RNA–Protein interactions for RNA: ENST00000578681.5

DDX42-208, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX42, Length 4,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-208ENST00000578681 CEP85Q6P2H3 762 aa20.33■□□□□ 0.84
DDX42-208ENST00000578681 ANKRD44Q8N8A2 993 aa20.32■□□□□ 0.84
DDX42-208ENST00000578681 MSH6P52701 1360 aa20.32■□□□□ 0.84
DDX42-208ENST00000578681 ZNF853P0CG23 659 aa20.32■□□□□ 0.84
DDX42-208ENST00000578681 ANP32BQ92688 251 aaKnown RBP20.32■□□□□ 0.84
DDX42-208ENST00000578681 CPSF1Q10570 1443 aaKnown RBP20.31■□□□□ 0.84
DDX42-208ENST00000578681 JARID2Q92833 1246 aaPredicted RBP20.31■□□□□ 0.84
DDX42-208ENST00000578681 LRRC7Q96NW7 1537 aa20.31■□□□□ 0.84
DDX42-208ENST00000578681 SYTL4Q96C24 671 aaPredicted RBP20.31■□□□□ 0.84
DDX42-208ENST00000578681 PRDM11Q9NQV5 511 aa20.31■□□□□ 0.84
DDX42-208ENST00000578681 KCNQ3O43525 872 aa20.3■□□□□ 0.84
DDX42-208ENST00000578681 CDK11BP21127 795 aaKnown RBP20.3■□□□□ 0.84
DDX42-208ENST00000578681 DDX58O95786 925 aaKnown RBP20.3■□□□□ 0.84
DDX42-208ENST00000578681 IFIT2P09913 472 aaKnown RBP20.3■□□□□ 0.84
DDX42-208ENST00000578681 TOM1L2Q6ZVM7 507 aa20.3■□□□□ 0.84
DDX42-208ENST00000578681 IP6K1Q92551 441 aa20.3■□□□□ 0.84
DDX42-208ENST00000578681 NAP1L2Q9ULW6 460 aaPredicted RBP20.29■□□□□ 0.84
DDX42-208ENST00000578681 NEK4P51957 841 aa20.29■□□□□ 0.84
DDX42-208ENST00000578681 SIRT2Q8IXJ6 389 aa20.29■□□□□ 0.84
DDX42-208ENST00000578681 AGLP35573 1532 aa20.29■□□□□ 0.84
DDX42-208ENST00000578681 ADAMTS13Q76LX8 1427 aa20.29■□□□□ 0.84
DDX42-208ENST00000578681 DCTPP1Q9H773 170 aa20.29■□□□□ 0.84
DDX42-208ENST00000578681 IQSEC2Q5JU85 1478 aa20.28■□□□□ 0.84
DDX42-208ENST00000578681 MYO3AQ8NEV4 1616 aa20.28■□□□□ 0.84
DDX42-208ENST00000578681 SDSP20132 328 aa20.28■□□□□ 0.84
DDX42-208ENST00000578681 PLEKHM2Q8IWE5 1019 aa20.27■□□□□ 0.84
DDX42-208ENST00000578681 FGD1P98174 961 aa20.27■□□□□ 0.84
DDX42-208ENST00000578681 G3BP1Q13283 466 aaKnown RBP eCLIP20.27■□□□□ 0.848e-7■■□□□ 13.3
DDX42-208ENST00000578681 DNAAF4Q8WXU2 420 aa20.27■□□□□ 0.84
DDX42-208ENST00000578681 DIAPH3Q9NSV4 1193 aa20.27■□□□□ 0.84
DDX42-208ENST00000578681 ABCC4O15439 1325 aa20.27■□□□□ 0.83
DDX42-208ENST00000578681 PTCD1O75127 700 aaKnown RBP20.26■□□□□ 0.83
DDX42-208ENST00000578681 PPP1R42Q7Z4L9 355 aa20.26■□□□□ 0.83
DDX42-208ENST00000578681 CDK12Q9NYV4 1490 aaPredicted RBP20.26■□□□□ 0.83
DDX42-208ENST00000578681 MAP3K5Q99683 1374 aa20.26■□□□□ 0.83
DDX42-208ENST00000578681 PIK3R4Q99570 1358 aa20.25■□□□□ 0.83
DDX42-208ENST00000578681 TTC22Q5TAA0 569 aa20.25■□□□□ 0.83
DDX42-208ENST00000578681 CLASRPQ8N2M8 674 aaKnown RBP20.25■□□□□ 0.83
DDX42-208ENST00000578681 GPATCH3Q96I76 525 aa20.25■□□□□ 0.83
DDX42-208ENST00000578681 MX1P20591 662 aa20.25■□□□□ 0.83
DDX42-208ENST00000578681 CABP4P57796 275 aa20.25■□□□□ 0.83
DDX42-208ENST00000578681 IFT172Q9UG01 1749 aa20.25■□□□□ 0.83
DDX42-208ENST00000578681 USP19O94966 1318 aa20.24■□□□□ 0.83
DDX42-208ENST00000578681 GOLGA6L3A6NEY3 463 aa20.24■□□□□ 0.83
DDX42-208ENST00000578681 MAP3K2Q9Y2U5 619 aa20.24■□□□□ 0.83
DDX42-208ENST00000578681 ERC2O15083 957 aa20.24■□□□□ 0.83
DDX42-208ENST00000578681 AMOTQ4VCS5 1084 aa20.24■□□□□ 0.83
DDX42-208ENST00000578681 PTPRUQ92729 1446 aa20.24■□□□□ 0.83
DDX42-208ENST00000578681 C19orf44Q9H6X5 657 aa20.23■□□□□ 0.83
DDX42-208ENST00000578681 AEBP2Q6ZN18 517 aaPredicted RBP20.23■□□□□ 0.83
DDX42-208ENST00000578681 PNMA6EA0A0J9YXQ4 647 aa20.23■□□□□ 0.83
DDX42-208ENST00000578681 K7ELQ4 463 aaPredicted RBP20.23■□□□□ 0.83
DDX42-208ENST00000578681 DDX49Q9Y6V7 483 aaKnown RBP20.23■□□□□ 0.83
DDX42-208ENST00000578681 UPF3BQ9BZI7 483 aaKnown RBP20.22■□□□□ 0.83
DDX42-208ENST00000578681 SPG7Q9UQ90 795 aa20.22■□□□□ 0.83
DDX42-208ENST00000578681 HDAC5Q9UQL6 1122 aa20.22■□□□□ 0.83
DDX42-208ENST00000578681 SPATA31D1Q6ZQQ2 1576 aa20.22■□□□□ 0.83
DDX42-208ENST00000578681 TRAK2O60296 914 aa20.21■□□□□ 0.83
DDX42-208ENST00000578681 CWF19L2Q2TBE0 894 aaKnown RBP20.21■□□□□ 0.83
DDX42-208ENST00000578681 DBF4Q9UBU7 674 aaPredicted RBP20.21■□□□□ 0.83
DDX42-208ENST00000578681 KAT6BQ8WYB5 2073 aa20.21■□□□□ 0.83
DDX42-208ENST00000578681 MED14O60244 1454 aa20.21■□□□□ 0.83
DDX42-208ENST00000578681 IGSF1Q8N6C5 1336 aa20.21■□□□□ 0.83
DDX42-208ENST00000578681 NFATC2IPQ8NCF5 419 aa20.21■□□□□ 0.83
DDX42-208ENST00000578681 TRIM44Q96DX7 344 aaPredicted RBP20.21■□□□□ 0.83
DDX42-208ENST00000578681 MCM4P33991 863 aa20.2■□□□□ 0.82
DDX42-208ENST00000578681 PDE1AP54750 535 aa20.2■□□□□ 0.82
DDX42-208ENST00000578681 MCTP1Q6DN14 999 aa20.2■□□□□ 0.82
DDX42-208ENST00000578681 CWC27Q6UX04 472 aaKnown RBP20.2■□□□□ 0.82
DDX42-208ENST00000578681 AKAP4Q5JQC9 854 aa20.2■□□□□ 0.82
DDX42-208ENST00000578681 ARHGEF10O15013 1369 aa20.2■□□□□ 0.82
DDX42-208ENST00000578681 RABEP1Q15276 862 aa20.19■□□□□ 0.82
DDX42-208ENST00000578681 LARP6Q9BRS8 491 aaKnown RBP20.19■□□□□ 0.82
DDX42-208ENST00000578681 DDX11L8A8MPP1 907 aa20.19■□□□□ 0.82
DDX42-208ENST00000578681 HTATSF1O43719 755 aaKnown RBP20.18■□□□□ 0.82
DDX42-208ENST00000578681 TAF7LQ5H9L4 462 aa20.18■□□□□ 0.82
DDX42-208ENST00000578681 ATP5J2-PTCD1G3V325 749 aa20.18■□□□□ 0.82
DDX42-208ENST00000578681 L1TD1Q5T7N2 865 aaKnown RBP20.18■□□□□ 0.82
DDX42-208ENST00000578681 GORABQ5T7V8 394 aa20.18■□□□□ 0.82
DDX42-208ENST00000578681 NEUROD6Q96NK8 337 aa20.18■□□□□ 0.82
DDX42-208ENST00000578681 CCDC85AQ96PX6 553 aaPredicted RBP20.18■□□□□ 0.82
DDX42-208ENST00000578681 PA2G4Q9UQ80 394 aaKnown RBP20.18■□□□□ 0.82
DDX42-208ENST00000578681 GSPT1P15170 499 aaKnown RBP20.18■□□□□ 0.82
DDX42-208ENST00000578681 AACSQ86V21 672 aa20.18■□□□□ 0.82
DDX42-208ENST00000578681 MYD88Q99836 296 aa20.18■□□□□ 0.82
DDX42-208ENST00000578681 NBPF7P0C2Y1 421 aaPredicted RBP20.17■□□□□ 0.82
DDX42-208ENST00000578681 HSP90AB4PQ58FF6 505 aa20.17■□□□□ 0.82
DDX42-208ENST00000578681 COL3A1P02461 1466 aaPredicted RBP20.17■□□□□ 0.82
DDX42-208ENST00000578681 MAP2P11137 1827 aaKnown RBP20.17■□□□□ 0.82
DDX42-208ENST00000578681 CCDC8Q9H0W5 538 aaPredicted RBP20.16■□□□□ 0.82
DDX42-208ENST00000578681 DLC1Q96QB1 1528 aa20.16■□□□□ 0.82
DDX42-208ENST00000578681 PRAMEF22A3QJZ6 481 aa20.16■□□□□ 0.82
DDX42-208ENST00000578681 RNMTO43148 476 aaKnown RBP20.16■□□□□ 0.82
DDX42-208ENST00000578681 ATP8B2P98198 1209 aa20.16■□□□□ 0.82
DDX42-208ENST00000578681 PLCB2Q00722 1185 aa20.16■□□□□ 0.82
DDX42-208ENST00000578681 CNTROBQ8N137 903 aa20.15■□□□□ 0.82
DDX42-208ENST00000578681 RTL1A6NKG5 1358 aa20.15■□□□□ 0.82
DDX42-208ENST00000578681 CADPS2Q86UW7 1296 aa20.14■□□□□ 0.82
DDX42-208ENST00000578681 KIAA0232Q92628 1395 aa20.14■□□□□ 0.81
DDX42-208ENST00000578681 BRPF1P55201 1214 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms