RNA–Protein interactions for RNA: ENST00000578681.5

DDX42-208, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX42, Length 4,337 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-208ENST00000578681 CEP85Q6P2H3 762 aa20.33■□□□□ 0.84
DDX42-208ENST00000578681 ANKRD44Q8N8A2 993 aa20.32■□□□□ 0.84
DDX42-208ENST00000578681 MSH6P52701 1360 aa20.32■□□□□ 0.84
DDX42-208ENST00000578681 ZNF853P0CG23 659 aa20.32■□□□□ 0.84
DDX42-208ENST00000578681 ANP32BQ92688 251 aaKnown RBP20.32■□□□□ 0.84
DDX42-208ENST00000578681 CPSF1Q10570 1443 aaKnown RBP20.31■□□□□ 0.84
DDX42-208ENST00000578681 JARID2Q92833 1246 aaPredicted RBP20.31■□□□□ 0.84
DDX42-208ENST00000578681 LRRC7Q96NW7 1537 aa20.31■□□□□ 0.84
DDX42-208ENST00000578681 SYTL4Q96C24 671 aaPredicted RBP20.31■□□□□ 0.84
DDX42-208ENST00000578681 PRDM11Q9NQV5 511 aa20.31■□□□□ 0.84
DDX42-208ENST00000578681 KCNQ3O43525 872 aa20.3■□□□□ 0.84
DDX42-208ENST00000578681 CDK11BP21127 795 aaKnown RBP20.3■□□□□ 0.84
DDX42-208ENST00000578681 DDX58O95786 925 aaKnown RBP20.3■□□□□ 0.84
DDX42-208ENST00000578681 IFIT2P09913 472 aaKnown RBP20.3■□□□□ 0.84
DDX42-208ENST00000578681 TOM1L2Q6ZVM7 507 aa20.3■□□□□ 0.84
DDX42-208ENST00000578681 IP6K1Q92551 441 aa20.3■□□□□ 0.84
DDX42-208ENST00000578681 NAP1L2Q9ULW6 460 aaPredicted RBP20.29■□□□□ 0.84
DDX42-208ENST00000578681 NEK4P51957 841 aa20.29■□□□□ 0.84
DDX42-208ENST00000578681 SIRT2Q8IXJ6 389 aa20.29■□□□□ 0.84
DDX42-208ENST00000578681 AGLP35573 1532 aa20.29■□□□□ 0.84
DDX42-208ENST00000578681 ADAMTS13Q76LX8 1427 aa20.29■□□□□ 0.84
DDX42-208ENST00000578681 DCTPP1Q9H773 170 aa20.29■□□□□ 0.84
DDX42-208ENST00000578681 IQSEC2Q5JU85 1478 aa20.28■□□□□ 0.84
DDX42-208ENST00000578681 MYO3AQ8NEV4 1616 aa20.28■□□□□ 0.84
DDX42-208ENST00000578681 SDSP20132 328 aa20.28■□□□□ 0.84
DDX42-208ENST00000578681 PLEKHM2Q8IWE5 1019 aa20.27■□□□□ 0.84
DDX42-208ENST00000578681 FGD1P98174 961 aa20.27■□□□□ 0.84
DDX42-208ENST00000578681 G3BP1Q13283 466 aaKnown RBP eCLIP20.27■□□□□ 0.848e-7■■□□□ 13.3
DDX42-208ENST00000578681 DNAAF4Q8WXU2 420 aa20.27■□□□□ 0.84
DDX42-208ENST00000578681 DIAPH3Q9NSV4 1193 aa20.27■□□□□ 0.84
DDX42-208ENST00000578681 ABCC4O15439 1325 aa20.27■□□□□ 0.83
DDX42-208ENST00000578681 PTCD1O75127 700 aaKnown RBP20.26■□□□□ 0.83
DDX42-208ENST00000578681 PPP1R42Q7Z4L9 355 aa20.26■□□□□ 0.83
DDX42-208ENST00000578681 CDK12Q9NYV4 1490 aaPredicted RBP20.26■□□□□ 0.83
DDX42-208ENST00000578681 MAP3K5Q99683 1374 aa20.26■□□□□ 0.83
DDX42-208ENST00000578681 PIK3R4Q99570 1358 aa20.25■□□□□ 0.83
DDX42-208ENST00000578681 TTC22Q5TAA0 569 aa20.25■□□□□ 0.83
DDX42-208ENST00000578681 CLASRPQ8N2M8 674 aaKnown RBP20.25■□□□□ 0.83
DDX42-208ENST00000578681 GPATCH3Q96I76 525 aa20.25■□□□□ 0.83
DDX42-208ENST00000578681 MX1P20591 662 aa20.25■□□□□ 0.83
DDX42-208ENST00000578681 CABP4P57796 275 aa20.25■□□□□ 0.83
DDX42-208ENST00000578681 IFT172Q9UG01 1749 aa20.25■□□□□ 0.83
DDX42-208ENST00000578681 USP19O94966 1318 aa20.24■□□□□ 0.83
DDX42-208ENST00000578681 GOLGA6L3A6NEY3 463 aa20.24■□□□□ 0.83
DDX42-208ENST00000578681 MAP3K2Q9Y2U5 619 aa20.24■□□□□ 0.83
DDX42-208ENST00000578681 ERC2O15083 957 aa20.24■□□□□ 0.83
DDX42-208ENST00000578681 AMOTQ4VCS5 1084 aa20.24■□□□□ 0.83
DDX42-208ENST00000578681 PTPRUQ92729 1446 aa20.24■□□□□ 0.83
DDX42-208ENST00000578681 C19orf44Q9H6X5 657 aa20.23■□□□□ 0.83
DDX42-208ENST00000578681 AEBP2Q6ZN18 517 aaPredicted RBP20.23■□□□□ 0.83
DDX42-208ENST00000578681 PNMA6EA0A0J9YXQ4 647 aa20.23■□□□□ 0.83
DDX42-208ENST00000578681 K7ELQ4 463 aaPredicted RBP20.23■□□□□ 0.83
DDX42-208ENST00000578681 DDX49Q9Y6V7 483 aaKnown RBP20.23■□□□□ 0.83
DDX42-208ENST00000578681 UPF3BQ9BZI7 483 aaKnown RBP20.22■□□□□ 0.83
DDX42-208ENST00000578681 SPG7Q9UQ90 795 aa20.22■□□□□ 0.83
DDX42-208ENST00000578681 HDAC5Q9UQL6 1122 aa20.22■□□□□ 0.83
DDX42-208ENST00000578681 SPATA31D1Q6ZQQ2 1576 aa20.22■□□□□ 0.83
DDX42-208ENST00000578681 TRAK2O60296 914 aa20.21■□□□□ 0.83
DDX42-208ENST00000578681 CWF19L2Q2TBE0 894 aaKnown RBP20.21■□□□□ 0.83
DDX42-208ENST00000578681 DBF4Q9UBU7 674 aaPredicted RBP20.21■□□□□ 0.83
DDX42-208ENST00000578681 KAT6BQ8WYB5 2073 aa20.21■□□□□ 0.83
DDX42-208ENST00000578681 MED14O60244 1454 aa20.21■□□□□ 0.83
DDX42-208ENST00000578681 IGSF1Q8N6C5 1336 aa20.21■□□□□ 0.83
DDX42-208ENST00000578681 NFATC2IPQ8NCF5 419 aa20.21■□□□□ 0.83
DDX42-208ENST00000578681 TRIM44Q96DX7 344 aaPredicted RBP20.21■□□□□ 0.83
DDX42-208ENST00000578681 MCM4P33991 863 aa20.2■□□□□ 0.82
DDX42-208ENST00000578681 PDE1AP54750 535 aa20.2■□□□□ 0.82
DDX42-208ENST00000578681 MCTP1Q6DN14 999 aa20.2■□□□□ 0.82
DDX42-208ENST00000578681 CWC27Q6UX04 472 aaKnown RBP20.2■□□□□ 0.82
DDX42-208ENST00000578681 AKAP4Q5JQC9 854 aa20.2■□□□□ 0.82
DDX42-208ENST00000578681 ARHGEF10O15013 1369 aa20.2■□□□□ 0.82
DDX42-208ENST00000578681 RABEP1Q15276 862 aa20.19■□□□□ 0.82
DDX42-208ENST00000578681 LARP6Q9BRS8 491 aaKnown RBP20.19■□□□□ 0.82
DDX42-208ENST00000578681 DDX11L8A8MPP1 907 aa20.19■□□□□ 0.82
DDX42-208ENST00000578681 HTATSF1O43719 755 aaKnown RBP20.18■□□□□ 0.82
DDX42-208ENST00000578681 TAF7LQ5H9L4 462 aa20.18■□□□□ 0.82
DDX42-208ENST00000578681 ATP5J2-PTCD1G3V325 749 aa20.18■□□□□ 0.82
DDX42-208ENST00000578681 L1TD1Q5T7N2 865 aaKnown RBP20.18■□□□□ 0.82
DDX42-208ENST00000578681 GORABQ5T7V8 394 aa20.18■□□□□ 0.82
DDX42-208ENST00000578681 NEUROD6Q96NK8 337 aa20.18■□□□□ 0.82
DDX42-208ENST00000578681 CCDC85AQ96PX6 553 aaPredicted RBP20.18■□□□□ 0.82
DDX42-208ENST00000578681 PA2G4Q9UQ80 394 aaKnown RBP20.18■□□□□ 0.82
DDX42-208ENST00000578681 GSPT1P15170 499 aaKnown RBP20.18■□□□□ 0.82
DDX42-208ENST00000578681 AACSQ86V21 672 aa20.18■□□□□ 0.82
DDX42-208ENST00000578681 MYD88Q99836 296 aa20.18■□□□□ 0.82
DDX42-208ENST00000578681 NBPF7P0C2Y1 421 aaPredicted RBP20.17■□□□□ 0.82
DDX42-208ENST00000578681 HSP90AB4PQ58FF6 505 aa20.17■□□□□ 0.82
DDX42-208ENST00000578681 COL3A1P02461 1466 aaPredicted RBP20.17■□□□□ 0.82
DDX42-208ENST00000578681 MAP2P11137 1827 aaKnown RBP20.17■□□□□ 0.82
DDX42-208ENST00000578681 CCDC8Q9H0W5 538 aaPredicted RBP20.16■□□□□ 0.82
DDX42-208ENST00000578681 DLC1Q96QB1 1528 aa20.16■□□□□ 0.82
DDX42-208ENST00000578681 PRAMEF22A3QJZ6 481 aa20.16■□□□□ 0.82
DDX42-208ENST00000578681 RNMTO43148 476 aaKnown RBP20.16■□□□□ 0.82
DDX42-208ENST00000578681 ATP8B2P98198 1209 aa20.16■□□□□ 0.82
DDX42-208ENST00000578681 PLCB2Q00722 1185 aa20.16■□□□□ 0.82
DDX42-208ENST00000578681 CNTROBQ8N137 903 aa20.15■□□□□ 0.82
DDX42-208ENST00000578681 RTL1A6NKG5 1358 aa20.15■□□□□ 0.82
DDX42-208ENST00000578681 CADPS2Q86UW7 1296 aa20.14■□□□□ 0.82
DDX42-208ENST00000578681 KIAA0232Q92628 1395 aa20.14■□□□□ 0.81
DDX42-208ENST00000578681 BRPF1P55201 1214 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms