RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 NBPF4Q96M43 638 aa16.04■□□□□ 0.16
GGA3-206ENST00000578773 PIGBQ92521 554 aa16.03■□□□□ 0.16
GGA3-206ENST00000578773 PRDM10Q9NQV6 1147 aa16.03■□□□□ 0.16
GGA3-206ENST00000578773 DLEC1Q9Y238 1755 aa16.03■□□□□ 0.16
GGA3-206ENST00000578773 DICER1Q9UPY3 1922 aaKnown RBP16.02■□□□□ 0.16
GGA3-206ENST00000578773 POTECB2RU33 542 aa16.02■□□□□ 0.16
GGA3-206ENST00000578773 CYP27B1O15528 508 aa16.02■□□□□ 0.16
GGA3-206ENST00000578773 AFDNP55196 1824 aaKnown RBP16.02■□□□□ 0.16
GGA3-206ENST00000578773 KDM6AO15550 1401 aaPredicted RBP16.02■□□□□ 0.15
GGA3-206ENST00000578773 LOC102724428A0A0B4J2F2 783 aa16.01■□□□□ 0.15
GGA3-206ENST00000578773 CHRNA5P30532 468 aa16.01■□□□□ 0.15
GGA3-206ENST00000578773 LBX1P52954 281 aa16.01■□□□□ 0.15
GGA3-206ENST00000578773 SIK1P57059 783 aa16.01■□□□□ 0.15
GGA3-206ENST00000578773 EDC4Q6P2E9 1401 aaKnown RBP16■□□□□ 0.15
GGA3-206ENST00000578773 POTEIP0CG38 1075 aa15.99■□□□□ 0.15
GGA3-206ENST00000578773 POTEJP0CG39 1038 aa15.99■□□□□ 0.15
GGA3-206ENST00000578773 CCDC87Q9NVE4 849 aa15.99■□□□□ 0.15
GGA3-206ENST00000578773 A0A1W2PP64 1363 aa15.99■□□□□ 0.15
GGA3-206ENST00000578773 GYS1P13807 737 aa15.98■□□□□ 0.15
GGA3-206ENST00000578773 VEGFAP15692 232 aaPredicted RBP15.98■□□□□ 0.15
GGA3-206ENST00000578773 MLLT1Q03111 559 aaPredicted RBP15.98■□□□□ 0.15
GGA3-206ENST00000578773 DALRD3Q5D0E6 543 aaKnown RBP15.98■□□□□ 0.15
GGA3-206ENST00000578773 PIM2Q9P1W9 311 aa15.98■□□□□ 0.15
GGA3-206ENST00000578773 ASAP1Q9ULH1 1129 aa15.98■□□□□ 0.15
GGA3-206ENST00000578773 CNTNAP1P78357 1384 aa15.98■□□□□ 0.15
GGA3-206ENST00000578773 PCDH11XQ9BZA7 1347 aa15.97■□□□□ 0.15
GGA3-206ENST00000578773 PCDH11YQ9BZA8 1340 aa15.97■□□□□ 0.15
GGA3-206ENST00000578773 GLTPD2A6NH11 291 aa15.97■□□□□ 0.15
GGA3-206ENST00000578773 CTCFP49711 727 aaPredicted RBP15.97■□□□□ 0.15
GGA3-206ENST00000578773 TMF1P82094 1093 aa15.97■□□□□ 0.15
GGA3-206ENST00000578773 SMARCC1Q92922 1105 aaPredicted RBP15.97■□□□□ 0.15
GGA3-206ENST00000578773 PDE4DIPQ5VU43 2346 aa15.96■□□□□ 0.15
GGA3-206ENST00000578773 ADAMTS7Q9UKP4 1686 aa15.96■□□□□ 0.15
GGA3-206ENST00000578773 SLC12A5Q9H2X9 1139 aa15.96■□□□□ 0.15
GGA3-206ENST00000578773 CREBZFQ9NS37 354 aa15.96■□□□□ 0.15
GGA3-206ENST00000578773 CACNA1SQ13698 1873 aa15.95■□□□□ 0.14
GGA3-206ENST00000578773 HSPA8P11142 646 aaKnown RBP15.95■□□□□ 0.14
GGA3-206ENST00000578773 AMPHP49418 695 aa15.95■□□□□ 0.14
GGA3-206ENST00000578773 ARHGEF1Q92888 912 aaKnown RBP15.95■□□□□ 0.14
GGA3-206ENST00000578773 SLC4A9Q96Q91 983 aa15.95■□□□□ 0.14
GGA3-206ENST00000578773 ZNF831Q5JPB2 1677 aa15.95■□□□□ 0.14
GGA3-206ENST00000578773 CCDC85CA6NKD9 419 aa15.94■□□□□ 0.14
GGA3-206ENST00000578773 TATP17735 454 aaPredicted RBP15.94■□□□□ 0.14
GGA3-206ENST00000578773 ATP6V1AP38606 617 aa15.94■□□□□ 0.14
GGA3-206ENST00000578773 VEGFBP49765 207 aa15.94■□□□□ 0.14
GGA3-206ENST00000578773 DDR1Q08345 913 aa15.94■□□□□ 0.14
GGA3-206ENST00000578773 RRS1Q15050 365 aaKnown RBP15.94■□□□□ 0.14
GGA3-206ENST00000578773 TMC1Q8TDI8 760 aa15.94■□□□□ 0.14
GGA3-206ENST00000578773 RAPGEF4Q8WZA2 1011 aa15.94■□□□□ 0.14
GGA3-206ENST00000578773 KDRP35968 1356 aa15.94■□□□□ 0.14
GGA3-206ENST00000578773 NLGN1Q8N2Q7 840 aa15.93■□□□□ 0.14
GGA3-206ENST00000578773 PARP3Q9Y6F1 533 aa15.93■□□□□ 0.14
GGA3-206ENST00000578773 FER1L6Q2WGJ9 1857 aa15.93■□□□□ 0.14
GGA3-206ENST00000578773 RGS19P49795 217 aa15.92■□□□□ 0.14
GGA3-206ENST00000578773 WBP1LQ9NX94 342 aa15.92■□□□□ 0.14
GGA3-206ENST00000578773 SRP68Q9UHB9 627 aaKnown RBP15.92■□□□□ 0.14
GGA3-206ENST00000578773 CGNL1Q0VF96 1302 aa15.92■□□□□ 0.14
GGA3-206ENST00000578773 TRAPPC3LQ5T215 181 aa15.91■□□□□ 0.14
GGA3-206ENST00000578773 AIDAQ96BJ3 306 aa15.91■□□□□ 0.14
GGA3-206ENST00000578773 TJP1Q07157 1748 aa15.91■□□□□ 0.14
GGA3-206ENST00000578773 ATG3Q9NT62 314 aa15.9■□□□□ 0.14
GGA3-206ENST00000578773 RTCBQ9Y3I0 505 aaKnown RBP15.9■□□□□ 0.14
GGA3-206ENST00000578773 NRXN2Q9P2S2 1712 aa15.9■□□□□ 0.14
GGA3-206ENST00000578773 ANKRD31Q8N7Z5 1873 aa15.89■□□□□ 0.13
GGA3-206ENST00000578773 LMNB1P20700 586 aa15.89■□□□□ 0.13
GGA3-206ENST00000578773 HDGFL2Q7Z4V5 671 aaPredicted RBP15.89■□□□□ 0.13
GGA3-206ENST00000578773 CASP8AP2Q9UKL3 1982 aa15.89■□□□□ 0.13
GGA3-206ENST00000578773 ZC3H4Q9UPT8 1303 aaKnown RBP15.89■□□□□ 0.13
GGA3-206ENST00000578773 RTL1A6NKG5 1358 aa15.88■□□□□ 0.13
GGA3-206ENST00000578773 COL11A2P13942 1736 aaPredicted RBP15.88■□□□□ 0.13
GGA3-206ENST00000578773 THSD7BQ9C0I4 1608 aa15.88■□□□□ 0.13
GGA3-206ENST00000578773 NFKBIEO00221 500 aa15.88■□□□□ 0.13
GGA3-206ENST00000578773 FKBP8Q14318 412 aa15.88■□□□□ 0.13
GGA3-206ENST00000578773 CHADLQ6NUI6 762 aa15.88■□□□□ 0.13
GGA3-206ENST00000578773 KIF20BQ96Q89 1820 aa15.87■□□□□ 0.13
GGA3-206ENST00000578773 PASKQ96RG2 1323 aa15.87■□□□□ 0.13
GGA3-206ENST00000578773 LTBP1Q14766 1721 aa15.86■□□□□ 0.13
GGA3-206ENST00000578773 ADAMTSL1Q8N6G6 1762 aa15.86■□□□□ 0.13
GGA3-206ENST00000578773 HMGB2P26583 209 aaKnown RBP15.86■□□□□ 0.13
GGA3-206ENST00000578773 NKX1-1Q15270 411 aaPredicted RBP15.86■□□□□ 0.13
GGA3-206ENST00000578773 HSP90AB2PQ58FF8 381 aa15.86■□□□□ 0.13
GGA3-206ENST00000578773 TMOD3Q9NYL9 352 aa15.86■□□□□ 0.13
GGA3-206ENST00000578773 ROCK2O75116 1388 aaKnown RBP15.86■□□□□ 0.13
GGA3-206ENST00000578773 RFC4P35249 363 aa15.85■□□□□ 0.13
GGA3-206ENST00000578773 COG3Q96JB2 828 aa15.85■□□□□ 0.13
GGA3-206ENST00000578773 SMG6Q86US8 1419 aaKnown RBP15.85■□□□□ 0.13
GGA3-206ENST00000578773 SCN4AP35499 1836 aa15.84■□□□□ 0.13
GGA3-206ENST00000578773 POLRMTO00411 1230 aaKnown RBP15.83■□□□□ 0.12
GGA3-206ENST00000578773 RPS6KA4O75676 772 aa15.83■□□□□ 0.12
GGA3-206ENST00000578773 L3MBTL2Q969R5 705 aa15.83■□□□□ 0.12
GGA3-206ENST00000578773 NCAPD2Q15021 1401 aa15.83■□□□□ 0.12
GGA3-206ENST00000578773 CFAP44Q96MT7 982 aa15.82■□□□□ 0.12
GGA3-206ENST00000578773 RBM42Q9BTD8 480 aaKnown RBP15.82■□□□□ 0.12
GGA3-206ENST00000578773 CNTNAP4Q9C0A0 1308 aa15.82■□□□□ 0.12
GGA3-206ENST00000578773 CARMIL3Q8ND23 1372 aa15.82■□□□□ 0.12
GGA3-206ENST00000578773 INSRP06213 1382 aa15.81■□□□□ 0.12
GGA3-206ENST00000578773 ADRA2BP18089 450 aa15.81■□□□□ 0.12
GGA3-206ENST00000578773 USP42Q9H9J4 1324 aaKnown RBP15.81■□□□□ 0.12
GGA3-206ENST00000578773 TSKSQ9UJT2 592 aa15.81■□□□□ 0.12
GGA3-206ENST00000578773 ANKRD26Q9UPS8 1709 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms