RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 TMOD3Q9NYL9 352 aa11.43□□□□□ -0.58
PPP4R1-210ENST00000578557 KIF20BQ96Q89 1820 aa11.42□□□□□ -0.58
PPP4R1-210ENST00000578557 MEGF6O75095 1541 aa11.42□□□□□ -0.58
PPP4R1-210ENST00000578557 U2SURPO15042 1029 aaKnown RBP11.42□□□□□ -0.58
PPP4R1-210ENST00000578557 KCNQ2O43526 872 aa11.42□□□□□ -0.58
PPP4R1-210ENST00000578557 EVX2Q03828 476 aa11.42□□□□□ -0.58
PPP4R1-210ENST00000578557 ZNF530Q6P9A1 599 aaPredicted RBP11.42□□□□□ -0.58
PPP4R1-210ENST00000578557 SLC16A10Q8TF71 515 aa11.42□□□□□ -0.58
PPP4R1-210ENST00000578557 ACSBG1Q96GR2 724 aa11.42□□□□□ -0.58
PPP4R1-210ENST00000578557 MYBBP1AQ9BQG0 1328 aaKnown RBP11.41□□□□□ -0.58
PPP4R1-210ENST00000578557 GSE1Q14687 1217 aa11.41□□□□□ -0.58
PPP4R1-210ENST00000578557 DCAF8Q5TAQ9 597 aa11.41□□□□□ -0.58
PPP4R1-210ENST00000578557 U2AF1L5P0DN76 240 aaPredicted RBP11.4□□□□□ -0.58
PPP4R1-210ENST00000578557 CABP4P57796 275 aa11.4□□□□□ -0.58
PPP4R1-210ENST00000578557 U2AF1Q01081 240 aaKnown RBP eCLIP11.4□□□□□ -0.58
PPP4R1-210ENST00000578557 SLC15A2Q16348 729 aa11.4□□□□□ -0.58
PPP4R1-210ENST00000578557 MPRIPQ6WCQ1 1025 aa11.4□□□□□ -0.58
PPP4R1-210ENST00000578557 LRRC37A3O60309 1634 aa11.39□□□□□ -0.59
PPP4R1-210ENST00000578557 LTN1O94822 1766 aa11.39□□□□□ -0.59
PPP4R1-210ENST00000578557 PIGBQ92521 554 aa11.39□□□□□ -0.59
PPP4R1-210ENST00000578557 GNAT3A8MTJ3 354 aa11.38□□□□□ -0.59
PPP4R1-210ENST00000578557 ZNF579Q8NAF0 562 aaKnown RBP11.38□□□□□ -0.59
PPP4R1-210ENST00000578557 RTF1Q92541 710 aaKnown RBP11.38□□□□□ -0.59
PPP4R1-210ENST00000578557 TEX13AQ9BXU3 409 aaPredicted RBP11.38□□□□□ -0.59
PPP4R1-210ENST00000578557 PRKRIP1Q9H875 184 aaPredicted RBP11.38□□□□□ -0.59
PPP4R1-210ENST00000578557 CCNL1Q9UK58 526 aaPredicted RBP11.38□□□□□ -0.59
PPP4R1-210ENST00000578557 RGPD1P0DJD0 1748 aa11.38□□□□□ -0.59
PPP4R1-210ENST00000578557 HMOX1P09601 288 aa11.37□□□□□ -0.59
PPP4R1-210ENST00000578557 VSIG10Q8N0Z9 540 aa11.37□□□□□ -0.59
PPP4R1-210ENST00000578557 ANKRD26Q9UPS8 1709 aa11.37□□□□□ -0.59
PPP4R1-210ENST00000578557 PEAK1Q9H792 1746 aa11.36□□□□□ -0.59
PPP4R1-210ENST00000578557 ANP32CO43423 234 aa11.36□□□□□ -0.59
PPP4R1-210ENST00000578557 LMOD3Q0VAK6 560 aa11.36□□□□□ -0.59
PPP4R1-210ENST00000578557 R3HDM1Q15032 1099 aaKnown RBP11.36□□□□□ -0.59
PPP4R1-210ENST00000578557 MTHFSDQ2M296 383 aaKnown RBP11.36□□□□□ -0.59
PPP4R1-210ENST00000578557 RC3H1Q5TC82 1133 aaKnown RBP11.36□□□□□ -0.59
PPP4R1-210ENST00000578557 AEBP1Q8IUX7 1158 aa11.36□□□□□ -0.59
PPP4R1-210ENST00000578557 PNISRQ8TF01 805 aaKnown RBP11.36□□□□□ -0.59
PPP4R1-210ENST00000578557 RSPH6AQ9H0K4 717 aa11.36□□□□□ -0.59
PPP4R1-210ENST00000578557 SLC52A2Q9HAB3 445 aa11.36□□□□□ -0.59
PPP4R1-210ENST00000578557 SPON1Q9HCB6 807 aa11.36□□□□□ -0.59
PPP4R1-210ENST00000578557 CIZ1Q9ULV3 898 aaPredicted RBP11.36□□□□□ -0.59
PPP4R1-210ENST00000578557 EP400Q96L91 3159 aa11.35□□□□□ -0.59
PPP4R1-210ENST00000578557 LOC102724428A0A0B4J2F2 783 aa11.35□□□□□ -0.59
PPP4R1-210ENST00000578557 RNMTO43148 476 aaKnown RBP11.35□□□□□ -0.59
PPP4R1-210ENST00000578557 SIK1P57059 783 aa11.35□□□□□ -0.59
PPP4R1-210ENST00000578557 TEFQ10587 303 aa11.35□□□□□ -0.59
PPP4R1-210ENST00000578557 NFATC2IPQ8NCF5 419 aa11.35□□□□□ -0.59
PPP4R1-210ENST00000578557 BABAM1Q9NWV8 329 aa11.35□□□□□ -0.59
PPP4R1-210ENST00000578557 TFCP2L1Q9NZI6 479 aa11.35□□□□□ -0.59
PPP4R1-210ENST00000578557 BRWD3Q6RI45 1802 aa11.35□□□□□ -0.59
PPP4R1-210ENST00000578557 PALLDQ8WX93 1383 aa11.34□□□□□ -0.59
PPP4R1-210ENST00000578557 PRKAR2BP31323 418 aa11.34□□□□□ -0.59
PPP4R1-210ENST00000578557 CNGB1Q14028 1251 aaPredicted RBP11.34□□□□□ -0.59
PPP4R1-210ENST00000578557 WDR43Q15061 677 aaKnown RBP eCLIP11.34□□□□□ -0.59
PPP4R1-210ENST00000578557 PTF1AQ7RTS3 328 aa11.34□□□□□ -0.59
PPP4R1-210ENST00000578557 ATG3Q9NT62 314 aa11.34□□□□□ -0.59
PPP4R1-210ENST00000578557 MAPK8IP3Q9UPT6 1336 aa11.34□□□□□ -0.59
PPP4R1-210ENST00000578557 SSFA2P28290 1259 aa11.33□□□□□ -0.6
PPP4R1-210ENST00000578557 CHMP4AQ9BY43 222 aa11.33□□□□□ -0.6
PPP4R1-210ENST00000578557 MTFR1LQ9H019 292 aa11.33□□□□□ -0.6
PPP4R1-210ENST00000578557 LRRC4BQ9NT99 713 aa11.33□□□□□ -0.6
PPP4R1-210ENST00000578557 MAP3K5Q99683 1374 aa11.32□□□□□ -0.6
PPP4R1-210ENST00000578557 ATP6V1AP38606 617 aa11.32□□□□□ -0.6
PPP4R1-210ENST00000578557 TTC5Q8N0Z6 440 aa11.32□□□□□ -0.6
PPP4R1-210ENST00000578557 NGEFQ8N5V2 710 aa11.32□□□□□ -0.6
PPP4R1-210ENST00000578557 COL3A1P02461 1466 aaPredicted RBP11.32□□□□□ -0.6
PPP4R1-210ENST00000578557 MAP2P11137 1827 aaKnown RBP11.31□□□□□ -0.6
PPP4R1-210ENST00000578557 POLD1P28340 1107 aa11.31□□□□□ -0.6
PPP4R1-210ENST00000578557 CLCN6P51797 869 aa11.31□□□□□ -0.6
PPP4R1-210ENST00000578557 SP7Q8TDD2 431 aaPredicted RBP11.31□□□□□ -0.6
PPP4R1-210ENST00000578557 AK7Q96M32 723 aa11.31□□□□□ -0.6
PPP4R1-210ENST00000578557 PLEKHF1Q96S99 279 aa11.31□□□□□ -0.6
PPP4R1-210ENST00000578557 ASAP1Q9ULH1 1129 aa11.31□□□□□ -0.6
PPP4R1-210ENST00000578557 RGPD3A6NKT7 1758 aaPredicted RBP11.31□□□□□ -0.6
PPP4R1-210ENST00000578557 RGPD4Q7Z3J3 1758 aa11.31□□□□□ -0.6
PPP4R1-210ENST00000578557 RGPD5Q99666 1765 aa11.31□□□□□ -0.6
PPP4R1-210ENST00000578557 STARD3NLO95772 234 aa11.3□□□□□ -0.6
PPP4R1-210ENST00000578557 CALD1Q05682 793 aaKnown RBP11.3□□□□□ -0.6
PPP4R1-210ENST00000578557 TAF7Q15545 349 aaPredicted RBP11.3□□□□□ -0.6
PPP4R1-210ENST00000578557 NFE2L2Q16236 605 aa11.3□□□□□ -0.6
PPP4R1-210ENST00000578557 RUNDC1Q96C34 613 aa11.3□□□□□ -0.6
PPP4R1-210ENST00000578557 PHF12Q96QT6 1004 aa11.3□□□□□ -0.6
PPP4R1-210ENST00000578557 CEMIPQ8WUJ3 1361 aa11.29□□□□□ -0.6
PPP4R1-210ENST00000578557 PSDA5PKW4 1024 aaPredicted RBP11.29□□□□□ -0.6
PPP4R1-210ENST00000578557 TRAPPC3LQ5T215 181 aa11.29□□□□□ -0.6
PPP4R1-210ENST00000578557 ZNF790Q6PG37 636 aa11.29□□□□□ -0.6
PPP4R1-210ENST00000578557 NPM2Q86SE8 214 aaKnown RBP11.29□□□□□ -0.6
PPP4R1-210ENST00000578557 IL17REQ8NFR9 667 aa11.29□□□□□ -0.6
PPP4R1-210ENST00000578557 PHACTR3Q96KR7 559 aa11.29□□□□□ -0.6
PPP4R1-210ENST00000578557 LGR6Q9HBX8 967 aa11.29□□□□□ -0.6
PPP4R1-210ENST00000578557 RTCBQ9Y3I0 505 aaKnown RBP11.29□□□□□ -0.6
PPP4R1-210ENST00000578557 NHSQ6T4R5 1651 aa11.29□□□□□ -0.6
PPP4R1-210ENST00000578557 CNTNAP4Q9C0A0 1308 aa11.29□□□□□ -0.6
PPP4R1-210ENST00000578557 BTBD11A6QL63 1104 aa11.28□□□□□ -0.6
PPP4R1-210ENST00000578557 RPS6KA4O75676 772 aa11.28□□□□□ -0.6
PPP4R1-210ENST00000578557 NLGN1Q8N2Q7 840 aa11.28□□□□□ -0.6
PPP4R1-210ENST00000578557 FMNL2Q96PY5 1086 aa11.28□□□□□ -0.6
PPP4R1-210ENST00000578557 PPP1R1BQ9UD71 204 aaPredicted RBP11.28□□□□□ -0.6
PPP4R1-210ENST00000578557 WNK3Q9BYP7 1800 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms