RNA–Protein interactions for RNA: ENST00000579245.1

ARHGAP28-209, Transcript of Rho GTPase activating protein 28, humanhuman

TSL 3

Gene ARHGAP28, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-209ENST00000579245 ESCO1Q5FWF5 840 aa8.5□□□□□ -1.05
ARHGAP28-209ENST00000579245 CYP4X1Q8N118 509 aa8.5□□□□□ -1.05
ARHGAP28-209ENST00000579245 SCG3Q8WXD2 468 aaKnown RBP8.5□□□□□ -1.05
ARHGAP28-209ENST00000579245 WASLO00401 505 aaPredicted RBP8.49□□□□□ -1.05
ARHGAP28-209ENST00000579245 CHMP7Q8WUX9 453 aaPredicted RBP8.49□□□□□ -1.05
ARHGAP28-209ENST00000579245 ITPKCQ96DU7 683 aa8.49□□□□□ -1.05
ARHGAP28-209ENST00000579245 PURBQ96QR8 312 aaKnown RBP8.49□□□□□ -1.05
ARHGAP28-209ENST00000579245 ATAD2Q6PL18 1390 aa8.48□□□□□ -1.05
ARHGAP28-209ENST00000579245 GDF9O60383 454 aa8.48□□□□□ -1.05
ARHGAP28-209ENST00000579245 ZIC2O95409 532 aaPredicted RBP8.48□□□□□ -1.05
ARHGAP28-209ENST00000579245 ADH1AP07327 375 aa8.48□□□□□ -1.05
ARHGAP28-209ENST00000579245 WDR4P57081 412 aaKnown RBP8.48□□□□□ -1.05
ARHGAP28-209ENST00000579245 CAPN12Q6ZSI9 719 aa8.48□□□□□ -1.05
ARHGAP28-209ENST00000579245 NPM2Q86SE8 214 aaKnown RBP8.48□□□□□ -1.05
ARHGAP28-209ENST00000579245 RGS22Q8NE09 1264 aa8.48□□□□□ -1.05
ARHGAP28-209ENST00000579245 TSPAN10Q9H1Z9 355 aaPredicted RBP8.48□□□□□ -1.05
ARHGAP28-209ENST00000579245 ANO2Q9NQ90 1003 aa8.48□□□□□ -1.05
ARHGAP28-209ENST00000579245 SOWAHDA6NJG2 315 aa8.47□□□□□ -1.05
ARHGAP28-209ENST00000579245 A6NJY4 79 aa8.47□□□□□ -1.05
ARHGAP28-209ENST00000579245 IGFBP4P22692 258 aa8.47□□□□□ -1.05
ARHGAP28-209ENST00000579245 TBCELQ5QJ74 424 aa8.47□□□□□ -1.05
ARHGAP28-209ENST00000579245 SLC4A9Q96Q91 983 aa8.47□□□□□ -1.05
ARHGAP28-209ENST00000579245 ZFAND3Q9H8U3 227 aa8.47□□□□□ -1.05
ARHGAP28-209ENST00000579245 BIN2Q9UBW5 565 aaPredicted RBP8.47□□□□□ -1.05
ARHGAP28-209ENST00000579245 SEPT3Q9UH03 358 aa8.47□□□□□ -1.05
ARHGAP28-209ENST00000579245 IL2RAP01589 272 aa8.46□□□□□ -1.06
ARHGAP28-209ENST00000579245 SMTNP53814 917 aa8.46□□□□□ -1.06
ARHGAP28-209ENST00000579245 EPHA4P54764 986 aa8.46□□□□□ -1.06
ARHGAP28-209ENST00000579245 ZNF211Q13398 564 aaPredicted RBP8.46□□□□□ -1.06
ARHGAP28-209ENST00000579245 NAA30Q147X3 362 aaPredicted RBP8.46□□□□□ -1.06
ARHGAP28-209ENST00000579245 FOXD4L5Q5VV16 416 aaPredicted RBP8.46□□□□□ -1.06
ARHGAP28-209ENST00000579245 FOXD4L4Q8WXT5 416 aaPredicted RBP8.46□□□□□ -1.06
ARHGAP28-209ENST00000579245 CNKSR1Q969H4 720 aa8.46□□□□□ -1.06
ARHGAP28-209ENST00000579245 AGBL1Q96MI9 1066 aa8.46□□□□□ -1.06
ARHGAP28-209ENST00000579245 A0A1W2PRU2 124 aa8.45□□□□□ -1.06
ARHGAP28-209ENST00000579245 C21orf2O43822 256 aa8.45□□□□□ -1.06
ARHGAP28-209ENST00000579245 PPP1R12BO60237 982 aaPredicted RBP8.45□□□□□ -1.06
ARHGAP28-209ENST00000579245 PTCD1O75127 700 aaKnown RBP8.45□□□□□ -1.06
ARHGAP28-209ENST00000579245 KDF1Q8NAX2 398 aaPredicted RBP8.45□□□□□ -1.06
ARHGAP28-209ENST00000579245 GTF3C2Q8WUA4 911 aaPredicted RBP8.45□□□□□ -1.06
ARHGAP28-209ENST00000579245 VTI1AQ96AJ9 217 aa8.45□□□□□ -1.06
ARHGAP28-209ENST00000579245 XAGE2Q96GT9 111 aa8.45□□□□□ -1.06
ARHGAP28-209ENST00000579245 KLF16Q9BXK1 252 aaPredicted RBP8.45□□□□□ -1.06
ARHGAP28-209ENST00000579245 MEN1O00255 615 aa8.44□□□□□ -1.06
ARHGAP28-209ENST00000579245 FOXO3O43524 673 aa8.44□□□□□ -1.06
ARHGAP28-209ENST00000579245 TIMP2P16035 220 aa8.44□□□□□ -1.06
ARHGAP28-209ENST00000579245 PTGIRP43119 386 aa8.44□□□□□ -1.06
ARHGAP28-209ENST00000579245 RELBQ01201 579 aa8.44□□□□□ -1.06
ARHGAP28-209ENST00000579245 TLR1Q15399 786 aa8.44□□□□□ -1.06
ARHGAP28-209ENST00000579245 Q6ZVU0 165 aa8.44□□□□□ -1.06
ARHGAP28-209ENST00000579245 SLC9A9Q8IVB4 645 aa8.44□□□□□ -1.06
ARHGAP28-209ENST00000579245 ESYT1Q9BSJ8 1104 aa8.44□□□□□ -1.06
ARHGAP28-209ENST00000579245 TOR4AQ9NXH8 423 aa8.44□□□□□ -1.06
ARHGAP28-209ENST00000579245 SCHIP1Q9P0W5 487 aaPredicted RBP8.44□□□□□ -1.06
ARHGAP28-209ENST00000579245 H3BRB1 525 aa8.43□□□□□ -1.06
ARHGAP28-209ENST00000579245 SMPD1P17405 629 aa8.43□□□□□ -1.06
ARHGAP28-209ENST00000579245 MTFR1Q15390 333 aa8.43□□□□□ -1.06
ARHGAP28-209ENST00000579245 TUT1Q9H6E5 874 aaKnown RBP8.43□□□□□ -1.06
ARHGAP28-209ENST00000579245 ZNF395Q9H8N7 513 aaPredicted RBP8.43□□□□□ -1.06
ARHGAP28-209ENST00000579245 FOXK2Q01167 660 aa8.42□□□□□ -1.06
ARHGAP28-209ENST00000579245 CLN3Q13286 438 aa8.42□□□□□ -1.06
ARHGAP28-209ENST00000579245 MTMR3Q13615 1198 aa8.42□□□□□ -1.06
ARHGAP28-209ENST00000579245 GLYCTKQ8IVS8 523 aa8.42□□□□□ -1.06
ARHGAP28-209ENST00000579245 NLRP3Q96P20 1036 aa8.42□□□□□ -1.06
ARHGAP28-209ENST00000579245 EGFL7Q9UHF1 273 aa8.42□□□□□ -1.06
ARHGAP28-209ENST00000579245 DNMT3AQ9Y6K1 912 aaPredicted RBP8.42□□□□□ -1.06
ARHGAP28-209ENST00000579245 ICMTO60725 284 aa8.41□□□□□ -1.06
ARHGAP28-209ENST00000579245 CENPCQ03188 943 aa8.41□□□□□ -1.06
ARHGAP28-209ENST00000579245 TRIM67Q6ZTA4 783 aa8.41□□□□□ -1.06
ARHGAP28-209ENST00000579245 HPS1Q92902 700 aa8.41□□□□□ -1.06
ARHGAP28-209ENST00000579245 CHMP3Q9Y3E7 222 aa8.41□□□□□ -1.06
ARHGAP28-209ENST00000579245 USP3Q9Y6I4 520 aa8.41□□□□□ -1.06
ARHGAP28-209ENST00000579245 CDK2AP1O14519 115 aa8.4□□□□□ -1.06
ARHGAP28-209ENST00000579245 PSMA6P60900 246 aaKnown RBP8.4□□□□□ -1.06
ARHGAP28-209ENST00000579245 COL26A1Q96A83 441 aa8.4□□□□□ -1.06
ARHGAP28-209ENST00000579245 HRH3Q9Y5N1 445 aa8.4□□□□□ -1.06
ARHGAP28-209ENST00000579245 PRR20EP86478 221 aa8.39□□□□□ -1.07
ARHGAP28-209ENST00000579245 PRR20CP86479 221 aa8.39□□□□□ -1.07
ARHGAP28-209ENST00000579245 PRR20DP86480 221 aa8.39□□□□□ -1.07
ARHGAP28-209ENST00000579245 PRR20BP86481 221 aa8.39□□□□□ -1.07
ARHGAP28-209ENST00000579245 PRR20AP86496 221 aa8.39□□□□□ -1.07
ARHGAP28-209ENST00000579245 FKBP4Q02790 459 aaKnown RBP eCLIP8.39□□□□□ -1.07
ARHGAP28-209ENST00000579245 C2orf49Q9BVC5 232 aaPredicted RBP8.39□□□□□ -1.07
ARHGAP28-209ENST00000579245 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.39□□□□□ -1.07
ARHGAP28-209ENST00000579245 CABP1Q9NZU7 370 aa8.39□□□□□ -1.07
ARHGAP28-209ENST00000579245 IQSEC3Q9UPP2 1182 aaPredicted RBP8.39□□□□□ -1.07
ARHGAP28-209ENST00000579245 RANGAP1P46060 587 aaPredicted RBP8.38□□□□□ -1.07
ARHGAP28-209ENST00000579245 MARSP56192 900 aaKnown RBP8.38□□□□□ -1.07
ARHGAP28-209ENST00000579245 NBPF15Q8N660 670 aa8.38□□□□□ -1.07
ARHGAP28-209ENST00000579245 ZSCAN10Q96SZ4 725 aaPredicted RBP8.38□□□□□ -1.07
ARHGAP28-209ENST00000579245 FHDC1Q9C0D6 1143 aaPredicted RBP8.38□□□□□ -1.07
ARHGAP28-209ENST00000579245 SAP130Q9H0E3 1048 aa8.38□□□□□ -1.07
ARHGAP28-209ENST00000579245 SF3B2Q13435 895 aaKnown RBP8.37□□□□□ -1.07
ARHGAP28-209ENST00000579245 SH3PXD2AQ5TCZ1 1133 aa8.37□□□□□ -1.07
ARHGAP28-209ENST00000579245 TMEM214Q6NUQ4 689 aaKnown RBP8.37□□□□□ -1.07
ARHGAP28-209ENST00000579245 C16orf46Q6P387 395 aa8.37□□□□□ -1.07
ARHGAP28-209ENST00000579245 MEIOBQ8N635 442 aa8.37□□□□□ -1.07
ARHGAP28-209ENST00000579245 HELQQ8TDG4 1101 aa8.37□□□□□ -1.07
ARHGAP28-209ENST00000579245 NGLY1Q96IV0 654 aa8.37□□□□□ -1.07
ARHGAP28-209ENST00000579245 ZNF232Q9UNY5 417 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms