□□□□□ -1.85
SNORD53-201ENST00000579969 PNMA8AQ86V59 439 aaPredicted RBP3.5□□□□□ -1.85
SNORD53-201ENST00000579969 NME9Q86XW9 330 aa3.5□□□□□ -1.85
SNORD53-201ENST00000579969 NBPF4Q96M43 638 aa3.5□□□□□ -1.85
SNORD53-201ENST00000579969 DDX21Q9NR30 783 aaKnown RBP eCLIP3.5□□□□□ -1.85
SNORD53-201ENST00000579969 SRP68Q9UHB9 627 aaKnown RBP3.5□□□□□ -1.85
SNORD53-201ENST00000579969 HACL1Q9UJ83 578 aa3.5□□□□□ -1.85
SNORD53-201ENST00000579969 C4BP0C0L5 1744 aa3.5□□□□□ -1.85
SNORD53-201ENST00000579969 CCDC88AQ3V6T2 1871 aa3.5□□□□□ -1.85
SNORD53-201ENST00000579969 UBR3Q6ZT12 1888 aa3.5□□□□□ -1.85
SNORD53-201ENST00000579969 C5P01031 1676 aa3.49□□□□□ -1.85
SNORD53-201ENST00000579969 TAF1LQ8IZX4 1826 aa3.49□□□□□ -1.85
SNORD53-201ENST00000579969 CENPJQ9HC77 1338 aaPredicted RBP3.49□□□□□ -1.85
SNORD53-201ENST00000579969 H0YIN7 160 aa3.49□□□□□ -1.85
SNORD53-201ENST00000579969 POLRMTO00411 1230 aaKnown RBP3.49□□□□□ -1.85
SNORD53-201ENST00000579969 C21orf2O43822 256 aa3.49□□□□□ -1.85
SNORD53-201ENST00000579969 FBLN1P23142 703 aa3.49□□□□□ -1.85
SNORD53-201ENST00000579969 EPHX2P34913 555 aa3.49□□□□□ -1.85
SNORD53-201ENST00000579969 BRPF1P55201 1214 aaPredicted RBP3.49□□□□□ -1.85
SNORD53-201ENST00000579969 NKX1-1Q15270 411 aaPredicted RBP3.49□□□□□ -1.85
SNORD53-201ENST00000579969 CST9Q5W186 159 aa3.49□□□□□ -1.85
SNORD53-201ENST00000579969 CIAPIN1Q6FI81 312 aa3.49□□□□□ -1.85
SNORD53-201ENST00000579969 C2CD5Q86YS7 1000 aa3.49□□□□□ -1.85
SNORD53-201ENST00000579969 USHBP1Q8N6Y0 703 aa3.49□□□□□ -1.85
SNORD53-201ENST00000579969 ZNF622Q969S3 477 aaKnown RBP eCLIP3.49□□□□□ -1.85
SNORD53-201ENST00000579969 L3MBTL3Q96JM7 780 aaPredicted RBP3.49□□□□□ -1.85
SNORD53-201ENST00000579969 RBM42Q9BTD8 480 aaKnown RBP3.49□□□□□ -1.85
SNORD53-201ENST00000579969 ATG3Q9NT62 314 aa3.49□□□□□ -1.85
SNORD53-201ENST00000579969 TMOD3Q9NYL9 352 aa3.49□□□□□ -1.85
SNORD53-201ENST00000579969 BRCA1P38398 1863 aaKnown RBP3.49□□□□□ -1.85
SNORD53-201ENST00000579969 USP31Q70CQ4 1352 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms