RNA–Protein interactions for RNA: ENST00000579243.1

USH1G-201, Transcript of USH1 protein network component sans, humanhuman

TSL 2

Gene USH1G, Length 1,673 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1G-201ENST00000579243 NFATC2IPQ8NCF5 419 aa26.5■■□□□ 1.83
USH1G-201ENST00000579243 RNMTO43148 476 aaKnown RBP26.5■■□□□ 1.83
USH1G-201ENST00000579243 GAS2L2Q8NHY3 880 aa26.5■■□□□ 1.83
USH1G-201ENST00000579243 PNISRQ8TF01 805 aaKnown RBP26.5■■□□□ 1.83
USH1G-201ENST00000579243 PDGFDQ9GZP0 370 aaPredicted RBP26.49■■□□□ 1.83
USH1G-201ENST00000579243 LOC102724428A0A0B4J2F2 783 aa26.47■■□□□ 1.83
USH1G-201ENST00000579243 SIK1P57059 783 aa26.47■■□□□ 1.83
USH1G-201ENST00000579243 HMGB2P26583 209 aaKnown RBP26.46■■□□□ 1.83
USH1G-201ENST00000579243 SLC52A2Q9HAB3 445 aa26.46■■□□□ 1.83
USH1G-201ENST00000579243 SCN11AQ9UI33 1791 aa26.46■■□□□ 1.83
USH1G-201ENST00000579243 GNAT3A8MTJ3 354 aa26.45■■□□□ 1.82
USH1G-201ENST00000579243 TFCP2L1Q9NZI6 479 aa26.44■■□□□ 1.82
USH1G-201ENST00000579243 MAP3K5Q99683 1374 aa26.43■■□□□ 1.82
USH1G-201ENST00000579243 GTF3C3Q9Y5Q9 886 aa26.43■■□□□ 1.82
USH1G-201ENST00000579243 LRP5O75197 1615 aa26.42■■□□□ 1.82
USH1G-201ENST00000579243 ATP6V1AP38606 617 aa26.42■■□□□ 1.82
USH1G-201ENST00000579243 IL17REQ8NFR9 667 aa26.42■■□□□ 1.82
USH1G-201ENST00000579243 CASZ1Q86V15 1759 aa26.42■■□□□ 1.82
USH1G-201ENST00000579243 ADAMTS7Q9UKP4 1686 aa26.41■■□□□ 1.82
USH1G-201ENST00000579243 ITPK1Q13572 414 aa26.41■■□□□ 1.82
USH1G-201ENST00000579243 SLC4A9Q96Q91 983 aa26.41■■□□□ 1.82
USH1G-201ENST00000579243 RBM42Q9BTD8 480 aaKnown RBP26.41■■□□□ 1.82
USH1G-201ENST00000579243 SPON1Q9HCB6 807 aa26.41■■□□□ 1.82
USH1G-201ENST00000579243 ZBED9Q6R2W3 1325 aa26.41■■□□□ 1.82
USH1G-201ENST00000579243 MRC1P22897 1456 aa26.4■■□□□ 1.82
USH1G-201ENST00000579243 PNPLA7Q6ZV29 1317 aa26.4■■□□□ 1.82
USH1G-201ENST00000579243 PLEKHF1Q96S99 279 aa26.4■■□□□ 1.82
USH1G-201ENST00000579243 C5P01031 1676 aa26.39■■□□□ 1.82
USH1G-201ENST00000579243 ZBTB7AO95365 584 aa26.39■■□□□ 1.82
USH1G-201ENST00000579243 LINC00116Q8NCU8 138 aa26.38■■□□□ 1.81
USH1G-201ENST00000579243 TAF1LQ8IZX4 1826 aa26.38■■□□□ 1.81
USH1G-201ENST00000579243 PTCD1O75127 700 aaKnown RBP26.37■■□□□ 1.81
USH1G-201ENST00000579243 PNNQ9H307 717 aaKnown RBP26.37■■□□□ 1.81
USH1G-201ENST00000579243 NEFMP07197 916 aa26.36■■□□□ 1.81
USH1G-201ENST00000579243 VIRMAQ69YN4 1812 aaKnown RBP26.36■■□□□ 1.81
USH1G-201ENST00000579243 MTFR1LQ9H019 292 aa26.35■■□□□ 1.81
USH1G-201ENST00000579243 ATF5Q9Y2D1 282 aaPredicted RBP26.35■■□□□ 1.81
USH1G-201ENST00000579243 CEMIPQ8WUJ3 1361 aa26.35■■□□□ 1.81
USH1G-201ENST00000579243 QSER1Q2KHR3 1735 aa26.35■■□□□ 1.81
USH1G-201ENST00000579243 TEFQ10587 303 aa26.34■■□□□ 1.81
USH1G-201ENST00000579243 SLC39A6Q13433 755 aa26.34■■□□□ 1.81
USH1G-201ENST00000579243 AK7Q96M32 723 aa26.34■■□□□ 1.81
USH1G-201ENST00000579243 C4BP0C0L5 1744 aa26.34■■□□□ 1.81
USH1G-201ENST00000579243 COL23A1Q86Y22 540 aaPredicted RBP26.33■■□□□ 1.81
USH1G-201ENST00000579243 SLC16A10Q8TF71 515 aa26.33■■□□□ 1.81
USH1G-201ENST00000579243 TUBGCP6Q96RT7 1819 aa26.33■■□□□ 1.81
USH1G-201ENST00000579243 HTATSF1O43719 755 aaKnown RBP26.32■■□□□ 1.8
USH1G-201ENST00000579243 RTF1Q92541 710 aaKnown RBP26.32■■□□□ 1.8
USH1G-201ENST00000579243 ZNF831Q5JPB2 1677 aa26.32■■□□□ 1.8
USH1G-201ENST00000579243 PTGER2P43116 358 aa26.31■■□□□ 1.8
USH1G-201ENST00000579243 MCM10Q7L590 875 aa26.31■■□□□ 1.8
USH1G-201ENST00000579243 AMIGO3Q86WK7 504 aa26.31■■□□□ 1.8
USH1G-201ENST00000579243 FLAD1Q8NFF5 587 aa26.31■■□□□ 1.8
USH1G-201ENST00000579243 NFE2L2Q16236 605 aa26.29■■□□□ 1.8
USH1G-201ENST00000579243 MAPK8IP3Q9UPT6 1336 aa26.29■■□□□ 1.8
USH1G-201ENST00000579243 MSH5O43196 834 aa26.28■■□□□ 1.8
USH1G-201ENST00000579243 DCTN1Q14203 1278 aa26.28■■□□□ 1.8
USH1G-201ENST00000579243 WDR43Q15061 677 aaKnown RBP eCLIP26.28■■□□□ 1.8
USH1G-201ENST00000579243 RC3H1Q5TC82 1133 aaKnown RBP26.28■■□□□ 1.8
USH1G-201ENST00000579243 GNPATO15228 680 aa26.28■■□□□ 1.8
USH1G-201ENST00000579243 SMIM5Q71RC9 77 aa26.28■■□□□ 1.8
USH1G-201ENST00000579243 SGIP1Q9BQI5 828 aa26.28■■□□□ 1.8
USH1G-201ENST00000579243 ADAMTS8Q9UP79 889 aa26.27■■□□□ 1.8
USH1G-201ENST00000579243 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.26■■□□□ 1.79
USH1G-201ENST00000579243 SSFA2P28290 1259 aa26.26■■□□□ 1.79
USH1G-201ENST00000579243 ZNF790Q6PG37 636 aa26.26■■□□□ 1.79
USH1G-201ENST00000579243 TTC5Q8N0Z6 440 aa26.26■■□□□ 1.79
USH1G-201ENST00000579243 PPP1R1BQ9UD71 204 aaPredicted RBP26.26■■□□□ 1.79
USH1G-201ENST00000579243 CNTNAP4Q9C0A0 1308 aa26.26■■□□□ 1.79
USH1G-201ENST00000579243 PHF14O94880 888 aa26.25■■□□□ 1.79
USH1G-201ENST00000579243 KCPQ6ZWJ8 1503 aa26.25■■□□□ 1.79
USH1G-201ENST00000579243 BTBD11A6QL63 1104 aa26.25■■□□□ 1.79
USH1G-201ENST00000579243 SIPA1L3O60292 1781 aaPredicted RBP26.25■■□□□ 1.79
USH1G-201ENST00000579243 UBR3Q6ZT12 1888 aa26.24■■□□□ 1.79
USH1G-201ENST00000579243 DNAJC10Q8IXB1 793 aa26.24■■□□□ 1.79
USH1G-201ENST00000579243 VSIG10Q8N0Z9 540 aa26.24■■□□□ 1.79
USH1G-201ENST00000579243 COL5A3P25940 1745 aaPredicted RBP26.23■■□□□ 1.79
USH1G-201ENST00000579243 CRKLP46109 303 aaKnown RBP26.22■■□□□ 1.79
USH1G-201ENST00000579243 CCDC146Q8IYE0 955 aa26.22■■□□□ 1.79
USH1G-201ENST00000579243 RTCBQ9Y3I0 505 aaKnown RBP26.22■■□□□ 1.79
USH1G-201ENST00000579243 ZNF496Q96IT1 587 aaPredicted RBP26.22■■□□□ 1.79
USH1G-201ENST00000579243 CICQ96RK0 1608 aaPredicted RBP26.21■■□□□ 1.79
USH1G-201ENST00000579243 RPS6KA4O75676 772 aa26.21■■□□□ 1.79
USH1G-201ENST00000579243 RUNDC1Q96C34 613 aa26.21■■□□□ 1.79
USH1G-201ENST00000579243 TJP1Q07157 1748 aa26.21■■□□□ 1.79
USH1G-201ENST00000579243 DLG5Q8TDM6 1919 aa26.2■■□□□ 1.78
USH1G-201ENST00000579243 KCNQ3O43525 872 aa26.2■■□□□ 1.78
USH1G-201ENST00000579243 RIPK4P57078 832 aa26.2■■□□□ 1.78
USH1G-201ENST00000579243 TAF7Q15545 349 aaPredicted RBP26.2■■□□□ 1.78
USH1G-201ENST00000579243 UBR2Q8IWV8 1755 aa26.2■■□□□ 1.78
USH1G-201ENST00000579243 CYP19A1P11511 503 aaPredicted RBP26.19■■□□□ 1.78
USH1G-201ENST00000579243 TMPOP42166 694 aaKnown RBP26.19■■□□□ 1.78
USH1G-201ENST00000579243 TRAPPC3LQ5T215 181 aa26.19■■□□□ 1.78
USH1G-201ENST00000579243 INTS5Q6P9B9 1019 aaKnown RBP26.19■■□□□ 1.78
USH1G-201ENST00000579243 MYH14Q7Z406 1995 aaKnown RBP26.19■■□□□ 1.78
USH1G-201ENST00000579243 POLD1P28340 1107 aa26.18■■□□□ 1.78
USH1G-201ENST00000579243 MSL1Q68DK7 614 aa26.18■■□□□ 1.78
USH1G-201ENST00000579243 FMNL2Q96PY5 1086 aa26.18■■□□□ 1.78
USH1G-201ENST00000579243 ARXQ96QS3 562 aa26.18■■□□□ 1.78
USH1G-201ENST00000579243 HEG1Q9ULI3 1381 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms