RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 NCBP3Q53F19 620 aaKnown RBP15.86■□□□□ 0.13
IFT20-207ENST00000578547 NFATC2IPQ8NCF5 419 aa15.86■□□□□ 0.13
IFT20-207ENST00000578547 SLC52A2Q9HAB3 445 aa15.86■□□□□ 0.13
IFT20-207ENST00000578547 ITGB4P16144 1822 aa15.86■□□□□ 0.13
IFT20-207ENST00000578547 SBF2Q86WG5 1849 aa15.85■□□□□ 0.13
IFT20-207ENST00000578547 ZBED9Q6R2W3 1325 aa15.85■□□□□ 0.13
IFT20-207ENST00000578547 EP400Q96L91 3159 aa15.85■□□□□ 0.13
IFT20-207ENST00000578547 SIPA1L3O60292 1781 aaPredicted RBP15.85■□□□□ 0.13
IFT20-207ENST00000578547 APBA3O96018 575 aa15.84■□□□□ 0.13
IFT20-207ENST00000578547 CCDC125Q86Z20 511 aa15.84■□□□□ 0.13
IFT20-207ENST00000578547 ZNF521Q96K83 1311 aa15.84■□□□□ 0.13
IFT20-207ENST00000578547 WDR63Q8IWG1 891 aa15.83■□□□□ 0.12
IFT20-207ENST00000578547 MIS18AQ9NYP9 233 aa15.83■□□□□ 0.12
IFT20-207ENST00000578547 BTBD11A6QL63 1104 aa15.82■□□□□ 0.12
IFT20-207ENST00000578547 GOLGA2Q08379 1002 aa15.82■□□□□ 0.12
IFT20-207ENST00000578547 SF3B2Q13435 895 aaKnown RBP15.82■□□□□ 0.12
IFT20-207ENST00000578547 TAF7Q15545 349 aaPredicted RBP15.82■□□□□ 0.12
IFT20-207ENST00000578547 TSPYL4Q9UJ04 414 aa15.82■□□□□ 0.12
IFT20-207ENST00000578547 ASAP1Q9ULH1 1129 aa15.82■□□□□ 0.12
IFT20-207ENST00000578547 BTAF1O14981 1849 aa15.82■□□□□ 0.12
IFT20-207ENST00000578547 SLC39A6Q13433 755 aa15.81■□□□□ 0.12
IFT20-207ENST00000578547 IL16Q14005 1332 aa15.81■□□□□ 0.12
IFT20-207ENST00000578547 ATG3Q9NT62 314 aa15.81■□□□□ 0.12
IFT20-207ENST00000578547 IFT57Q9NWB7 429 aa15.81■□□□□ 0.12
IFT20-207ENST00000578547 PAPPAQ13219 1627 aa15.8■□□□□ 0.12
IFT20-207ENST00000578547 GNAI1P63096 354 aa15.8■□□□□ 0.12
IFT20-207ENST00000578547 DEFB132Q7Z7B7 95 aa15.8■□□□□ 0.12
IFT20-207ENST00000578547 TSR2Q969E8 191 aaKnown RBP15.8■□□□□ 0.12
IFT20-207ENST00000578547 CDCA7LQ96GN5 454 aa15.8■□□□□ 0.12
IFT20-207ENST00000578547 SPINK5Q9NQ38 1064 aaPredicted RBP15.8■□□□□ 0.12
IFT20-207ENST00000578547 KDM3BQ7LBC6 1761 aa15.8■□□□□ 0.12
IFT20-207ENST00000578547 PLSCR1O15162 318 aa15.79■□□□□ 0.12
IFT20-207ENST00000578547 EN1Q05925 392 aaPredicted RBP15.79■□□□□ 0.12
IFT20-207ENST00000578547 TTC5Q8N0Z6 440 aa15.79■□□□□ 0.12
IFT20-207ENST00000578547 CFAP44Q96MT7 982 aa15.79■□□□□ 0.12
IFT20-207ENST00000578547 MBIPQ9NS73 344 aa15.79■□□□□ 0.12
IFT20-207ENST00000578547 FANCIQ9NVI1 1328 aa15.78■□□□□ 0.12
IFT20-207ENST00000578547 TNS1Q9HBL0 1735 aaKnown RBP15.78■□□□□ 0.12
IFT20-207ENST00000578547 CHL1O00533 1208 aa15.78■□□□□ 0.12
IFT20-207ENST00000578547 SOCS7O14512 581 aa15.78■□□□□ 0.12
IFT20-207ENST00000578547 KCNQ3O43525 872 aa15.78■□□□□ 0.12
IFT20-207ENST00000578547 ZNF853P0CG23 659 aa15.78■□□□□ 0.12
IFT20-207ENST00000578547 BAG6P46379 1132 aa15.78■□□□□ 0.12
IFT20-207ENST00000578547 CAMKK2Q96RR4 588 aa15.78■□□□□ 0.12
IFT20-207ENST00000578547 MYH16Q9H6N6 1097 aa15.78■□□□□ 0.12
IFT20-207ENST00000578547 E9PSI1 815 aa15.77■□□□□ 0.12
IFT20-207ENST00000578547 ZNF790Q6PG37 636 aa15.77■□□□□ 0.12
IFT20-207ENST00000578547 PROM2Q8N271 834 aa15.77■□□□□ 0.12
IFT20-207ENST00000578547 SMARCC1Q92922 1105 aaPredicted RBP15.77■□□□□ 0.12
IFT20-207ENST00000578547 PALLDQ8WX93 1383 aa15.76■□□□□ 0.11
IFT20-207ENST00000578547 PTCD1O75127 700 aaKnown RBP15.76■□□□□ 0.11
IFT20-207ENST00000578547 SLFN5Q08AF3 891 aa15.76■□□□□ 0.11
IFT20-207ENST00000578547 EZH2Q15910 746 aaKnown RBP15.76■□□□□ 0.11
IFT20-207ENST00000578547 RBM42Q9BTD8 480 aaKnown RBP15.76■□□□□ 0.11
IFT20-207ENST00000578547 BABAM1Q9NWV8 329 aa15.76■□□□□ 0.11
IFT20-207ENST00000578547 UBR2Q8IWV8 1755 aa15.75■□□□□ 0.11
IFT20-207ENST00000578547 KCPQ6ZWJ8 1503 aa15.75■□□□□ 0.11
IFT20-207ENST00000578547 KCNQ4P56696 695 aa15.74■□□□□ 0.11
IFT20-207ENST00000578547 TXNRD1Q16881 649 aa15.74■□□□□ 0.11
IFT20-207ENST00000578547 KRT24Q2M2I5 525 aa15.74■□□□□ 0.11
IFT20-207ENST00000578547 ZNF496Q96IT1 587 aaPredicted RBP15.74■□□□□ 0.11
IFT20-207ENST00000578547 LOC102724428A0A0B4J2F2 783 aa15.73■□□□□ 0.11
IFT20-207ENST00000578547 SIK1P57059 783 aa15.73■□□□□ 0.11
IFT20-207ENST00000578547 FMNL2Q96PY5 1086 aa15.73■□□□□ 0.11
IFT20-207ENST00000578547 SLC4A9Q96Q91 983 aa15.73■□□□□ 0.11
IFT20-207ENST00000578547 LRRC4BQ9NT99 713 aa15.73■□□□□ 0.11
IFT20-207ENST00000578547 EIF4A1P60842 406 aaKnown RBP15.72■□□□□ 0.11
IFT20-207ENST00000578547 CCNL1Q9UK58 526 aaPredicted RBP15.72■□□□□ 0.11
IFT20-207ENST00000578547 C5P01031 1676 aa15.71■□□□□ 0.11
IFT20-207ENST00000578547 ELL2O00472 640 aaPredicted RBP15.71■□□□□ 0.11
IFT20-207ENST00000578547 EXOSC9Q06265 439 aaKnown RBP15.71■□□□□ 0.11
IFT20-207ENST00000578547 DUSP27Q5VZP5 1158 aa15.71■□□□□ 0.11
IFT20-207ENST00000578547 ATP6V1AP38606 617 aa15.7■□□□□ 0.1
IFT20-207ENST00000578547 SLC27A3Q5K4L6 730 aa15.7■□□□□ 0.1
IFT20-207ENST00000578547 TRMT2AQ8IZ69 625 aaKnown RBP15.7■□□□□ 0.1
IFT20-207ENST00000578547 C8orf58Q8NAV2 365 aa15.7■□□□□ 0.1
IFT20-207ENST00000578547 LY75O60449 1722 aa15.7■□□□□ 0.1
IFT20-207ENST00000578547 HEG1Q9ULI3 1381 aa15.7■□□□□ 0.1
IFT20-207ENST00000578547 TJP1Q07157 1748 aa15.69■□□□□ 0.1
IFT20-207ENST00000578547 PRAMEF22A3QJZ6 481 aa15.69■□□□□ 0.1
IFT20-207ENST00000578547 ITPK1Q13572 414 aa15.69■□□□□ 0.1
IFT20-207ENST00000578547 TSPYL6Q8N831 410 aa15.69■□□□□ 0.1
IFT20-207ENST00000578547 SNRPA1P09661 255 aaKnown RBP15.68■□□□□ 0.1
IFT20-207ENST00000578547 TWISTNBQ3B726 338 aaPredicted RBP15.68■□□□□ 0.1
IFT20-207ENST00000578547 DNAJC10Q8IXB1 793 aa15.68■□□□□ 0.1
IFT20-207ENST00000578547 LAMB4A4D0S4 1761 aa15.67■□□□□ 0.1
IFT20-207ENST00000578547 RGPD3A6NKT7 1758 aaPredicted RBP15.67■□□□□ 0.1
IFT20-207ENST00000578547 RGPD4Q7Z3J3 1758 aa15.67■□□□□ 0.1
IFT20-207ENST00000578547 GIGYF1O75420 1035 aaPredicted RBP15.67■□□□□ 0.1
IFT20-207ENST00000578547 VSIG10Q8N0Z9 540 aa15.67■□□□□ 0.1
IFT20-207ENST00000578547 EIF2S2P20042 333 aaKnown RBP15.66■□□□□ 0.1
IFT20-207ENST00000578547 LINC00116Q8NCU8 138 aa15.66■□□□□ 0.1
IFT20-207ENST00000578547 NECTIN2Q92692 538 aa15.66■□□□□ 0.1
IFT20-207ENST00000578547 CICQ96RK0 1608 aaPredicted RBP15.65■□□□□ 0.1
IFT20-207ENST00000578547 ZNF831Q5JPB2 1677 aa15.65■□□□□ 0.1
IFT20-207ENST00000578547 HDGFL1Q5TGJ6 251 aa15.65■□□□□ 0.1
IFT20-207ENST00000578547 USP16Q9Y5T5 823 aa15.65■□□□□ 0.1
IFT20-207ENST00000578547 TCERG1O14776 1098 aaKnown RBP15.64■□□□□ 0.09
IFT20-207ENST00000578547 CYP19A1P11511 503 aaPredicted RBP15.64■□□□□ 0.09
IFT20-207ENST00000578547 COL5A3P25940 1745 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms