RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 ASAP1Q9ULH1 1129 aa20.41■□□□□ 0.86
SLC6A4-205ENST00000579221 KAT6BQ8WYB5 2073 aa20.41■□□□□ 0.86
SLC6A4-205ENST00000579221 EZH2Q15910 746 aaKnown RBP20.4■□□□□ 0.86
SLC6A4-205ENST00000579221 TOGARAM1Q9Y4F4 1720 aa20.39■□□□□ 0.86
SLC6A4-205ENST00000579221 BTBD11A6QL63 1104 aa20.39■□□□□ 0.85
SLC6A4-205ENST00000579221 THUMPD2Q9BTF0 503 aaKnown RBP20.39■□□□□ 0.85
SLC6A4-205ENST00000579221 SCN11AQ9UI33 1791 aa20.39■□□□□ 0.85
SLC6A4-205ENST00000579221 CALD1Q05682 793 aaKnown RBP20.38■□□□□ 0.85
SLC6A4-205ENST00000579221 CCDC27Q2M243 656 aa20.38■□□□□ 0.85
SLC6A4-205ENST00000579221 ADAMTS7Q9UKP4 1686 aa20.38■□□□□ 0.85
SLC6A4-205ENST00000579221 PALLDQ8WX93 1383 aa20.37■□□□□ 0.85
SLC6A4-205ENST00000579221 SENP3-EIF4A1A0A087X0R7 540 aa20.37■□□□□ 0.85
SLC6A4-205ENST00000579221 HMGB2P26583 209 aaKnown RBP20.37■□□□□ 0.85
SLC6A4-205ENST00000579221 SLC39A6Q13433 755 aa20.37■□□□□ 0.85
SLC6A4-205ENST00000579221 TXNRD1Q16881 649 aa20.37■□□□□ 0.85
SLC6A4-205ENST00000579221 SLC27A3Q5K4L6 730 aa20.37■□□□□ 0.85
SLC6A4-205ENST00000579221 TTC5Q8N0Z6 440 aa20.37■□□□□ 0.85
SLC6A4-205ENST00000579221 SALL2Q9Y467 1007 aaPredicted RBP20.37■□□□□ 0.85
SLC6A4-205ENST00000579221 MRC1P22897 1456 aa20.37■□□□□ 0.85
SLC6A4-205ENST00000579221 ITGB4P16144 1822 aa20.37■□□□□ 0.85
SLC6A4-205ENST00000579221 TNS1Q9HBL0 1735 aaKnown RBP20.36■□□□□ 0.85
SLC6A4-205ENST00000579221 PROM2Q8N271 834 aa20.36■□□□□ 0.85
SLC6A4-205ENST00000579221 RBM42Q9BTD8 480 aaKnown RBP20.36■□□□□ 0.85
SLC6A4-205ENST00000579221 BTAF1O14981 1849 aa20.35■□□□□ 0.85
SLC6A4-205ENST00000579221 ZNF790Q6PG37 636 aa20.35■□□□□ 0.85
SLC6A4-205ENST00000579221 WWC1Q8IX03 1113 aa20.35■□□□□ 0.85
SLC6A4-205ENST00000579221 BABAM1Q9NWV8 329 aa20.35■□□□□ 0.85
SLC6A4-205ENST00000579221 DLG5Q8TDM6 1919 aa20.34■□□□□ 0.85
SLC6A4-205ENST00000579221 LOC102724428A0A0B4J2F2 783 aa20.34■□□□□ 0.85
SLC6A4-205ENST00000579221 PTCD1O75127 700 aaKnown RBP20.34■□□□□ 0.85
SLC6A4-205ENST00000579221 SIK1P57059 783 aa20.34■□□□□ 0.85
SLC6A4-205ENST00000579221 CCNL1Q9UK58 526 aaPredicted RBP20.34■□□□□ 0.85
SLC6A4-205ENST00000579221 MIS18AQ9NYP9 233 aa20.33■□□□□ 0.85
SLC6A4-205ENST00000579221 LAS1LQ9Y4W2 734 aaKnown RBP20.33■□□□□ 0.85
SLC6A4-205ENST00000579221 ATP6V1AP38606 617 aa20.32■□□□□ 0.84
SLC6A4-205ENST00000579221 TSPYL4Q9UJ04 414 aa20.32■□□□□ 0.84
SLC6A4-205ENST00000579221 EP400Q96L91 3159 aa20.32■□□□□ 0.84
SLC6A4-205ENST00000579221 WDR63Q8IWG1 891 aa20.31■□□□□ 0.84
SLC6A4-205ENST00000579221 CHL1O00533 1208 aa20.3■□□□□ 0.84
SLC6A4-205ENST00000579221 KCNQ3O43525 872 aa20.3■□□□□ 0.84
SLC6A4-205ENST00000579221 GNAI1P63096 354 aa20.3■□□□□ 0.84
SLC6A4-205ENST00000579221 NBPF14Q5TI25 921 aa20.3■□□□□ 0.84
SLC6A4-205ENST00000579221 CFAP44Q96MT7 982 aa20.3■□□□□ 0.84
SLC6A4-205ENST00000579221 FMNL2Q96PY5 1086 aa20.3■□□□□ 0.84
SLC6A4-205ENST00000579221 LRRC4BQ9NT99 713 aa20.3■□□□□ 0.84
SLC6A4-205ENST00000579221 KCNQ4P56696 695 aa20.29■□□□□ 0.84
SLC6A4-205ENST00000579221 VSIG10Q8N0Z9 540 aa20.29■□□□□ 0.84
SLC6A4-205ENST00000579221 IFT57Q9NWB7 429 aa20.29■□□□□ 0.84
SLC6A4-205ENST00000579221 ZNF496Q96IT1 587 aaPredicted RBP20.28■□□□□ 0.84
SLC6A4-205ENST00000579221 IL16Q14005 1332 aa20.27■□□□□ 0.84
SLC6A4-205ENST00000579221 VIRMAQ69YN4 1812 aaKnown RBP20.27■□□□□ 0.84
SLC6A4-205ENST00000579221 ZNF853P0CG23 659 aa20.27■□□□□ 0.84
SLC6A4-205ENST00000579221 SLC4A9Q96Q91 983 aa20.27■□□□□ 0.84
SLC6A4-205ENST00000579221 TEX13AQ9BXU3 409 aaPredicted RBP20.27■□□□□ 0.84
SLC6A4-205ENST00000579221 RGPD3A6NKT7 1758 aaPredicted RBP20.26■□□□□ 0.83
SLC6A4-205ENST00000579221 RGPD4Q7Z3J3 1758 aa20.26■□□□□ 0.83
SLC6A4-205ENST00000579221 SIPA1L3O60292 1781 aaPredicted RBP20.26■□□□□ 0.83
SLC6A4-205ENST00000579221 EIF4A1P60842 406 aaKnown RBP20.25■□□□□ 0.83
SLC6A4-205ENST00000579221 ITPK1Q13572 414 aa20.25■□□□□ 0.83
SLC6A4-205ENST00000579221 HEG1Q9ULI3 1381 aa20.24■□□□□ 0.83
SLC6A4-205ENST00000579221 SNRPA1P09661 255 aaKnown RBP20.24■□□□□ 0.83
SLC6A4-205ENST00000579221 MBIPQ9NS73 344 aa20.24■□□□□ 0.83
SLC6A4-205ENST00000579221 STK32BQ9NY57 414 aa20.24■□□□□ 0.83
SLC6A4-205ENST00000579221 LY75O60449 1722 aa20.24■□□□□ 0.83
SLC6A4-205ENST00000579221 HNRNPUQ00839 825 aaKnown RBP eCLIP20.23■□□□□ 0.83
SLC6A4-205ENST00000579221 DNAJC10Q8IXB1 793 aa20.23■□□□□ 0.83
SLC6A4-205ENST00000579221 KCPQ6ZWJ8 1503 aa20.22■□□□□ 0.83
SLC6A4-205ENST00000579221 STARD3NLO95772 234 aa20.22■□□□□ 0.83
SLC6A4-205ENST00000579221 LINC00116Q8NCU8 138 aa20.22■□□□□ 0.83
SLC6A4-205ENST00000579221 PAPPAQ13219 1627 aa20.22■□□□□ 0.83
SLC6A4-205ENST00000579221 ZNF521Q96K83 1311 aa20.22■□□□□ 0.83
SLC6A4-205ENST00000579221 GOLGA2Q08379 1002 aa20.21■□□□□ 0.83
SLC6A4-205ENST00000579221 SLC15A2Q16348 729 aa20.21■□□□□ 0.83
SLC6A4-205ENST00000579221 RC3H1Q5TC82 1133 aaKnown RBP20.21■□□□□ 0.83
SLC6A4-205ENST00000579221 AKT1S1Q96B36 256 aa20.21■□□□□ 0.83
SLC6A4-205ENST00000579221 GIGYF1O75420 1035 aaPredicted RBP20.2■□□□□ 0.82
SLC6A4-205ENST00000579221 CYP19A1P11511 503 aaPredicted RBP20.2■□□□□ 0.82
SLC6A4-205ENST00000579221 AK7Q96M32 723 aa20.2■□□□□ 0.82
SLC6A4-205ENST00000579221 MYH16Q9H6N6 1097 aa20.2■□□□□ 0.82
SLC6A4-205ENST00000579221 RREB1Q92766 1687 aa20.19■□□□□ 0.82
SLC6A4-205ENST00000579221 TFCP2L1Q9NZI6 479 aa20.19■□□□□ 0.82
SLC6A4-205ENST00000579221 USP16Q9Y5T5 823 aa20.19■□□□□ 0.82
SLC6A4-205ENST00000579221 CRKLP46109 303 aaKnown RBP20.18■□□□□ 0.82
SLC6A4-205ENST00000579221 ANO8Q9HCE9 1232 aaPredicted RBP20.18■□□□□ 0.82
SLC6A4-205ENST00000579221 CNTNAP4Q9C0A0 1308 aa20.18■□□□□ 0.82
SLC6A4-205ENST00000579221 ZNF831Q5JPB2 1677 aa20.17■□□□□ 0.82
SLC6A4-205ENST00000579221 PRAMEF22A3QJZ6 481 aa20.17■□□□□ 0.82
SLC6A4-205ENST00000579221 E9PSI1 815 aa20.17■□□□□ 0.82
SLC6A4-205ENST00000579221 ZNF827Q17R98 1081 aa20.17■□□□□ 0.82
SLC6A4-205ENST00000579221 TSR2Q969E8 191 aaKnown RBP20.17■□□□□ 0.82
SLC6A4-205ENST00000579221 CCDC87Q9NVE4 849 aa20.17■□□□□ 0.82
SLC6A4-205ENST00000579221 UBR2Q8IWV8 1755 aa20.16■□□□□ 0.82
SLC6A4-205ENST00000579221 SPINK5Q9NQ38 1064 aaPredicted RBP20.16■□□□□ 0.82
SLC6A4-205ENST00000579221 NUP188Q5SRE5 1749 aa20.16■□□□□ 0.82
SLC6A4-205ENST00000579221 KDM3BQ7LBC6 1761 aa20.16■□□□□ 0.82
SLC6A4-205ENST00000579221 GNPATO15228 680 aa20.15■□□□□ 0.82
SLC6A4-205ENST00000579221 RPS6KA4O75676 772 aa20.15■□□□□ 0.82
SLC6A4-205ENST00000579221 R3HDM1Q15032 1099 aaKnown RBP20.15■□□□□ 0.82
SLC6A4-205ENST00000579221 DUSP27Q5VZP5 1158 aa20.15■□□□□ 0.82
SLC6A4-205ENST00000579221 INTS5Q6P9B9 1019 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms