RNA–Protein interactions for RNA: ENST00000579565.5

MSL1-206, Transcript of male specific lethal 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-206ENST00000579565 FAM9BQ8IZU0 186 aa23.48■■□□□ 1.35
MSL1-206ENST00000579565 RRP7AQ9Y3A4 280 aaKnown RBP23.48■■□□□ 1.35
MSL1-206ENST00000579565 DLG5Q8TDM6 1919 aa23.47■■□□□ 1.35
MSL1-206ENST00000579565 NUP188Q5SRE5 1749 aa23.47■■□□□ 1.35
MSL1-206ENST00000579565 CCER2I3L3R5 266 aa23.47■■□□□ 1.35
MSL1-206ENST00000579565 TMPOP42166 694 aaKnown RBP23.47■■□□□ 1.35
MSL1-206ENST00000579565 RIPK4P57078 832 aa23.47■■□□□ 1.35
MSL1-206ENST00000579565 NEUROD2Q15784 382 aa23.47■■□□□ 1.35
MSL1-206ENST00000579565 ASAP1Q9ULH1 1129 aa23.47■■□□□ 1.35
MSL1-206ENST00000579565 CEMIPQ8WUJ3 1361 aa23.46■■□□□ 1.35
MSL1-206ENST00000579565 LMOD3Q0VAK6 560 aa23.46■■□□□ 1.35
MSL1-206ENST00000579565 DCTN1Q14203 1278 aa23.46■■□□□ 1.35
MSL1-206ENST00000579565 LY75O60449 1722 aa23.46■■□□□ 1.35
MSL1-206ENST00000579565 MIER1Q8N108 512 aa23.45■■□□□ 1.34
MSL1-206ENST00000579565 ATG3Q9NT62 314 aa23.45■■□□□ 1.34
MSL1-206ENST00000579565 CCNL1Q9UK58 526 aaPredicted RBP23.45■■□□□ 1.34
MSL1-206ENST00000579565 SLC27A3Q5K4L6 730 aa23.44■■□□□ 1.34
MSL1-206ENST00000579565 APAF1O14727 1248 aa23.43■■□□□ 1.34
MSL1-206ENST00000579565 PROM2Q8N271 834 aa23.43■■□□□ 1.34
MSL1-206ENST00000579565 NBPF14Q5TI25 921 aa23.42■■□□□ 1.34
MSL1-206ENST00000579565 RBM42Q9BTD8 480 aaKnown RBP23.42■■□□□ 1.34
MSL1-206ENST00000579565 PAPPAQ13219 1627 aa23.41■■□□□ 1.34
MSL1-206ENST00000579565 SIPA1L3O60292 1781 aaPredicted RBP23.41■■□□□ 1.34
MSL1-206ENST00000579565 KCNQ4P56696 695 aa23.41■■□□□ 1.34
MSL1-206ENST00000579565 TTC5Q8N0Z6 440 aa23.41■■□□□ 1.34
MSL1-206ENST00000579565 THUMPD2Q9BTF0 503 aaKnown RBP23.41■■□□□ 1.34
MSL1-206ENST00000579565 LOC102724428A0A0B4J2F2 783 aa23.4■■□□□ 1.34
MSL1-206ENST00000579565 SIK1P57059 783 aa23.4■■□□□ 1.34
MSL1-206ENST00000579565 SLC39A6Q13433 755 aa23.4■■□□□ 1.34
MSL1-206ENST00000579565 LRRC4BQ9NT99 713 aa23.4■■□□□ 1.34
MSL1-206ENST00000579565 BTBD11A6QL63 1104 aa23.39■■□□□ 1.33
MSL1-206ENST00000579565 PTCD1O75127 700 aaKnown RBP23.39■■□□□ 1.33
MSL1-206ENST00000579565 ATP6V1AP38606 617 aa23.37■■□□□ 1.33
MSL1-206ENST00000579565 STK32BQ9NY57 414 aa23.37■■□□□ 1.33
MSL1-206ENST00000579565 SENP3-EIF4A1A0A087X0R7 540 aa23.36■■□□□ 1.33
MSL1-206ENST00000579565 C5P01031 1676 aa23.36■■□□□ 1.33
MSL1-206ENST00000579565 HMGB2P26583 209 aaKnown RBP23.35■■□□□ 1.33
MSL1-206ENST00000579565 TAF7Q15545 349 aaPredicted RBP23.35■■□□□ 1.33
MSL1-206ENST00000579565 ANO8Q9HCE9 1232 aaPredicted RBP23.35■■□□□ 1.33
MSL1-206ENST00000579565 TRIM35Q9UPQ4 493 aa23.35■■□□□ 1.33
MSL1-206ENST00000579565 ZNF790Q6PG37 636 aa23.34■■□□□ 1.33
MSL1-206ENST00000579565 KCPQ6ZWJ8 1503 aa23.34■■□□□ 1.33
MSL1-206ENST00000579565 PSDA5PKW4 1024 aaPredicted RBP23.33■■□□□ 1.32
MSL1-206ENST00000579565 R3HDM1Q15032 1099 aaKnown RBP23.33■■□□□ 1.32
MSL1-206ENST00000579565 UBR2Q8IWV8 1755 aa23.32■■□□□ 1.32
MSL1-206ENST00000579565 ITPK1Q13572 414 aa23.32■■□□□ 1.32
MSL1-206ENST00000579565 MIS18AQ9NYP9 233 aa23.32■■□□□ 1.32
MSL1-206ENST00000579565 ZNF831Q5JPB2 1677 aa23.31■■□□□ 1.32
MSL1-206ENST00000579565 TAF1LQ8IZX4 1826 aa23.31■■□□□ 1.32
MSL1-206ENST00000579565 ZNF827Q17R98 1081 aa23.31■■□□□ 1.32
MSL1-206ENST00000579565 FMNL2Q96PY5 1086 aa23.31■■□□□ 1.32
MSL1-206ENST00000579565 SLC4A9Q96Q91 983 aa23.31■■□□□ 1.32
MSL1-206ENST00000579565 SLC15A2Q16348 729 aa23.3■■□□□ 1.32
MSL1-206ENST00000579565 LINC00116Q8NCU8 138 aa23.3■■□□□ 1.32
MSL1-206ENST00000579565 TSPYL4Q9UJ04 414 aa23.3■■□□□ 1.32
MSL1-206ENST00000579565 C4BP0C0L5 1744 aa23.3■■□□□ 1.32
MSL1-206ENST00000579565 TJP1Q07157 1748 aa23.29■■□□□ 1.32
MSL1-206ENST00000579565 KCNQ3O43525 872 aa23.29■■□□□ 1.32
MSL1-206ENST00000579565 CALD1Q05682 793 aaKnown RBP23.29■■□□□ 1.32
MSL1-206ENST00000579565 ZNF496Q96IT1 587 aaPredicted RBP23.29■■□□□ 1.32
MSL1-206ENST00000579565 AK7Q96M32 723 aa23.29■■□□□ 1.32
MSL1-206ENST00000579565 SALL2Q9Y467 1007 aaPredicted RBP23.29■■□□□ 1.32
MSL1-206ENST00000579565 LAS1LQ9Y4W2 734 aaKnown RBP23.29■■□□□ 1.32
MSL1-206ENST00000579565 AKT1S1Q96B36 256 aa23.28■■□□□ 1.32
MSL1-206ENST00000579565 TFCP2L1Q9NZI6 479 aa23.28■■□□□ 1.32
MSL1-206ENST00000579565 KDM3BQ7LBC6 1761 aa23.28■■□□□ 1.32
MSL1-206ENST00000579565 VSIG10Q8N0Z9 540 aa23.27■■□□□ 1.32
MSL1-206ENST00000579565 CICQ96RK0 1608 aaPredicted RBP23.27■■□□□ 1.32
MSL1-206ENST00000579565 HEG1Q9ULI3 1381 aa23.27■■□□□ 1.32
MSL1-206ENST00000579565 DNAJC10Q8IXB1 793 aa23.26■■□□□ 1.31
MSL1-206ENST00000579565 COL5A3P25940 1745 aaPredicted RBP23.26■■□□□ 1.31
MSL1-206ENST00000579565 CCDC27Q2M243 656 aa23.25■■□□□ 1.31
MSL1-206ENST00000579565 BABAM1Q9NWV8 329 aa23.25■■□□□ 1.31
MSL1-206ENST00000579565 GNPATO15228 680 aa23.24■■□□□ 1.31
MSL1-206ENST00000579565 NCBP3Q53F19 620 aaKnown RBP23.24■■□□□ 1.31
MSL1-206ENST00000579565 WWC1Q8IX03 1113 aa23.24■■□□□ 1.31
MSL1-206ENST00000579565 CNTNAP4Q9C0A0 1308 aa23.23■■□□□ 1.31
MSL1-206ENST00000579565 CRKLP46109 303 aaKnown RBP23.22■■□□□ 1.31
MSL1-206ENST00000579565 NGEFQ8N5V2 710 aa23.22■■□□□ 1.31
MSL1-206ENST00000579565 TEX13AQ9BXU3 409 aaPredicted RBP23.22■■□□□ 1.31
MSL1-206ENST00000579565 TUBGCP6Q96RT7 1819 aa23.22■■□□□ 1.31
MSL1-206ENST00000579565 CHL1O00533 1208 aa23.21■■□□□ 1.31
MSL1-206ENST00000579565 STARD3NLO95772 234 aa23.21■■□□□ 1.31
MSL1-206ENST00000579565 SNRPA1P09661 255 aaKnown RBP23.21■■□□□ 1.31
MSL1-206ENST00000579565 GNAI1P63096 354 aa23.21■■□□□ 1.31
MSL1-206ENST00000579565 CFAP44Q96MT7 982 aa23.21■■□□□ 1.31
MSL1-206ENST00000579565 IFT57Q9NWB7 429 aa23.21■■□□□ 1.31
MSL1-206ENST00000579565 MSH5O43196 834 aa23.2■■□□□ 1.3
MSL1-206ENST00000579565 PHF14O94880 888 aa23.2■■□□□ 1.3
MSL1-206ENST00000579565 EIF4A1P60842 406 aaKnown RBP23.2■■□□□ 1.3
MSL1-206ENST00000579565 QSER1Q2KHR3 1735 aa23.2■■□□□ 1.3
MSL1-206ENST00000579565 PNPLA7Q6ZV29 1317 aa23.19■■□□□ 1.3
MSL1-206ENST00000579565 CYP19A1P11511 503 aaPredicted RBP23.19■■□□□ 1.3
MSL1-206ENST00000579565 RC3H1Q5TC82 1133 aaKnown RBP23.19■■□□□ 1.3
MSL1-206ENST00000579565 CCDC87Q9NVE4 849 aa23.19■■□□□ 1.3
MSL1-206ENST00000579565 RTCBQ9Y3I0 505 aaKnown RBP23.18■■□□□ 1.3
MSL1-206ENST00000579565 UBR3Q6ZT12 1888 aa23.17■■□□□ 1.3
MSL1-206ENST00000579565 FLAD1Q8NFF5 587 aa23.17■■□□□ 1.3
MSL1-206ENST00000579565 MBIPQ9NS73 344 aa23.17■■□□□ 1.3
MSL1-206ENST00000579565 CASZ1Q86V15 1759 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms