RNA–Protein interactions for RNA: ENST00000579632.5

CDK5RAP3-214, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-214ENST00000579632 TMOD3Q9NYL9 352 aa13.65□□□□□ -0.22
CDK5RAP3-214ENST00000579632 KRT27Q7Z3Y8 459 aa13.64□□□□□ -0.23
CDK5RAP3-214ENST00000579632 MIS18AQ9NYP9 233 aa13.64□□□□□ -0.23
CDK5RAP3-214ENST00000579632 THSD7AQ9UPZ6 1657 aa13.63□□□□□ -0.23
CDK5RAP3-214ENST00000579632 PRIM1P49642 420 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-214ENST00000579632 ZNF790Q6PG37 636 aa13.63□□□□□ -0.23
CDK5RAP3-214ENST00000579632 SOS1Q07889 1333 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-214ENST00000579632 MRC1P22897 1456 aa13.62□□□□□ -0.23
CDK5RAP3-214ENST00000579632 FAM196AQ6ZSG2 479 aa13.62□□□□□ -0.23
CDK5RAP3-214ENST00000579632 TTC5Q8N0Z6 440 aa13.62□□□□□ -0.23
CDK5RAP3-214ENST00000579632 PIGBQ92521 554 aa13.62□□□□□ -0.23
CDK5RAP3-214ENST00000579632 ZNF428Q96B54 188 aa13.62□□□□□ -0.23
CDK5RAP3-214ENST00000579632 CHMP4AQ9BY43 222 aa13.62□□□□□ -0.23
CDK5RAP3-214ENST00000579632 LRRC37A3O60309 1634 aa13.61□□□□□ -0.23
CDK5RAP3-214ENST00000579632 EIF4A1P60842 406 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-214ENST00000579632 EXOSC9Q06265 439 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-214ENST00000579632 SYTL4Q96C24 671 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-214ENST00000579632 ADAMTS7Q9UKP4 1686 aa13.6□□□□□ -0.23
CDK5RAP3-214ENST00000579632 HOXB7P09629 217 aa13.59□□□□□ -0.23
CDK5RAP3-214ENST00000579632 TWISTNBQ3B726 338 aaPredicted RBP13.59□□□□□ -0.23
CDK5RAP3-214ENST00000579632 ACSBG1Q96GR2 724 aa13.59□□□□□ -0.23
CDK5RAP3-214ENST00000579632 FMNL2Q96PY5 1086 aa13.59□□□□□ -0.23
CDK5RAP3-214ENST00000579632 RCAN3Q9UKA8 241 aa13.59□□□□□ -0.23
CDK5RAP3-214ENST00000579632 KCNQ3O43525 872 aa13.58□□□□□ -0.24
CDK5RAP3-214ENST00000579632 VAMP4O75379 141 aa13.58□□□□□ -0.24
CDK5RAP3-214ENST00000579632 SLC39A6Q13433 755 aa13.58□□□□□ -0.24
CDK5RAP3-214ENST00000579632 C8orf58Q8NAV2 365 aa13.58□□□□□ -0.24
CDK5RAP3-214ENST00000579632 SMARCC1Q92922 1105 aaPredicted RBP13.58□□□□□ -0.24
CDK5RAP3-214ENST00000579632 RGS12O14924 1447 aa13.57□□□□□ -0.24
CDK5RAP3-214ENST00000579632 KCNQ2O43526 872 aa13.57□□□□□ -0.24
CDK5RAP3-214ENST00000579632 TSPYL6Q8N831 410 aa13.57□□□□□ -0.24
CDK5RAP3-214ENST00000579632 BCL11BQ9C0K0 894 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-214ENST00000579632 ATG3Q9NT62 314 aa13.57□□□□□ -0.24
CDK5RAP3-214ENST00000579632 ASAP1Q9ULH1 1129 aa13.57□□□□□ -0.24
CDK5RAP3-214ENST00000579632 WNK3Q9BYP7 1800 aa13.57□□□□□ -0.24
CDK5RAP3-214ENST00000579632 HEG1Q9ULI3 1381 aa13.57□□□□□ -0.24
CDK5RAP3-214ENST00000579632 ELL2O00472 640 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP3-214ENST00000579632 GIGYF1O75420 1035 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP3-214ENST00000579632 SNRPA1P09661 255 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-214ENST00000579632 FAM182BQ5T319 152 aa13.56□□□□□ -0.24
CDK5RAP3-214ENST00000579632 VSIG10Q8N0Z9 540 aa13.56□□□□□ -0.24
CDK5RAP3-214ENST00000579632 ZNF496Q96IT1 587 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP3-214ENST00000579632 SHANK3Q9BYB0 1731 aa13.56□□□□□ -0.24
CDK5RAP3-214ENST00000579632 RARSP54136 660 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-214ENST00000579632 KRT24Q2M2I5 525 aa13.55□□□□□ -0.24
CDK5RAP3-214ENST00000579632 ALDH1L2Q3SY69 923 aa13.55□□□□□ -0.24
CDK5RAP3-214ENST00000579632 PTCD1O75127 700 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP3-214ENST00000579632 CCDC30Q5VVM6 783 aa13.54□□□□□ -0.24
CDK5RAP3-214ENST00000579632 PELP1Q8IZL8 1130 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP3-214ENST00000579632 TEX13AQ9BXU3 409 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-214ENST00000579632 DLG5Q8TDM6 1919 aa13.54□□□□□ -0.24
CDK5RAP3-214ENST00000579632 BRPF1P55201 1214 aaPredicted RBP13.53□□□□□ -0.24
CDK5RAP3-214ENST00000579632 HDGFL1Q5TGJ6 251 aa13.52□□□□□ -0.25
CDK5RAP3-214ENST00000579632 RBM42Q9BTD8 480 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-214ENST00000579632 STK31Q9BXU1 1019 aa13.52□□□□□ -0.25
CDK5RAP3-214ENST00000579632 SMC4Q9NTJ3 1288 aa13.52□□□□□ -0.25
CDK5RAP3-214ENST00000579632 SCN11AQ9UI33 1791 aa13.52□□□□□ -0.25
CDK5RAP3-214ENST00000579632 PALLDQ8WX93 1383 aa13.51□□□□□ -0.25
CDK5RAP3-214ENST00000579632 LOC102724428A0A0B4J2F2 783 aa13.51□□□□□ -0.25
CDK5RAP3-214ENST00000579632 TRIM37O94972 964 aa13.51□□□□□ -0.25
CDK5RAP3-214ENST00000579632 STARD3NLO95772 234 aa13.51□□□□□ -0.25
CDK5RAP3-214ENST00000579632 HMGB2P26583 209 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP3-214ENST00000579632 SIK1P57059 783 aa13.51□□□□□ -0.25
CDK5RAP3-214ENST00000579632 SSH1Q8WYL5 1049 aa13.51□□□□□ -0.25
CDK5RAP3-214ENST00000579632 EIF2S2P20042 333 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-214ENST00000579632 PTF1AQ7RTS3 328 aa13.5□□□□□ -0.25
CDK5RAP3-214ENST00000579632 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP3-214ENST00000579632 DBF4Q9UBU7 674 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP3-214ENST00000579632 SUPT16HQ9Y5B9 1047 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-214ENST00000579632 ERBB4Q15303 1308 aa13.49□□□□□ -0.25
CDK5RAP3-214ENST00000579632 RNF123Q5XPI4 1314 aa13.49□□□□□ -0.25
CDK5RAP3-214ENST00000579632 KIF16BQ96L93 1317 aa13.49□□□□□ -0.25
CDK5RAP3-214ENST00000579632 IPO8O15397 1037 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP3-214ENST00000579632 BCAR3O75815 825 aa13.49□□□□□ -0.25
CDK5RAP3-214ENST00000579632 USP16Q9Y5T5 823 aa13.49□□□□□ -0.25
CDK5RAP3-214ENST00000579632 KCPQ6ZWJ8 1503 aa13.49□□□□□ -0.25
CDK5RAP3-214ENST00000579632 TOGARAM1Q9Y4F4 1720 aa13.48□□□□□ -0.25
CDK5RAP3-214ENST00000579632 PRAMEF22A3QJZ6 481 aa13.48□□□□□ -0.25
CDK5RAP3-214ENST00000579632 SLC4A2P04920 1241 aa13.48□□□□□ -0.25
CDK5RAP3-214ENST00000579632 ATP6V1AP38606 617 aa13.48□□□□□ -0.25
CDK5RAP3-214ENST00000579632 MRPL50Q8N5N7 158 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-214ENST00000579632 BCL2L13Q9BXK5 485 aa13.48□□□□□ -0.25
CDK5RAP3-214ENST00000579632 PLSCR1O15162 318 aa13.47□□□□□ -0.25
CDK5RAP3-214ENST00000579632 ARHGAP45Q92619 1136 aa13.47□□□□□ -0.25
CDK5RAP3-214ENST00000579632 NECTIN2Q92692 538 aa13.47□□□□□ -0.25
CDK5RAP3-214ENST00000579632 SLC4A9Q96Q91 983 aa13.47□□□□□ -0.25
CDK5RAP3-214ENST00000579632 DDX21Q9NR30 783 aaKnown RBP eCLIP13.47□□□□□ -0.25
CDK5RAP3-214ENST00000579632 HYPKQ9NX55 129 aa13.47□□□□□ -0.25
CDK5RAP3-214ENST00000579632 SIPA1L3O60292 1781 aaPredicted RBP13.46□□□□□ -0.25
CDK5RAP3-214ENST00000579632 CYP19A1P11511 503 aaPredicted RBP13.46□□□□□ -0.25
CDK5RAP3-214ENST00000579632 RRP1P56182 461 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP3-214ENST00000579632 SLC27A3Q5K4L6 730 aa13.46□□□□□ -0.25
CDK5RAP3-214ENST00000579632 DNAJC10Q8IXB1 793 aa13.46□□□□□ -0.25
CDK5RAP3-214ENST00000579632 CHPF2Q9P2E5 772 aa13.46□□□□□ -0.25
CDK5RAP3-214ENST00000579632 KDM3BQ7LBC6 1761 aa13.45□□□□□ -0.26
CDK5RAP3-214ENST00000579632 PTPRCP08575 1304 aa13.45□□□□□ -0.26
CDK5RAP3-214ENST00000579632 DOT1LQ8TEK3 1739 aa13.45□□□□□ -0.26
CDK5RAP3-214ENST00000579632 TCERG1O14776 1098 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP3-214ENST00000579632 APBA3O96018 575 aa13.45□□□□□ -0.26
CDK5RAP3-214ENST00000579632 MS4A1P11836 297 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms