RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 GAS2L2Q8NHY3 880 aa21.77■■□□□ 1.08
RARA-209ENST00000579727 TUBGCP6Q96RT7 1819 aa21.77■■□□□ 1.08
RARA-209ENST00000579727 RNMTO43148 476 aaKnown RBP21.76■■□□□ 1.07
RARA-209ENST00000579727 SLC27A3Q5K4L6 730 aa21.76■■□□□ 1.07
RARA-209ENST00000579727 STK32BQ9NY57 414 aa21.76■■□□□ 1.07
RARA-209ENST00000579727 DLG5Q8TDM6 1919 aa21.75■■□□□ 1.07
RARA-209ENST00000579727 ZNF827Q17R98 1081 aa21.75■■□□□ 1.07
RARA-209ENST00000579727 NFATC2IPQ8NCF5 419 aa21.75■■□□□ 1.07
RARA-209ENST00000579727 ATG3Q9NT62 314 aa21.75■■□□□ 1.07
RARA-209ENST00000579727 MRC1P22897 1456 aa21.75■■□□□ 1.07
RARA-209ENST00000579727 SMARCC1Q92922 1105 aaPredicted RBP21.74■■□□□ 1.07
RARA-209ENST00000579727 GNAT3A8MTJ3 354 aa21.73■■□□□ 1.07
RARA-209ENST00000579727 PTGER2P43116 358 aa21.73■■□□□ 1.07
RARA-209ENST00000579727 SLC15A2Q16348 729 aa21.73■■□□□ 1.07
RARA-209ENST00000579727 ZBTB7AO95365 584 aa21.72■■□□□ 1.07
RARA-209ENST00000579727 SLC52A2Q9HAB3 445 aa21.72■■□□□ 1.07
RARA-209ENST00000579727 SIPA1L3O60292 1781 aaPredicted RBP21.71■■□□□ 1.07
RARA-209ENST00000579727 ANP32CO43423 234 aa21.71■■□□□ 1.07
RARA-209ENST00000579727 PLEKHF1Q96S99 279 aa21.71■■□□□ 1.07
RARA-209ENST00000579727 RBM42Q9BTD8 480 aaKnown RBP21.71■■□□□ 1.07
RARA-209ENST00000579727 C4BP0C0L5 1744 aa21.7■■□□□ 1.06
RARA-209ENST00000579727 LOC102724428A0A0B4J2F2 783 aa21.7■■□□□ 1.06
RARA-209ENST00000579727 SIK1P57059 783 aa21.7■■□□□ 1.06
RARA-209ENST00000579727 C1QTNF8P60827 252 aa21.7■■□□□ 1.06
RARA-209ENST00000579727 WDR43Q15061 677 aaKnown RBP eCLIP21.7■■□□□ 1.06
RARA-209ENST00000579727 CCDC184Q52MB2 194 aa21.7■■□□□ 1.06
RARA-209ENST00000579727 IL17REQ8NFR9 667 aa21.7■■□□□ 1.06
RARA-209ENST00000579727 NEFMP07197 916 aa21.69■■□□□ 1.06
RARA-209ENST00000579727 IFFO2Q5TF58 517 aa21.69■■□□□ 1.06
RARA-209ENST00000579727 CCDC146Q8IYE0 955 aa21.69■■□□□ 1.06
RARA-209ENST00000579727 AKT1S1Q96B36 256 aa21.69■■□□□ 1.06
RARA-209ENST00000579727 MAPK8IP3Q9UPT6 1336 aa21.69■■□□□ 1.06
RARA-209ENST00000579727 QSER1Q2KHR3 1735 aa21.69■■□□□ 1.06
RARA-209ENST00000579727 SLC39A6Q13433 755 aa21.68■■□□□ 1.06
RARA-209ENST00000579727 DCTN1Q14203 1278 aa21.68■■□□□ 1.06
RARA-209ENST00000579727 MCM10Q7L590 875 aa21.68■■□□□ 1.06
RARA-209ENST00000579727 ATF5Q9Y2D1 282 aaPredicted RBP21.68■■□□□ 1.06
RARA-209ENST00000579727 TJP1Q07157 1748 aa21.67■■□□□ 1.06
RARA-209ENST00000579727 PTCD1O75127 700 aaKnown RBP21.67■■□□□ 1.06
RARA-209ENST00000579727 ATP6V1AP38606 617 aa21.67■■□□□ 1.06
RARA-209ENST00000579727 ITPK1Q13572 414 aa21.67■■□□□ 1.06
RARA-209ENST00000579727 COL5A3P25940 1745 aaPredicted RBP21.66■■□□□ 1.06
RARA-209ENST00000579727 TEFQ10587 303 aa21.66■■□□□ 1.06
RARA-209ENST00000579727 LINC00116Q8NCU8 138 aa21.66■■□□□ 1.06
RARA-209ENST00000579727 SLC4A9Q96Q91 983 aa21.66■■□□□ 1.06
RARA-209ENST00000579727 RTF1Q92541 710 aaKnown RBP21.65■■□□□ 1.06
RARA-209ENST00000579727 SYT17Q9BSW7 474 aa21.65■■□□□ 1.06
RARA-209ENST00000579727 FHDC1Q9C0D6 1143 aaPredicted RBP21.65■■□□□ 1.06
RARA-209ENST00000579727 TFCP2L1Q9NZI6 479 aa21.65■■□□□ 1.06
RARA-209ENST00000579727 ADAMTS8Q9UP79 889 aa21.65■■□□□ 1.06
RARA-209ENST00000579727 UBR2Q8IWV8 1755 aa21.65■■□□□ 1.06
RARA-209ENST00000579727 ZNF831Q5JPB2 1677 aa21.65■■□□□ 1.06
RARA-209ENST00000579727 CEMIPQ8WUJ3 1361 aa21.64■■□□□ 1.06
RARA-209ENST00000579727 PNNQ9H307 717 aaKnown RBP21.64■■□□□ 1.05
RARA-209ENST00000579727 KCPQ6ZWJ8 1503 aa21.64■■□□□ 1.05
RARA-209ENST00000579727 PNPLA7Q6ZV29 1317 aa21.63■■□□□ 1.05
RARA-209ENST00000579727 UBR3Q6ZT12 1888 aa21.63■■□□□ 1.05
RARA-209ENST00000579727 NFE2L2Q16236 605 aa21.63■■□□□ 1.05
RARA-209ENST00000579727 SMIM5Q71RC9 77 aa21.62■■□□□ 1.05
RARA-209ENST00000579727 AK7Q96M32 723 aa21.62■■□□□ 1.05
RARA-209ENST00000579727 RRP7AQ9Y3A4 280 aaKnown RBP21.61■■□□□ 1.05
RARA-209ENST00000579727 CICQ96RK0 1608 aaPredicted RBP21.6■■□□□ 1.05
RARA-209ENST00000579727 AMIGO3Q86WK7 504 aa21.6■■□□□ 1.05
RARA-209ENST00000579727 SGIP1Q9BQI5 828 aa21.6■■□□□ 1.05
RARA-209ENST00000579727 THUMPD2Q9BTF0 503 aaKnown RBP21.6■■□□□ 1.05
RARA-209ENST00000579727 MSH5O43196 834 aa21.59■■□□□ 1.05
RARA-209ENST00000579727 PHF14O94880 888 aa21.59■■□□□ 1.05
RARA-209ENST00000579727 MRS2Q9HD23 443 aa21.59■■□□□ 1.05
RARA-209ENST00000579727 NEUROD2Q15784 382 aa21.58■■□□□ 1.05
RARA-209ENST00000579727 TTC5Q8N0Z6 440 aa21.58■■□□□ 1.05
RARA-209ENST00000579727 RUNDC1Q96C34 613 aa21.58■■□□□ 1.05
RARA-209ENST00000579727 BTBD11A6QL63 1104 aa21.57■■□□□ 1.04
RARA-209ENST00000579727 KCNQ3O43525 872 aa21.57■■□□□ 1.04
RARA-209ENST00000579727 HTATSF1O43719 755 aaKnown RBP21.57■■□□□ 1.04
RARA-209ENST00000579727 RIPK4P57078 832 aa21.57■■□□□ 1.04
RARA-209ENST00000579727 MYH14Q7Z406 1995 aaKnown RBP21.57■■□□□ 1.04
RARA-209ENST00000579727 GNPATO15228 680 aa21.56■■□□□ 1.04
RARA-209ENST00000579727 TMPOP42166 694 aaKnown RBP21.56■■□□□ 1.04
RARA-209ENST00000579727 ZNF790Q6PG37 636 aa21.56■■□□□ 1.04
RARA-209ENST00000579727 COL23A1Q86Y22 540 aaPredicted RBP21.56■■□□□ 1.04
RARA-209ENST00000579727 DNAJC10Q8IXB1 793 aa21.56■■□□□ 1.04
RARA-209ENST00000579727 KDM3BQ7LBC6 1761 aa21.55■■□□□ 1.04
RARA-209ENST00000579727 ZNF496Q96IT1 587 aaPredicted RBP21.54■■□□□ 1.04
RARA-209ENST00000579727 MTFR1LQ9H019 292 aa21.54■■□□□ 1.04
RARA-209ENST00000579727 MIS18AQ9NYP9 233 aa21.54■■□□□ 1.04
RARA-209ENST00000579727 CEP350Q5VT06 3117 aa21.54■■□□□ 1.04
RARA-209ENST00000579727 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.53■■□□□ 1.04
RARA-209ENST00000579727 CNTNAP4Q9C0A0 1308 aa21.53■■□□□ 1.04
RARA-209ENST00000579727 CRKLP46109 303 aaKnown RBP21.52■■□□□ 1.04
RARA-209ENST00000579727 C4AP0C0L4 1744 aa21.52■■□□□ 1.03
RARA-209ENST00000579727 MSL1Q68DK7 614 aa21.51■■□□□ 1.03
RARA-209ENST00000579727 PNISRQ8TF01 805 aaKnown RBP21.51■■□□□ 1.03
RARA-209ENST00000579727 COL24A1Q17RW2 1714 aa21.51■■□□□ 1.03
RARA-209ENST00000579727 HEG1Q9ULI3 1381 aa21.5■■□□□ 1.03
RARA-209ENST00000579727 HMGB2P26583 209 aaKnown RBP21.5■■□□□ 1.03
RARA-209ENST00000579727 TAF7Q15545 349 aaPredicted RBP21.5■■□□□ 1.03
RARA-209ENST00000579727 APAF1O14727 1248 aa21.49■■□□□ 1.03
RARA-209ENST00000579727 SSFA2P28290 1259 aa21.49■■□□□ 1.03
RARA-209ENST00000579727 FMNL2Q96PY5 1086 aa21.49■■□□□ 1.03
RARA-209ENST00000579727 ARXQ96QS3 562 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms